Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is yfhL [H]
Identifier: 73540045
GI number: 73540045
Start: 369066
End: 369326
Strand: Direct
Name: yfhL [H]
Synonym: Reut_A0339
Alternate gene names: 73540045
Gene position: 369066-369326 (Clockwise)
Preceding gene: 73540044
Following gene: 73540052
Centisome position: 9.7
GC content: 59.77
Gene sequence:
>261_bases ATGGCGCTACTGATCACCGACGACTGCATCAACTGCGACGTTTGTGAACCCGAGTGCCCGAACGAAGCCATTTCGATGGG GCCCGAGATCTATGAAATCGACCCCAACAAGTGCACCGAGTGCGTCGGCCATTTCGATGAGCCGCAGTGCCAGCAGGTTT GCCCGGTAGCGTGCATTCCAAAGGATCCGAACCGCGTCGAGACGCATGAGGTCCTGATGCAGCGGTACCGGTTGCTGACA GCGGCCAAGCACGCGGCCTGA
Upstream 100 bases:
>100_bases GCTCGCTGAGAAAATCAGCAAACCGGAATAAAATGACGGTTTCAGACGCGTCGATCCGCGGCCAGTTCGGGCGCGGGCGC GTCCGCAGGAAGGAAACACC
Downstream 100 bases:
>100_bases GCACCGGCGCAATCGGCAGGGTACAAAAACAAAGCCCCCGTCACCGAGAGGTAACGGGGGCTTTGTTTTTGGCGGCGATG CAACGGCCGTGCGACGATGT
Product: 4Fe-4S ferredoxin, iron-sulfur binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MALLITDDCINCDVCEPECPNEAISMGPEIYEIDPNKCTECVGHFDEPQCQQVCPVACIPKDPNRVETHEVLMQRYRLLT AAKHAA
Sequences:
>Translated_86_residues MALLITDDCINCDVCEPECPNEAISMGPEIYEIDPNKCTECVGHFDEPQCQQVCPVACIPKDPNRVETHEVLMQRYRLLT AAKHAA >Mature_85_residues ALLITDDCINCDVCEPECPNEAISMGPEIYEIDPNKCTECVGHFDEPQCQQVCPVACIPKDPNRVETHEVLMQRYRLLTA AKHAA
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788914, Length=83, Percent_Identity=63.855421686747, Blast_Score=107, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9619; Mature: 9488
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 14.0 %Cys+Met (Translated Protein) 10.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 12.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLITDDCINCDVCEPECPNEAISMGPEIYEIDPNKCTECVGHFDEPQCQQVCPVACIP CEEEECCCCCCCCCCCCCCCCHHHHCCCEEEEECCHHHHHHHCCCCCCCCHHCCCEEECC KDPNRVETHEVLMQRYRLLTAAKHAA CCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALLITDDCINCDVCEPECPNEAISMGPEIYEIDPNKCTECVGHFDEPQCQQVCPVACIP EEEECCCCCCCCCCCCCCCCHHHHCCCEEEEECCHHHHHHHCCCCCCCCHHCCCEEECC KDPNRVETHEVLMQRYRLLTAAKHAA CCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]