| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is engXCA
Identifier: 66766977
GI number: 66766977
Start: 766737
End: 768191
Strand: Reverse
Name: engXCA
Synonym: XC_0639
Alternate gene names: 66766977
Gene position: 768191-766737 (Counterclockwise)
Preceding gene: 66766980
Following gene: 66766976
Centisome position: 14.92
GC content: 65.7
Gene sequence:
>1455_bases ATGTCCATATTCAGGACCGCAAGCACGCTCGCTTTGGCCACCGCCCTCGCACTGGCCGCCGGGCCGGCCTTCAGCTATTC CATCAACAACAGCAGGCAGATCGTCGACGACAGCGGCAAGGTCGTGCAGCTCAAGGGTGTGAACGTGTTCGGCTTCGAAA CCGGCAACCACGTGATGCATGGCCTGTGGGCACGCAACTGGAAGGACATGATCGTGCAGATGCAGGGCCTGGGCTTCAAC GCCGTGCGCCTGCCGTTCTGCCCGGCCACGCTGCGTAGCGACACCATGCCGGCCAGCATCGACTACAGCCGCAACGCCGA CCTGCAGGGCCTGACCTCGCTGCAGATCCTCGACAAGGTGATCGCCGAATTCAATGCGCGCGGCATGTATGTGCTGCTGG ATCACCACACCCCCGATTGCGCCGGCATTTCCGAGCTCTGGTACACCGGCTCCTATACCGAGGCACAGTGGCTGGCCGAC CTGCGCTTTGTGGCCAACCGCTACAAGAACGTGCCGTATGTACTCGGCCTGGATCTGAAGAACGAACCGCACGGCGCCGC CACCTGGGGTACCGGCAACGCCGCCACCGATTGGAACAAGGCTGCCGAGCGCGGCTCGGCCGCGGTGTTGGCGGTCGCGC CGAAGTGGCTGATCGCGGTGGAAGGCATCACCGACAACCCGGTGTGCTCCACCAACGGCGGCATCTTCTGGGGCGGCAAC CTGCAGCCGCTGGCCTGCACCCCGCTCAACATCCCGGCCAACCGCCTGCTGCTGGCCCCGCACGTGTACGGCCCGGACGT GTTCGTGCAGTCGTACTTCAACGACAGCAACTTCCCCAACAACATGCCCGCCATCTGGGAACGCCATTTCGGTCAGTTCG CCGGCACGCATGCGCTGTTGCTGGGCGAGTTCGGTGGCAAGTACGGCGAAGGCGACGCACGCGACAAGACCTGGCAGGAC GCGCTGGTGAAGTACCTGCGCAGCAAGGGCATCAACCAGGGCTTCTACTGGTCGTGGAATCCCAACAGCGGCGACACCGG CGGCATCCTGCGCGATGACTGGACCAGCGTGCGCCAGGACAAGATGACCCTGCTGCGCACGCTGTGGGGCACCGCCGGCA ATACCACGCCGACGCCGACTCCCACACCTACGCCCACACCGACACCGACGCCTACCCCCACGCCGACGCCCACCCCGGGC ACCAGCACCTTCAGCACCAAGGTGATCGTGGACAACAGCTGGAACGGCGGCTATTGCAACCGCGTGCAGGTGACCAACAC CGGCACCGCCAGCGGCACCTGGTCGATCGCGGTGCCGGTCACCGGTACGGTCAACAACGCCTGGAATGCGACCTGGTCGC AGAGCGGCAGCACGCTCAGAGCCAGCGGCGTGGACTTCAACCGCACCCTGGCAGCCGGCGCCACCGCCGAGTTCGGCTTC TGCGCCGCGAGCTGA
Upstream 100 bases:
>100_bases GTTTTCTGTGGGGACGATCACACCACGCGACGCGCGCACAGACCAAGATGCCCGCCTTACCGCGCTCGGGTGTCGAGCCC GGTTCTCTAGGGAGATCACC
Downstream 100 bases:
>100_bases GTGCACTGTGGCGGGTACGGCTCCCGTGTCCGCTACCTTTGCAACATGCAGTGGCATTGTGGAGGCGCTGCGTAGCAGGT TGATGATCACCTGCGGCGCC
Product: cellulase
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSIFRTASTLALATALALAAGPAFSYSINNSRQIVDDSGKVVQLKGVNVFGFETGNHVMHGLWARNWKDMIVQMQGLGFN AVRLPFCPATLRSDTMPASIDYSRNADLQGLTSLQILDKVIAEFNARGMYVLLDHHTPDCAGISELWYTGSYTEAQWLAD LRFVANRYKNVPYVLGLDLKNEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWLIAVEGITDNPVCSTNGGIFWGGN LQPLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWERHFGQFAGTHALLLGEFGGKYGEGDARDKTWQD ALVKYLRSKGINQGFYWSWNPNSGDTGGILRDDWTSVRQDKMTLLRTLWGTAGNTTPTPTPTPTPTPTPTPTPTPTPTPG TSTFSTKVIVDNSWNGGYCNRVQVTNTGTASGTWSIAVPVTGTVNNAWNATWSQSGSTLRASGVDFNRTLAAGATAEFGF CAAS
Sequences:
>Translated_484_residues MSIFRTASTLALATALALAAGPAFSYSINNSRQIVDDSGKVVQLKGVNVFGFETGNHVMHGLWARNWKDMIVQMQGLGFN AVRLPFCPATLRSDTMPASIDYSRNADLQGLTSLQILDKVIAEFNARGMYVLLDHHTPDCAGISELWYTGSYTEAQWLAD LRFVANRYKNVPYVLGLDLKNEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWLIAVEGITDNPVCSTNGGIFWGGN LQPLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWERHFGQFAGTHALLLGEFGGKYGEGDARDKTWQD ALVKYLRSKGINQGFYWSWNPNSGDTGGILRDDWTSVRQDKMTLLRTLWGTAGNTTPTPTPTPTPTPTPTPTPTPTPTPG TSTFSTKVIVDNSWNGGYCNRVQVTNTGTASGTWSIAVPVTGTVNNAWNATWSQSGSTLRASGVDFNRTLAAGATAEFGF CAAS >Mature_483_residues SIFRTASTLALATALALAAGPAFSYSINNSRQIVDDSGKVVQLKGVNVFGFETGNHVMHGLWARNWKDMIVQMQGLGFNA VRLPFCPATLRSDTMPASIDYSRNADLQGLTSLQILDKVIAEFNARGMYVLLDHHTPDCAGISELWYTGSYTEAQWLADL RFVANRYKNVPYVLGLDLKNEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWLIAVEGITDNPVCSTNGGIFWGGNL QPLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWERHFGQFAGTHALLLGEFGGKYGEGDARDKTWQDA LVKYLRSKGINQGFYWSWNPNSGDTGGILRDDWTSVRQDKMTLLRTLWGTAGNTTPTPTPTPTPTPTPTPTPTPTPTPGT STFSTKVIVDNSWNGGYCNRVQVTNTGTASGTWSIAVPVTGTVNNAWNATWSQSGSTLRASGVDFNRTLAAGATAEFGFC AAS
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CBM2 (carbohydrate binding type-2) domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GUNA_XANCP (P19487)
Other databases:
- EMBL: M32700 - EMBL: AE008922 - PIR: JH0158 - RefSeq: NP_638867.1 - ProteinModelPortal: P19487 - GeneID: 1000085 - GenomeReviews: AE008922_GR - KEGG: xcc:XCC3521 - HOGENOM: HBG754175 - OMA: WFGMETS - ProtClustDB: CLSK636809 - BioCyc: XCAM190485:XCC3521-MONOMER - BRENDA: 3.2.1.4 - InterPro: IPR008965 - InterPro: IPR012291 - InterPro: IPR001919 - InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 - Gene3D: G3DSA:2.60.40.290 - Gene3D: G3DSA:3.20.20.80 - SMART: SM00637
Pfam domain/function: PF00553 CBM_2; PF00150 Cellulase; SSF49384 Cellul_bind; SSF51445 Glyco_hydro_cat
EC number: =3.2.1.4
Molecular weight: Translated: 52242; Mature: 52111
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS51173 CBM2; PS00659 GLYCOSYL_HYDROL_F5
Important sites: ACT_SITE 182-182 ACT_SITE 303-303
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFRTASTLALATALALAAGPAFSYSINNSRQIVDDSGKVVQLKGVNVFGFETGNHVMH CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCEEEEECCEEEEEECCCHHHH GLWARNWKDMIVQMQGLGFNAVRLPFCPATLRSDTMPASIDYSRNADLQGLTSLQILDKV HHHHCCHHHHHEEECCCCCCEEECCCCCHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHH IAEFNARGMYVLLDHHTPDCAGISELWYTGSYTEAQWLADLRFVANRYKNVPYVLGLDLK HHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC NEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWLIAVEGITDNPVCSTNGGIFWGGN CCCCCCEECCCCCCCCCHHHHHHCCCEEEEEECCCEEEEEECCCCCCEECCCCCEEECCC LQPLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWERHFGQFAGTHALL CCCEEECCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEE LGEFGGKYGEGDARDKTWQDALVKYLRSKGINQGFYWSWNPNSGDTGGILRDDWTSVRQD EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCHHHHHHH KMTLLRTLWGTAGNTTPTPTPTPTPTPTPTPTPTPTPTPGTSTFSTKVIVDNSWNGGYCN HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC RVQVTNTGTASGTWSIAVPVTGTVNNAWNATWSQSGSTLRASGVDFNRTLAAGATAEFGF EEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCE CAAS EECC >Mature Secondary Structure SIFRTASTLALATALALAAGPAFSYSINNSRQIVDDSGKVVQLKGVNVFGFETGNHVMH CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCEEEEECCEEEEEECCCHHHH GLWARNWKDMIVQMQGLGFNAVRLPFCPATLRSDTMPASIDYSRNADLQGLTSLQILDKV HHHHCCHHHHHEEECCCCCCEEECCCCCHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHH IAEFNARGMYVLLDHHTPDCAGISELWYTGSYTEAQWLADLRFVANRYKNVPYVLGLDLK HHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC NEPHGAATWGTGNAATDWNKAAERGSAAVLAVAPKWLIAVEGITDNPVCSTNGGIFWGGN CCCCCCEECCCCCCCCCHHHHHHCCCEEEEEECCCEEEEEECCCCCCEECCCCCEEECCC LQPLACTPLNIPANRLLLAPHVYGPDVFVQSYFNDSNFPNNMPAIWERHFGQFAGTHALL CCCEEECCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEE LGEFGGKYGEGDARDKTWQDALVKYLRSKGINQGFYWSWNPNSGDTGGILRDDWTSVRQD EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCHHHHHHH KMTLLRTLWGTAGNTTPTPTPTPTPTPTPTPTPTPTPTPGTSTFSTKVIVDNSWNGGYCN HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC RVQVTNTGTASGTWSIAVPVTGTVNNAWNATWSQSGSTLRASGVDFNRTLAAGATAEFGF EEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCE CAAS EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2373365; 12024217