Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73540042
Identifier: 73540042
GI number: 73540042
Start: 366249
End: 367610
Strand: Direct
Name: 73540042
Synonym: Reut_A0336
Alternate gene names: NA
Gene position: 366249-367610 (Clockwise)
Preceding gene: 73540041
Following gene: 73540043
Centisome position: 9.62
GC content: 68.65
Gene sequence:
>1362_bases ATGTCCCTGTCCGACATTACGATTCCTTCACCGCGCGCGCTGCGCCGGCTGGCGGGCGCGGCCCTGGGAGCGCTGGCGCT GCTGGCCACGCAGTGCGCGCTGGCTGCGATCCCGATCGAACACTGGACCGCGTCGACCGGCGCGCAGGTGTTCTACGTGC ACAGCCCGTCGATTCCGATGCTCGATATCAACGTCGATTTCGACGCCGGCAGCCGCTATGACCCGGCCGGCAAGGCCGGG CTCGCCACGCTCGCGGCGGCACTGCTCGACAAGGGTGCTGCCGCGCGCAACGGCCAGCCGGCCCGCGATGAGGCGCAGAT CGCCGACGCCTTTGCCGATACCGGCGCCGTCTTCGGCGGTGCGGCCGGTGGCGACCGTGGCGGCATCGGCATGCGCACGC TGACCGCGCAGCCGGAGCTCGACCAGTCCGTGGCGCTGGCCATGCAGCTGATTCAGGCACCGACCTATCCCGATGCAGTT GTCGGGCGCGAGAAGCAGCGCCTGATCAGCGCGATTCGCGAGGCCGATGCCAAGCCCGGCGTGATCGCCGACAAGGCGCT GGCCAAGGCGATGTACCCGGGCCATCCGTACGGCGTGTCGGCTACGCAGGCGTCGGTGGAATCGATCTCGCGCGATGACA TCGTCAAGTTCTGGCGGGACAACTACGGTGCGTCGCGCGCTGTGGTCACATTGATCGGCGCGATCGACCGCAAGCAGGCG GAGGCGATCGCCGAGAAGCTGACCGGCGGCCTGCCGCCGGGCAGCGCGGCCCCGGCCATGCCGCAGGTGCAGATGACTAT CCCGGCCAGCGAGCAGCGCGTGCCGCATCCGGCCCAGCAGGCGGCGGTGGTGACCGGCCAGCCGTCGATGGCGCGCGGCG ATCCCGACTATTTCGCACTGCTGGTCGGCAACTACGTGCTGGGCGGCGGGGGCTTCAGCTCGCGCCTGACCGATGAAGTG CGCGAGAAGCGCGGACTCACCTACGGTGTGGACAGCTATTTCGCGCCCTCCAAGCAGGCGGGTCCGTTCGGCATCAGCCT GCAGACCAAGAAGGAGCAGACCAACGAAGCGCTGGCGCTGGTGCGGCAGGTGCTGACCCGCTTCGTCACCGAAGGCCCGA CCGATGCCGAACTCAAGGCGGCCAAGGACAATCTCGTCAACGGCTTCCCGCTGCGTATTGACAGCAACCGCAAGCTGCTG ACGAACGTGGCCAATATCGGCTGGTACGGGCTGCCGCTGGACTATCTGGATACGTGGACGGCCCAGGTCGGCAAGGTCAC GCGCCAGCAGGTGCAGGCGGCGTTCCAGCGCCACGTTCACCCGAACGCGATGGCCACGGTGATCGTCGGCGGCCCGGAGT AA
Upstream 100 bases:
>100_bases GACGACAACCTGACCGTGGCCACGCTGTTGCCGCAGCCGATCGATCCCAACAAGCCCAAGGCCAAGGCCCCCGAAGGCCT GCGCCACTGAGGAGCCACGC
Downstream 100 bases:
>100_bases GCATGCGCCTTGTGGGGCTTGCCGCACGCAGCGCAATGGCCGGTGATGGCTGAAGCGCCGACAGGCTCTACAATCACGGC ATGAATTCGCGTACCCGATC
Product: peptidase M16, C-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSLSDITIPSPRALRRLAGAALGALALLATQCALAAIPIEHWTASTGAQVFYVHSPSIPMLDINVDFDAGSRYDPAGKAG LATLAAALLDKGAAARNGQPARDEAQIADAFADTGAVFGGAAGGDRGGIGMRTLTAQPELDQSVALAMQLIQAPTYPDAV VGREKQRLISAIREADAKPGVIADKALAKAMYPGHPYGVSATQASVESISRDDIVKFWRDNYGASRAVVTLIGAIDRKQA EAIAEKLTGGLPPGSAAPAMPQVQMTIPASEQRVPHPAQQAAVVTGQPSMARGDPDYFALLVGNYVLGGGGFSSRLTDEV REKRGLTYGVDSYFAPSKQAGPFGISLQTKKEQTNEALALVRQVLTRFVTEGPTDAELKAAKDNLVNGFPLRIDSNRKLL TNVANIGWYGLPLDYLDTWTAQVGKVTRQQVQAAFQRHVHPNAMATVIVGGPE
Sequences:
>Translated_453_residues MSLSDITIPSPRALRRLAGAALGALALLATQCALAAIPIEHWTASTGAQVFYVHSPSIPMLDINVDFDAGSRYDPAGKAG LATLAAALLDKGAAARNGQPARDEAQIADAFADTGAVFGGAAGGDRGGIGMRTLTAQPELDQSVALAMQLIQAPTYPDAV VGREKQRLISAIREADAKPGVIADKALAKAMYPGHPYGVSATQASVESISRDDIVKFWRDNYGASRAVVTLIGAIDRKQA EAIAEKLTGGLPPGSAAPAMPQVQMTIPASEQRVPHPAQQAAVVTGQPSMARGDPDYFALLVGNYVLGGGGFSSRLTDEV REKRGLTYGVDSYFAPSKQAGPFGISLQTKKEQTNEALALVRQVLTRFVTEGPTDAELKAAKDNLVNGFPLRIDSNRKLL TNVANIGWYGLPLDYLDTWTAQVGKVTRQQVQAAFQRHVHPNAMATVIVGGPE >Mature_452_residues SLSDITIPSPRALRRLAGAALGALALLATQCALAAIPIEHWTASTGAQVFYVHSPSIPMLDINVDFDAGSRYDPAGKAGL ATLAAALLDKGAAARNGQPARDEAQIADAFADTGAVFGGAAGGDRGGIGMRTLTAQPELDQSVALAMQLIQAPTYPDAVV GREKQRLISAIREADAKPGVIADKALAKAMYPGHPYGVSATQASVESISRDDIVKFWRDNYGASRAVVTLIGAIDRKQAE AIAEKLTGGLPPGSAAPAMPQVQMTIPASEQRVPHPAQQAAVVTGQPSMARGDPDYFALLVGNYVLGGGGFSSRLTDEVR EKRGLTYGVDSYFAPSKQAGPFGISLQTKKEQTNEALALVRQVLTRFVTEGPTDAELKAAKDNLVNGFPLRIDSNRKLLT NVANIGWYGLPLDYLDTWTAQVGKVTRQQVQAAFQRHVHPNAMATVIVGGPE
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI46593007, Length=408, Percent_Identity=22.3039215686275, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 47688; Mature: 47556
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSDITIPSPRALRRLAGAALGALALLATQCALAAIPIEHWTASTGAQVFYVHSPSIPM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCEE LDINVDFDAGSRYDPAGKAGLATLAAALLDKGAAARNGQPARDEAQIADAFADTGAVFGG EEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC AAGGDRGGIGMRTLTAQPELDQSVALAMQLIQAPTYPDAVVGREKQRLISAIREADAKPG CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCCCCCC VIADKALAKAMYPGHPYGVSATQASVESISRDDIVKFWRDNYGASRAVVTLIGAIDRKQA CHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EAIAEKLTGGLPPGSAAPAMPQVQMTIPASEQRVPHPAQQAAVVTGQPSMARGDPDYFAL HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCEEEECCCCCCCCCCCEEEE LVGNYVLGGGGFSSRLTDEVREKRGLTYGVDSYFAPSKQAGPFGISLQTKKEQTNEALAL EECCEEECCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH VRQVLTRFVTEGPTDAELKAAKDNLVNGFPLRIDSNRKLLTNVANIGWYGLPLDYLDTWT HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCEECCCHHHHHHHH AQVGKVTRQQVQAAFQRHVHPNAMATVIVGGPE HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC >Mature Secondary Structure SLSDITIPSPRALRRLAGAALGALALLATQCALAAIPIEHWTASTGAQVFYVHSPSIPM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCEE LDINVDFDAGSRYDPAGKAGLATLAAALLDKGAAARNGQPARDEAQIADAFADTGAVFGG EEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC AAGGDRGGIGMRTLTAQPELDQSVALAMQLIQAPTYPDAVVGREKQRLISAIREADAKPG CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCCCCCC VIADKALAKAMYPGHPYGVSATQASVESISRDDIVKFWRDNYGASRAVVTLIGAIDRKQA CHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EAIAEKLTGGLPPGSAAPAMPQVQMTIPASEQRVPHPAQQAAVVTGQPSMARGDPDYFAL HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCEEEECCCCCCCCCCCEEEE LVGNYVLGGGGFSSRLTDEVREKRGLTYGVDSYFAPSKQAGPFGISLQTKKEQTNEALAL EECCEEECCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH VRQVLTRFVTEGPTDAELKAAKDNLVNGFPLRIDSNRKLLTNVANIGWYGLPLDYLDTWT HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCEECCCHHHHHHHH AQVGKVTRQQVQAAFQRHVHPNAMATVIVGGPE HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]