Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is pqqL [C]
Identifier: 73540041
GI number: 73540041
Start: 364718
End: 366238
Strand: Direct
Name: pqqL [C]
Synonym: Reut_A0335
Alternate gene names: 73540041
Gene position: 364718-366238 (Clockwise)
Preceding gene: 73540039
Following gene: 73540042
Centisome position: 9.58
GC content: 64.3
Gene sequence:
>1521_bases ATGAACCATCGCACTGTCGTGACCGGAACGGGCGGTACCCGCCCTAAACCCATTCCCGCCCCTGCCGAATGCCGGGCGCG CCTGGAACGCCTGGCACGGCGGGCGCTGCCGGTCCTGCTGCTGGCGGCGCTGCCCTGGACTGCCGGCGCGCAAACGCCGC GCACTGTCGCTTCCCCCATGCCATCCGGGCAGACTGCTCCGGTAGACGCCACGGCACAGGGCACCACCGAGTACAAGCTG TCCAATGGACTACGCCTGATCGTCAAGGAAGACCACCGAGCGCCCACGGTGGCGCACCAGATCTGGTACCGCGTCGGCGG TATCGACGAAGTCAGTGGCACCACGGGCGTCGCCCATATGCTCGAACACATGATGTTCAAGGGCACGCCCAAGGTCGGCG TGGGCGAATTCTCCAAGCAGGTCGCCGCGCTGGGCGGCCGCGAAAACGCCATGACTAACCGCGACTTCACGCTGTATTAC CAGCAGATCGGCAAGCAATACCTGCCGAAGATGATGGAGCTCGAAGCCGACCGTATGGCCAACCTGATCTTCAACAAGGG CGAGTTCGACCGCGAGATGAAGGTGGTGATGGAAGAGCGGCGCCTGCGCACCGATGACTCTGCGCGTGGCACGGTCTACG AGCAGTTGCTGGCCAACGTCTATGTCGCTGCACCTTACCGGCATCCGGTAATCGGGTGGATGGACGACCTCGTCAACATG CGCCTGGAAGACGTCCAGTCCTGGTACCGGAGCTGGTACGTCCCGAACAACGCCACGGTAATCGTGACCGGCGACGTCAA TCCGGCCGAGGTCCGCGCTTTGGCCGAGCGCTACTACGGCAAGCTCAAGCCGCGCCCGCTGCCGCTGCGCAAGGAGCAGA TCGACCCGCCGCAACTGGGCATCAAGCGCGTCTGGGTCAAGGCGCCAGCCGAGAACCCGTACATGGTGATGGCCTACAAG GTGCCGCGCCTGCGCGACGTGGAGAAGGATGTCGATCCCTATGCGCTCGAAGTCCTGGCCGCGGTGCTCAACGGTTACGA CAACGCGCGCCTGACGCGTGAACTGGTGCGCGAACAGCGCCTGGCCGACGACGTCAATGTCGGCTACGACAGCATCAACC GCGGCAATTCGCTGTTTGTGCTCGATGGCACGCCGGCCGACGGCCATACCACCGAGCAGATCGAGGCCGCGCTGCGCGAG GAAATCCAGCGCATTGCCAGGAACGGTGTTTCGCCGGAAGAGCTCAAGCGCGTCAAGGCGCAGGTCGTGGCCAGCCAGAT CTACAAGCGCGATTCCGTGTTCGGCCAAGGCATGGAGATCGGCGTGGCAGAGATCTCCGATATCTCGTGGCGCAAGATCG ACCGCATCCTCGACAAGATCAAGGAAGTCACGCCGGCGCAGGTCCAGGCTGTGGCCGCGAAGTACTTCACCGACGACAAC CTGACCGTGGCCACGCTGTTGCCGCAGCCGATCGATCCCAACAAGCCCAAGGCCAAGGCCCCCGAAGGCCTGCGCCACTG A
Upstream 100 bases:
>100_bases CCTGTCGTTGTGGTGCGTAGCCGCTATTGCGTATAGTTCGTAACACAGCGGATTCATGGGCACATGAATCGATCGGCAAA ATTCTAACAGACGGGGTTGC
Downstream 100 bases:
>100_bases GGAGCCACGCATGTCCCTGTCCGACATTACGATTCCTTCACCGCGCGCGCTGCGCCGGCTGGCGGGCGCGGCCCTGGGAG CGCTGGCGCTGCTGGCCACG
Product: peptidase M16, C-terminal:peptidase M16, N-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MNHRTVVTGTGGTRPKPIPAPAECRARLERLARRALPVLLLAALPWTAGAQTPRTVASPMPSGQTAPVDATAQGTTEYKL SNGLRLIVKEDHRAPTVAHQIWYRVGGIDEVSGTTGVAHMLEHMMFKGTPKVGVGEFSKQVAALGGRENAMTNRDFTLYY QQIGKQYLPKMMELEADRMANLIFNKGEFDREMKVVMEERRLRTDDSARGTVYEQLLANVYVAAPYRHPVIGWMDDLVNM RLEDVQSWYRSWYVPNNATVIVTGDVNPAEVRALAERYYGKLKPRPLPLRKEQIDPPQLGIKRVWVKAPAENPYMVMAYK VPRLRDVEKDVDPYALEVLAAVLNGYDNARLTRELVREQRLADDVNVGYDSINRGNSLFVLDGTPADGHTTEQIEAALRE EIQRIARNGVSPEELKRVKAQVVASQIYKRDSVFGQGMEIGVAEISDISWRKIDRILDKIKEVTPAQVQAVAAKYFTDDN LTVATLLPQPIDPNKPKAKAPEGLRH
Sequences:
>Translated_506_residues MNHRTVVTGTGGTRPKPIPAPAECRARLERLARRALPVLLLAALPWTAGAQTPRTVASPMPSGQTAPVDATAQGTTEYKL SNGLRLIVKEDHRAPTVAHQIWYRVGGIDEVSGTTGVAHMLEHMMFKGTPKVGVGEFSKQVAALGGRENAMTNRDFTLYY QQIGKQYLPKMMELEADRMANLIFNKGEFDREMKVVMEERRLRTDDSARGTVYEQLLANVYVAAPYRHPVIGWMDDLVNM RLEDVQSWYRSWYVPNNATVIVTGDVNPAEVRALAERYYGKLKPRPLPLRKEQIDPPQLGIKRVWVKAPAENPYMVMAYK VPRLRDVEKDVDPYALEVLAAVLNGYDNARLTRELVREQRLADDVNVGYDSINRGNSLFVLDGTPADGHTTEQIEAALRE EIQRIARNGVSPEELKRVKAQVVASQIYKRDSVFGQGMEIGVAEISDISWRKIDRILDKIKEVTPAQVQAVAAKYFTDDN LTVATLLPQPIDPNKPKAKAPEGLRH >Mature_506_residues MNHRTVVTGTGGTRPKPIPAPAECRARLERLARRALPVLLLAALPWTAGAQTPRTVASPMPSGQTAPVDATAQGTTEYKL SNGLRLIVKEDHRAPTVAHQIWYRVGGIDEVSGTTGVAHMLEHMMFKGTPKVGVGEFSKQVAALGGRENAMTNRDFTLYY QQIGKQYLPKMMELEADRMANLIFNKGEFDREMKVVMEERRLRTDDSARGTVYEQLLANVYVAAPYRHPVIGWMDDLVNM RLEDVQSWYRSWYVPNNATVIVTGDVNPAEVRALAERYYGKLKPRPLPLRKEQIDPPQLGIKRVWVKAPAENPYMVMAYK VPRLRDVEKDVDPYALEVLAAVLNGYDNARLTRELVREQRLADDVNVGYDSINRGNSLFVLDGTPADGHTTEQIEAALRE EIQRIARNGVSPEELKRVKAQVVASQIYKRDSVFGQGMEIGVAEISDISWRKIDRILDKIKEVTPAQVQAVAAKYFTDDN LTVATLLPQPIDPNKPKAKAPEGLRH
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI46593007, Length=203, Percent_Identity=27.0935960591133, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI94538354, Length=201, Percent_Identity=26.865671641791, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1787770, Length=215, Percent_Identity=33.953488372093, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17553678, Length=436, Percent_Identity=22.7064220183486, Blast_Score=90, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71999683, Length=204, Percent_Identity=25.9803921568627, Blast_Score=83, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323192, Length=218, Percent_Identity=23.394495412844, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323421, Length=329, Percent_Identity=21.580547112462, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI21357875, Length=210, Percent_Identity=29.5238095238095, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24646943, Length=210, Percent_Identity=29.5238095238095, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 56669; Mature: 56669
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHRTVVTGTGGTRPKPIPAPAECRARLERLARRALPVLLLAALPWTAGAQTPRTVASPM CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC PSGQTAPVDATAQGTTEYKLSNGLRLIVKEDHRAPTVAHQIWYRVGGIDEVSGTTGVAHM CCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH LEHMMFKGTPKVGVGEFSKQVAALGGRENAMTNRDFTLYYQQIGKQYLPKMMELEADRMA HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLIFNKGEFDREMKVVMEERRLRTDDSARGTVYEQLLANVYVAAPYRHPVIGWMDDLVNM HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH RLEDVQSWYRSWYVPNNATVIVTGDVNPAEVRALAERYYGKLKPRPLPLRKEQIDPPQLG HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHC IKRVWVKAPAENPYMVMAYKVPRLRDVEKDVDPYALEVLAAVLNGYDNARLTRELVREQR CEEEEEECCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH LADDVNVGYDSINRGNSLFVLDGTPADGHTTEQIEAALREEIQRIARNGVSPEELKRVKA HHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QVVASQIYKRDSVFGQGMEIGVAEISDISWRKIDRILDKIKEVTPAQVQAVAAKYFTDDN HHHHHHHHHHHHHCCCCCEECHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC LTVATLLPQPIDPNKPKAKAPEGLRH CEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNHRTVVTGTGGTRPKPIPAPAECRARLERLARRALPVLLLAALPWTAGAQTPRTVASPM CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC PSGQTAPVDATAQGTTEYKLSNGLRLIVKEDHRAPTVAHQIWYRVGGIDEVSGTTGVAHM CCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH LEHMMFKGTPKVGVGEFSKQVAALGGRENAMTNRDFTLYYQQIGKQYLPKMMELEADRMA HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLIFNKGEFDREMKVVMEERRLRTDDSARGTVYEQLLANVYVAAPYRHPVIGWMDDLVNM HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHH RLEDVQSWYRSWYVPNNATVIVTGDVNPAEVRALAERYYGKLKPRPLPLRKEQIDPPQLG HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHC IKRVWVKAPAENPYMVMAYKVPRLRDVEKDVDPYALEVLAAVLNGYDNARLTRELVREQR CEEEEEECCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH LADDVNVGYDSINRGNSLFVLDGTPADGHTTEQIEAALREEIQRIARNGVSPEELKRVKA HHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QVVASQIYKRDSVFGQGMEIGVAEISDISWRKIDRILDKIKEVTPAQVQAVAAKYFTDDN HHHHHHHHHHHHHCCCCCEECHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC LTVATLLPQPIDPNKPKAKAPEGLRH CEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]