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The map label for this gene is cc4 [H]

Identifier: 66767102

GI number: 66767102

Start: 921859

End: 922599

Strand: Reverse

Name: cc4 [H]

Synonym: XC_0766

Alternate gene names: 66767102

Gene position: 922599-921859 (Counterclockwise)

Preceding gene: 66767105

Following gene: 66767101

Centisome position: 17.92

GC content: 71.52

Gene sequence:

>741_bases
GTGGCGTTTGCCCAGTCGGCGGTCACGCCGATCCCCGATCCGCCGCCCATCCGCGTTGCGCCGCTGGAGGTCGACCTGTC
CAAGACCACCTGGGGCGATGCCAAGGCCGGCCAGGCCAAGGCCGCTGCCTGCGCGGCCTGTCACGGGCCGGACGGCAACC
CGGCGGTGCCGATGTATCCGCGCATCGCCGGCCAGACCGAGCGCTACGTGGCGCACCAGGTGGCGCTGATCGCCAGCGGT
GAGCGCAATACCGGCATGTCGGCGGTGATGGTGCCCTTCGTCAAGGACCTCACCGCGCAGGACATGCGCGATCTGGGCGC
CTACTTCGCCACGCAGAAATCCGCCGCCGGCGTCGCCGACGATGCGGTGATCAGCGAGGGCCCCTACCAGGGCATGAAGT
TCTACGAGGCCGGCGAGAAGCTCTACCGCGGCGGCGACATCGCCCGCGGCGTGCCGGCCTGCATGGCCTGCCATGGGCCC
TCCGGCAGCGGCAACCCGGGGCCGGCCTACCCGCGCCTGGGCGGCCAGCACGCCGAGTACGTGGCGCGCCGCCTCAAGGA
ATACCAGGCCGGCACGACCCAGGAGCGCAATCCGGCGCTGTTCAATATCATGGCGCAGGTGGCCAAGCCGCTGAGCGAGC
AGGAGATCCAGGCGCTGGCCAGCTATCTGCAAGGCCTGCACGACCGCGCCGACGATGCCGCGGCCGCGCAACTGCCCGCC
GGGACGCCCGCACGCTCATGA

Upstream 100 bases:

>100_bases
CAACTTCACGCGCGCGGGCCGGGTCCATACGGAGCTTTAGCTGATGCGCCATGCTCGTGTGCTTGTCCTTGCCGCCATTG
CCGTGCCGGTCGTTGCCGCG

Downstream 100 bases:

>100_bases
GGTGAGTGCCGCGGCGGTCCACCCGCTTCGCAACGCCGGTCTTCGGGCCGGCGTTGTCGTTTCACCGCGTCGTATCACCG
CAATCCATCCCCCTCGGAGC

Product: cytochrome C4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAFAQSAVTPIPDPPPIRVAPLEVDLSKTTWGDAKAGQAKAAACAACHGPDGNPAVPMYPRIAGQTERYVAHQVALIASG
ERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKSAAGVADDAVISEGPYQGMKFYEAGEKLYRGGDIARGVPACMACHGP
SGSGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAKPLSEQEIQALASYLQGLHDRADDAAAAQLPA
GTPARS

Sequences:

>Translated_246_residues
MAFAQSAVTPIPDPPPIRVAPLEVDLSKTTWGDAKAGQAKAAACAACHGPDGNPAVPMYPRIAGQTERYVAHQVALIASG
ERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKSAAGVADDAVISEGPYQGMKFYEAGEKLYRGGDIARGVPACMACHGP
SGSGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAKPLSEQEIQALASYLQGLHDRADDAAAAQLPA
GTPARS
>Mature_245_residues
AFAQSAVTPIPDPPPIRVAPLEVDLSKTTWGDAKAGQAKAAACAACHGPDGNPAVPMYPRIAGQTERYVAHQVALIASGE
RNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKSAAGVADDAVISEGPYQGMKFYEAGEKLYRGGDIARGVPACMACHGPS
GSGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAKPLSEQEIQALASYLQGLHDRADDAAAAQLPAG
TPARS

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 25766; Mature: 25635

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFAQSAVTPIPDPPPIRVAPLEVDLSKTTWGDAKAGQAKAAACAACHGPDGNPAVPMYP
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
RIAGQTERYVAHQVALIASGERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKSAAGVAD
CCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DAVISEGPYQGMKFYEAGEKLYRGGDIARGVPACMACHGPSGSGNPGPAYPRLGGQHAEY
CHHHCCCCCCCHHHHHHHHHHHCCCCHHCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHH
VARRLKEYQAGTTQERNPALFNIMAQVAKPLSEQEIQALASYLQGLHDRADDAAAAQLPA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC
GTPARS
CCCCCC
>Mature Secondary Structure 
AFAQSAVTPIPDPPPIRVAPLEVDLSKTTWGDAKAGQAKAAACAACHGPDGNPAVPMYP
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
RIAGQTERYVAHQVALIASGERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKSAAGVAD
CCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DAVISEGPYQGMKFYEAGEKLYRGGDIARGVPACMACHGPSGSGNPGPAYPRLGGQHAEY
CHHHCCCCCCCHHHHHHHHHHHCCCCHHCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHH
VARRLKEYQAGTTQERNPALFNIMAQVAKPLSEQEIQALASYLQGLHDRADDAAAAQLPA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC
GTPARS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]