Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
---|---|
Accession | NC_007292 |
Length | 791,654 |
Click here to switch to the map view.
The map label for this gene is hisD
Identifier: 71892237
GI number: 71892237
Start: 570629
End: 571960
Strand: Direct
Name: hisD
Synonym: BPEN_478
Alternate gene names: 71892237
Gene position: 570629-571960 (Clockwise)
Preceding gene: 71892236
Following gene: 71892238
Centisome position: 72.08
GC content: 35.36
Gene sequence:
>1332_bases ATGATTTCTCATGAACATCCTATATCTATTTATTGGAATGATTGTTCCAAATCTGAACAAAAAAAACTGCTGACCCGTCC AATAAATAACAAATTAAACGATATTTATATAAATGTTAAAAATATACTTACAAAAGTTTATAACGAAGGCGATCGTGCTT TATTTAAATTTAATTTTGATTTTGACAACGTCCAAACTACACAATTGCAAATCCCAACTGAAATTATCATGAATTCGGGA CGTAACTTGTCTAATGAAATAAAACAAGCAATACATACCGCCATGACCAATATAACACGGTTTCATCAAGCACAATGTTA TTCAGAGATAATCGTGGAAACTCTTCCAGGCGTATATTGCCAACAAATTATTCGCCCATTAAATATTGTTGGACTATATG TACCAGGAGGAACTGCACCGCTGTTGTCAACAGTTATGATGTTAGGTGTCCCAGCTCGTATTGCAAAATGTAAACGTGTA ATATTATGTTCACCCCCACCAATTCCGGACGTAATTATATATACCGCACAACTTTGCGGTATCGACGAAATTTATCAAAT AGGAGGTAGTCAATCTATAGCCGCTATGGGATTTGGCACTGAGTCTATTCCGAAAGTAGATAAGATATTTGGACCAGGTA ATATATGGGTTACAGAAGCAAAACGACAAATTAATCTTGCTCCAAATGGAGCTGCTATTGATATGCTAGCTGGACCTTCC GAAATATTAATTATTGCAGATAATACGGCTAATCCTATTTTTATCGCAGCAGACCTTTTGTCACAATCAGAGCACGGACC TGATTCGCACGCAATACTTATAACGCCCTACTCGTGCATTGCAGAAAAAACAAAAAAAGAGCTACATAAACAATTAAAAA TATTACCACGAAATGATATCGTTCGTAACGTATTATTGAATAGTCGCATGATTATTACTAATAATTTAATGGAATGTTTT TCTATAAGCAATAGCTATGCTCCAGAGCATTTGATTATTCAAATTGAAAATGCATCAGATTATTTACATTACATCACGAA TGCCGGATCAATATTCCTTGGAAATTGGTCTCCGGAAACTGCTGGAGATTATGCAAGCGGGCCTAATCACGTTTTACCTA CATACGGGCGCGCAGTTGCCACATCTGGTCTAGGAGTTATAGATTTTCAAAAAAGAATGTCGGTACAACAATTAACCCAA AATGGATTATTGCAGCTATCATCAACCATTACAACATTAACACAAATCGAACAATTAAAAGCTCATGAATATGCCATAAC ACATCGTATAAACTATATCAAGGAACAAAATGAACATTCGTTACTTGGCTAG
Upstream 100 bases:
>100_bases AGTAATGAAACATTATTTTGGGAAACAATGGAAAATTTAAAAAATCTTGGAGCTAGTTCTATTTTAGTATTACCAATAGA AAAAATGATGGAATAATATT
Downstream 100 bases:
>100_bases GAATAATATATTAACTCTTAAACCTTATCAATCTGCTAGAAAATGCACACATTCAGGTAACATATGGCTGAACGCTAATG AATTTCCAATCGCTCCCGAC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MISHEHPISIYWNDCSKSEQKKLLTRPINNKLNDIYINVKNILTKVYNEGDRALFKFNFDFDNVQTTQLQIPTEIIMNSG RNLSNEIKQAIHTAMTNITRFHQAQCYSEIIVETLPGVYCQQIIRPLNIVGLYVPGGTAPLLSTVMMLGVPARIAKCKRV ILCSPPPIPDVIIYTAQLCGIDEIYQIGGSQSIAAMGFGTESIPKVDKIFGPGNIWVTEAKRQINLAPNGAAIDMLAGPS EILIIADNTANPIFIAADLLSQSEHGPDSHAILITPYSCIAEKTKKELHKQLKILPRNDIVRNVLLNSRMIITNNLMECF SISNSYAPEHLIIQIENASDYLHYITNAGSIFLGNWSPETAGDYASGPNHVLPTYGRAVATSGLGVIDFQKRMSVQQLTQ NGLLQLSSTITTLTQIEQLKAHEYAITHRINYIKEQNEHSLLG
Sequences:
>Translated_443_residues MISHEHPISIYWNDCSKSEQKKLLTRPINNKLNDIYINVKNILTKVYNEGDRALFKFNFDFDNVQTTQLQIPTEIIMNSG RNLSNEIKQAIHTAMTNITRFHQAQCYSEIIVETLPGVYCQQIIRPLNIVGLYVPGGTAPLLSTVMMLGVPARIAKCKRV ILCSPPPIPDVIIYTAQLCGIDEIYQIGGSQSIAAMGFGTESIPKVDKIFGPGNIWVTEAKRQINLAPNGAAIDMLAGPS EILIIADNTANPIFIAADLLSQSEHGPDSHAILITPYSCIAEKTKKELHKQLKILPRNDIVRNVLLNSRMIITNNLMECF SISNSYAPEHLIIQIENASDYLHYITNAGSIFLGNWSPETAGDYASGPNHVLPTYGRAVATSGLGVIDFQKRMSVQQLTQ NGLLQLSSTITTLTQIEQLKAHEYAITHRINYIKEQNEHSLLG >Mature_443_residues MISHEHPISIYWNDCSKSEQKKLLTRPINNKLNDIYINVKNILTKVYNEGDRALFKFNFDFDNVQTTQLQIPTEIIMNSG RNLSNEIKQAIHTAMTNITRFHQAQCYSEIIVETLPGVYCQQIIRPLNIVGLYVPGGTAPLLSTVMMLGVPARIAKCKRV ILCSPPPIPDVIIYTAQLCGIDEIYQIGGSQSIAAMGFGTESIPKVDKIFGPGNIWVTEAKRQINLAPNGAAIDMLAGPS EILIIADNTANPIFIAADLLSQSEHGPDSHAILITPYSCIAEKTKKELHKQLKILPRNDIVRNVLLNSRMIITNNLMECF SISNSYAPEHLIIQIENASDYLHYITNAGSIFLGNWSPETAGDYASGPNHVLPTYGRAVATSGLGVIDFQKRMSVQQLTQ NGLLQLSSTITTLTQIEQLKAHEYAITHRINYIKEQNEHSLLG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=427, Percent_Identity=54.3325526932084, Blast_Score=506, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6319819, Length=424, Percent_Identity=42.4528301886792, Blast_Score=335, Evalue=1e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_BLOPB (Q492K3)
Other databases:
- EMBL: CP000016 - RefSeq: YP_277970.1 - ProteinModelPortal: Q492K3 - SMR: Q492K3 - STRING: Q492K3 - GeneID: 3562985 - GenomeReviews: CP000016_GR - KEGG: bpn:BPEN_478 - eggNOG: COG0141 - HOGENOM: HBG329596 - OMA: LDAHKNA - ProtClustDB: PRK00877 - BioCyc: CBLO291272:BPEN_478-MONOMER - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 49150; Mature: 49150
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 329-329 ACT_SITE 330-330 BINDING 133-133 BINDING 191-191 BINDING 214-214 BINDING 240-240 BINDING 262-262 BINDING 265-265 BINDING 330-330 BINDING 363-363 BINDING 417-417 BINDING 422-422
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISHEHPISIYWNDCSKSEQKKLLTRPINNKLNDIYINVKNILTKVYNEGDRALFKFNFD CCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCEEEEEEECC FDNVQTTQLQIPTEIIMNSGRNLSNEIKQAIHTAMTNITRFHQAQCYSEIIVETLPGVYC CCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QQIIRPLNIVGLYVPGGTAPLLSTVMMLGVPARIAKCKRVILCSPPPIPDVIIYTAQLCG HHHHCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHCCEEEEECCCCCCHHHHHHHHHCC IDEIYQIGGSQSIAAMGFGTESIPKVDKIFGPGNIWVTEAKRQINLAPNGAAIDMLAGPS HHHHHHCCCCCCEEEECCCCCCCCCHHHHCCCCCEEEEECCEEEEECCCCCEEEEECCCC EILIIADNTANPIFIAADLLSQSEHGPDSHAILITPYSCIAEKTKKELHKQLKILPRNDI EEEEEECCCCCCEEEEEEHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHH VRNVLLNSRMIITNNLMECFSISNSYAPEHLIIQIENASDYLHYITNAGSIFLGNWSPET HHHHHHCCCEEEHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHCCCEEEEECCCCCC AGDYASGPNHVLPTYGRAVATSGLGVIDFQKRMSVQQLTQNGLLQLSSTITTLTQIEQLK CCCCCCCCCCCCCCCCCHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AHEYAITHRINYIKEQNEHSLLG HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MISHEHPISIYWNDCSKSEQKKLLTRPINNKLNDIYINVKNILTKVYNEGDRALFKFNFD CCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCEEEEEEECC FDNVQTTQLQIPTEIIMNSGRNLSNEIKQAIHTAMTNITRFHQAQCYSEIIVETLPGVYC CCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QQIIRPLNIVGLYVPGGTAPLLSTVMMLGVPARIAKCKRVILCSPPPIPDVIIYTAQLCG HHHHCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHCCEEEEECCCCCCHHHHHHHHHCC IDEIYQIGGSQSIAAMGFGTESIPKVDKIFGPGNIWVTEAKRQINLAPNGAAIDMLAGPS HHHHHHCCCCCCEEEECCCCCCCCCHHHHCCCCCEEEEECCEEEEECCCCCEEEEECCCC EILIIADNTANPIFIAADLLSQSEHGPDSHAILITPYSCIAEKTKKELHKQLKILPRNDI EEEEEECCCCCCEEEEEEHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHH VRNVLLNSRMIITNNLMECFSISNSYAPEHLIIQIENASDYLHYITNAGSIFLGNWSPET HHHHHHCCCEEEHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHCCCEEEEECCCCCC AGDYASGPNHVLPTYGRAVATSGLGVIDFQKRMSVQQLTQNGLLQLSSTITTLTQIEQLK CCCCCCCCCCCCCCCCCHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AHEYAITHRINYIKEQNEHSLLG HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA