| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is dsbA [H]
Identifier: 66767101
GI number: 66767101
Start: 921104
End: 921754
Strand: Reverse
Name: dsbA [H]
Synonym: XC_0765
Alternate gene names: 66767101
Gene position: 921754-921104 (Counterclockwise)
Preceding gene: 66767102
Following gene: 66767100
Centisome position: 17.9
GC content: 67.43
Gene sequence:
>651_bases ATGAACCTGTTTTCCCGTCTGTCGCTGCTGTTGTTGATCCTGCTGCCGCTGGCCGCCTGTGCCGCGGACAAGAAGGCCCC GCCGGTGGAAGGCGAGGACTATGTGCTGATCGACGGCGGCCAGCCGTATGCGCCCCTGGCGGGCAAGGTCGAAGTGGCGG AAGTGTTCGGCTACACCTGCCCGCACTGCGCCCACTTCGAGCCGACGCTGGAAGCGTGGACCGCCAAGCAGCCGGCCTAT GTGCGGGTCACGCCGGTACCGGCGGCCTTTGGCGGCTTCTGGGATGCGTTCGCGCGTGCCTACTTCGCCGCCGACACGCT GGGCGTGGCCAAGCGCAGCCACCGCGCCATGTTCGACGCCATCCACGAAAAGCACACCGTGCCCACCCAGAACGTGGCCC CGGAAGAGCTGGCGGCCTTCTACGTCGCCTACGGCGTGCCGCAGCAACGTTTCATCGACACGCTCAAGAGCGCGGCGGTG GAAGACAAGGTCAAGGCCGCGCGCGAATTTGCAACGCGCGCCAAGATCCCCGGCACGCCGGCCCTGGTGGTCAACGGGCG CTATCTGATCACCGCGCGTGACTACACCGACATGCTGCGCGTAGCCGATTATCTGATTGCCCGCGAGCACGCCGCGCCGG CCGCGCGCTGA
Upstream 100 bases:
>100_bases AGTGCCGCGGCGGTCCACCCGCTTCGCAACGCCGGTCTTCGGGCCGGCGTTGTCGTTTCACCGCGTCGTATCACCGCAAT CCATCCCCCTCGGAGCCCGC
Downstream 100 bases:
>100_bases GCCGCATAACCGCCATCACGCACGGCCCGTGGCATCATGCGCCCCGCGGCCGCTGCGGCCTCCCCTTCCGCCCCACGCTG GAGATCCAATCCGATGAAGA
Product: disulfide oxidoreductase
Products: 3-oxo-D 4-steroid; protein with oxidized disulfide bonds [C]
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MNLFSRLSLLLLILLPLAACAADKKAPPVEGEDYVLIDGGQPYAPLAGKVEVAEVFGYTCPHCAHFEPTLEAWTAKQPAY VRVTPVPAAFGGFWDAFARAYFAADTLGVAKRSHRAMFDAIHEKHTVPTQNVAPEELAAFYVAYGVPQQRFIDTLKSAAV EDKVKAAREFATRAKIPGTPALVVNGRYLITARDYTDMLRVADYLIAREHAAPAAR
Sequences:
>Translated_216_residues MNLFSRLSLLLLILLPLAACAADKKAPPVEGEDYVLIDGGQPYAPLAGKVEVAEVFGYTCPHCAHFEPTLEAWTAKQPAY VRVTPVPAAFGGFWDAFARAYFAADTLGVAKRSHRAMFDAIHEKHTVPTQNVAPEELAAFYVAYGVPQQRFIDTLKSAAV EDKVKAAREFATRAKIPGTPALVVNGRYLITARDYTDMLRVADYLIAREHAAPAAR >Mature_216_residues MNLFSRLSLLLLILLPLAACAADKKAPPVEGEDYVLIDGGQPYAPLAGKVEVAEVFGYTCPHCAHFEPTLEAWTAKQPAY VRVTPVPAAFGGFWDAFARAYFAADTLGVAKRSHRAMFDAIHEKHTVPTQNVAPEELAAFYVAYGVPQQRFIDTLKSAAV EDKVKAAREFATRAKIPGTPALVVNGRYLITARDYTDMLRVADYLIAREHAAPAAR
Specific function: Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1348 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023205 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 23590; Mature: 23590
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFSRLSLLLLILLPLAACAADKKAPPVEGEDYVLIDGGQPYAPLAGKVEVAEVFGYTC CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCC PHCAHFEPTLEAWTAKQPAYVRVTPVPAAFGGFWDAFARAYFAADTLGVAKRSHRAMFDA CCCCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHEKHTVPTQNVAPEELAAFYVAYGVPQQRFIDTLKSAAVEDKVKAAREFATRAKIPGTP HHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ALVVNGRYLITARDYTDMLRVADYLIAREHAAPAAR EEEECCEEEEEECCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNLFSRLSLLLLILLPLAACAADKKAPPVEGEDYVLIDGGQPYAPLAGKVEVAEVFGYTC CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCC PHCAHFEPTLEAWTAKQPAYVRVTPVPAAFGGFWDAFARAYFAADTLGVAKRSHRAMFDA CCCCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHEKHTVPTQNVAPEELAAFYVAYGVPQQRFIDTLKSAAVEDKVKAAREFATRAKIPGTP HHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ALVVNGRYLITARDYTDMLRVADYLIAREHAAPAAR EEEECCEEEEEECCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-oxo-D 5-steroid; protein with reduced SH groups [C]
Specific reaction: 3-oxo-D 5-steroid = 3-oxo-D 4-steroid protein with reduced SH groups = protein with oxidized disulfide bonds [C]
General reaction: Isomerases; Intramolecular Oxidoreductases; Transposing S-S Bonds [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10051655 [H]