| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is fpvA [H]
Identifier: 66766980
GI number: 66766980
Start: 771147
End: 773411
Strand: Reverse
Name: fpvA [H]
Synonym: XC_0642
Alternate gene names: 66766980
Gene position: 773411-771147 (Counterclockwise)
Preceding gene: 66766988
Following gene: 66766977
Centisome position: 15.02
GC content: 65.87
Gene sequence:
>2265_bases TTGCGCGTGCCCTCCCCTTCGTTGCCGAGTGTGTCCATGCCCGTTGCCCTGCTACGCTCCGTGCGCGCCCACTCCCGCCT GTTGCTGGCGCTGCAGTGCGCCGGTGCGTTGTGTGCCACCGCCGCGCATGCACAGGACAATGCCCCCGCGCCGACAGCAA ACACGCTGGACCAGGTGCTGGTGACCGGCCGCACCGAGGGCTACCAGGTGCGCGGCACCAATACCGCCACCAAGTTGCCG CTGACGCTGCGCGAGACGCCGCAATCGCTAACGGTATTCACCCGCCAGCGCATCGAAGACTTCAACCTCATCACCATCGC CGAGGTGTTGCAGCAGACGCCAGGCGTCACCGTGCAGTCCTACGACAGCAACCGCACGCTGTTCGCTGCGCGCGGATTTG CGATCAGCAACTTCATGTTCGATGGCGTGCCGACCAACTACACCACCGGCGCGGGCGGCAATTCGATCCTCAGCGACACC TCGATCTACGAGCGTATCGAAGTGGTGCGCGGCGCCAGTGGCCTGGTGACCGGCTCGGGTAATCCATCGGCCACCGTCAA CATGGTGCGCAAGCGCCCCACCACGGCGTTCCAGGCCAGTACCAGCCTCAATGTTGGCTCATGGGATTACCGCCGCGCCG AGCTGGACGTTGCCGGCCCGCTGACCTCCGGCGGGCGCATGCGCGGCCGCGTGGTGGGCGCCTACACCGAAAAGGACAGC TGGGTGCGCTTCCAGCAGGACCGCTCGCCCAGCATGTACGGCGTGCTCGAAGCCGACCTCACCGACAGCACGCGGCTGCG CGCGGGCATCGACCACCTCGCCACGCACTCCGATGGCGGTGCGTGGAGTGCCGCGCCGCTGTTCTTCAGCGATGGCACAC CGGCACGGCTGCCGCGCTCCTACAGCGCCGCAGCACGCTGGAACCGGTGGGAGCGCGAAAGCACCAATGTCTTCGCAACG CTGGAACAGCAATTTGCCGGCGGCTGGAGCGGGCGGCTTGCCTACAACCATCGCGCCACCGATACCGACAGCCTGCTGTT TGCCGGCTCCAACAGCGCCTCGTTCGCCGATGCGCGCACCGGGTTGGGATTGCGCGTGTCCGACACCTACGGCGTGTCGG AAACCCGCGAGAACGCGCTGGATCTCTACGCCTCCGGCCCGTTCCAATGGTTGGGCCGTGCGCACGAACTGGTGGTCGGC GCCAATCACTACGACCGCGATCTCGGCACGCTGCGCACCGCCATCACCGCGCGTCCCTACAGCCTGACCGCCTTCCCCAG CATCTTCGACTGGAATGGCGATGTGGGCCGGCCGACCACCACCAATGCCGGCATCCCCAGCAGCATCACCAACACGCAGG AAACAGGCTATTACGCGGCCGTGCGGCTCAATCCCACCGATGCGTTGAAGCTGATCGGCGGTGGGCGGTATTCCAGCTGG AACACCGCCACGGACAACTATTCGCCGGCCAACCAGTTCACCGGACGCAGCGCCGACTACGACGCCGATGCGCTCACCCC GTATCTGGGCGCGATCTACGACCTGAGCCGGCACCTCTCGGCGTTTGTGTCGTATTCGGATGTATTCCAGGCACAGAACC TGCGCGACCGCACCAACCAGCAACTGGATCCGGTGGTGGGTGCCAATCTCGAGTACGGCTTCAAGGGCGAGTTCTTTGGC GGTGCGCTCTACGCCGCGCTCAACGGCTTCCACATGCAACAGGACAACGTGGCCGAAATCGATCCGGAAGTGGCGCCCAA CAGCCTGCCCGATGGCAGCTCTGCGTATCGCGCGGTGTCGGGCGTGGAAACCTGGGGCGGCGAGTTCGAAGTCTCCGGCG CGATCACCCCGGACTGGAGCATGACCGGCGGCTACACCTACGCCTACAGCACCGACCAGCGCGGCGCGCGGGTGTTCACC ACCAGCCCGATGCACCTGGCGCGCTTCAACACCACCTACCGGTTCGGCGACTGGACCCTGGGCGGCGGGATCAGCTGGCA GAGCGCGGTGTATCAGAATCAGACCATCCCCACCGGGCGCTTCACCGCGGCCGGCGCACCGATCACGCGCAGCGGGCGGG TCACCCAGGGCGGCTATCTACTGGTGGATCTGATGGGCCGCTACCGCATCAACGAGCAGCTGAGCGTGGGCGTGACGGTG ACCAACCTGTTCGACAAGGTTTATTACCGCAACGTGGGCTTCTTCAATTCCGGCTACTGGGGCGAACCGCGGCGGCTATT GTTCAACCTGCGCGCGAACTTCTAA
Upstream 100 bases:
>100_bases GTACGTACTCGACGCCCGCGCGCAACTTTAATAATATTCATTCTCACTTACGCGCTGCGCAACGTGCCTGACCCAGTGGC GGCAACGCCGTGCCTGCCGC
Downstream 100 bases:
>100_bases GCGTACGAGGCGCCTTGACGGTGGCGCCATGCAAACTCAGAACAGATCCACGCTGCCGGTCTGCTGGTCCACCCGCTGCA TCTGCCCGCTGGCGATCAGT
Product: ferripyoverdine receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MRVPSPSLPSVSMPVALLRSVRAHSRLLLALQCAGALCATAAHAQDNAPAPTANTLDQVLVTGRTEGYQVRGTNTATKLP LTLRETPQSLTVFTRQRIEDFNLITIAEVLQQTPGVTVQSYDSNRTLFAARGFAISNFMFDGVPTNYTTGAGGNSILSDT SIYERIEVVRGASGLVTGSGNPSATVNMVRKRPTTAFQASTSLNVGSWDYRRAELDVAGPLTSGGRMRGRVVGAYTEKDS WVRFQQDRSPSMYGVLEADLTDSTRLRAGIDHLATHSDGGAWSAAPLFFSDGTPARLPRSYSAAARWNRWERESTNVFAT LEQQFAGGWSGRLAYNHRATDTDSLLFAGSNSASFADARTGLGLRVSDTYGVSETRENALDLYASGPFQWLGRAHELVVG ANHYDRDLGTLRTAITARPYSLTAFPSIFDWNGDVGRPTTTNAGIPSSITNTQETGYYAAVRLNPTDALKLIGGGRYSSW NTATDNYSPANQFTGRSADYDADALTPYLGAIYDLSRHLSAFVSYSDVFQAQNLRDRTNQQLDPVVGANLEYGFKGEFFG GALYAALNGFHMQQDNVAEIDPEVAPNSLPDGSSAYRAVSGVETWGGEFEVSGAITPDWSMTGGYTYAYSTDQRGARVFT TSPMHLARFNTTYRFGDWTLGGGISWQSAVYQNQTIPTGRFTAAGAPITRSGRVTQGGYLLVDLMGRYRINEQLSVGVTV TNLFDKVYYRNVGFFNSGYWGEPRRLLFNLRANF
Sequences:
>Translated_754_residues MRVPSPSLPSVSMPVALLRSVRAHSRLLLALQCAGALCATAAHAQDNAPAPTANTLDQVLVTGRTEGYQVRGTNTATKLP LTLRETPQSLTVFTRQRIEDFNLITIAEVLQQTPGVTVQSYDSNRTLFAARGFAISNFMFDGVPTNYTTGAGGNSILSDT SIYERIEVVRGASGLVTGSGNPSATVNMVRKRPTTAFQASTSLNVGSWDYRRAELDVAGPLTSGGRMRGRVVGAYTEKDS WVRFQQDRSPSMYGVLEADLTDSTRLRAGIDHLATHSDGGAWSAAPLFFSDGTPARLPRSYSAAARWNRWERESTNVFAT LEQQFAGGWSGRLAYNHRATDTDSLLFAGSNSASFADARTGLGLRVSDTYGVSETRENALDLYASGPFQWLGRAHELVVG ANHYDRDLGTLRTAITARPYSLTAFPSIFDWNGDVGRPTTTNAGIPSSITNTQETGYYAAVRLNPTDALKLIGGGRYSSW NTATDNYSPANQFTGRSADYDADALTPYLGAIYDLSRHLSAFVSYSDVFQAQNLRDRTNQQLDPVVGANLEYGFKGEFFG GALYAALNGFHMQQDNVAEIDPEVAPNSLPDGSSAYRAVSGVETWGGEFEVSGAITPDWSMTGGYTYAYSTDQRGARVFT TSPMHLARFNTTYRFGDWTLGGGISWQSAVYQNQTIPTGRFTAAGAPITRSGRVTQGGYLLVDLMGRYRINEQLSVGVTV TNLFDKVYYRNVGFFNSGYWGEPRRLLFNLRANF >Mature_754_residues MRVPSPSLPSVSMPVALLRSVRAHSRLLLALQCAGALCATAAHAQDNAPAPTANTLDQVLVTGRTEGYQVRGTNTATKLP LTLRETPQSLTVFTRQRIEDFNLITIAEVLQQTPGVTVQSYDSNRTLFAARGFAISNFMFDGVPTNYTTGAGGNSILSDT SIYERIEVVRGASGLVTGSGNPSATVNMVRKRPTTAFQASTSLNVGSWDYRRAELDVAGPLTSGGRMRGRVVGAYTEKDS WVRFQQDRSPSMYGVLEADLTDSTRLRAGIDHLATHSDGGAWSAAPLFFSDGTPARLPRSYSAAARWNRWERESTNVFAT LEQQFAGGWSGRLAYNHRATDTDSLLFAGSNSASFADARTGLGLRVSDTYGVSETRENALDLYASGPFQWLGRAHELVVG ANHYDRDLGTLRTAITARPYSLTAFPSIFDWNGDVGRPTTTNAGIPSSITNTQETGYYAAVRLNPTDALKLIGGGRYSSW NTATDNYSPANQFTGRSADYDADALTPYLGAIYDLSRHLSAFVSYSDVFQAQNLRDRTNQQLDPVVGANLEYGFKGEFFG GALYAALNGFHMQQDNVAEIDPEVAPNSLPDGSSAYRAVSGVETWGGEFEVSGAITPDWSMTGGYTYAYSTDQRGARVFT TSPMHLARFNTTYRFGDWTLGGGISWQSAVYQNQTIPTGRFTAAGAPITRSGRVTQGGYLLVDLMGRYRINEQLSVGVTV TNLFDKVYYRNVGFFNSGYWGEPRRLLFNLRANF
Specific function: Receptor for the siderophore ferripyoverdine [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=735, Percent_Identity=34.421768707483, Blast_Score=394, Evalue=1e-110, Organism=Escherichia coli, GI1786344, Length=773, Percent_Identity=23.156532988357, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1787024, Length=271, Percent_Identity=26.9372693726937, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 82060; Mature: 82060
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVPSPSLPSVSMPVALLRSVRAHSRLLLALQCAGALCATAAHAQDNAPAPTANTLDQVL CCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHE VTGRTEGYQVRGTNTATKLPLTLRETPQSLTVFTRQRIEDFNLITIAEVLQQTPGVTVQS EECCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHCCCCEEEE YDSNRTLFAARGFAISNFMFDGVPTNYTTGAGGNSILSDTSIYERIEVVRGASGLVTGSG CCCCCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCC NPSATVNMVRKRPTTAFQASTSLNVGSWDYRRAELDVAGPLTSGGRMRGRVVGAYTEKDS CCCEEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC WVRFQQDRSPSMYGVLEADLTDSTRLRAGIDHLATHSDGGAWSAAPLFFSDGTPARLPRS EEEEECCCCCCEEEEEEECCCCCHHHHHCHHHHHCCCCCCCEEECEEEECCCCCCCCCCC YSAAARWNRWERESTNVFATLEQQFAGGWSGRLAYNHRATDTDSLLFAGSNSASFADART HHHHHHHCCCCCCCCCEEEEEHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCCHHHC GLGLRVSDTYGVSETRENALDLYASGPFQWLGRAHELVVGANHYDRDLGTLRTAITARPY CCCEEEECCCCCCHHHCCCEEEEECCCHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCE SLTAFPSIFDWNGDVGRPTTTNAGIPSSITNTQETGYYAAVRLNPTDALKLIGGGRYSSW EEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHEEEECCCCCCCC NTATDNYSPANQFTGRSADYDADALTPYLGAIYDLSRHLSAFVSYSDVFQAQNLRDRTNQ CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QLDPVVGANLEYGFKGEFFGGALYAALNGFHMQQDNVAEIDPEVAPNSLPDGSSAYRAVS CCCCHHCCCCCCCCCCCCCCHHHHHHHCCCEECCCCHHHCCCCCCCCCCCCCCHHHHHHC GVETWGGEFEVSGAITPDWSMTGGYTYAYSTDQRGARVFTTSPMHLARFNTTYRFGDWTL CHHHCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEECCEEEECCEEE GGGISWQSAVYQNQTIPTGRFTAAGAPITRSGRVTQGGYLLVDLMGRYRINEQLSVGVTV CCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEH TNLFDKVYYRNVGFFNSGYWGEPRRLLFNLRANF HHHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCC >Mature Secondary Structure MRVPSPSLPSVSMPVALLRSVRAHSRLLLALQCAGALCATAAHAQDNAPAPTANTLDQVL CCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHE VTGRTEGYQVRGTNTATKLPLTLRETPQSLTVFTRQRIEDFNLITIAEVLQQTPGVTVQS EECCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHCCCCEEEE YDSNRTLFAARGFAISNFMFDGVPTNYTTGAGGNSILSDTSIYERIEVVRGASGLVTGSG CCCCCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCC NPSATVNMVRKRPTTAFQASTSLNVGSWDYRRAELDVAGPLTSGGRMRGRVVGAYTEKDS CCCEEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCC WVRFQQDRSPSMYGVLEADLTDSTRLRAGIDHLATHSDGGAWSAAPLFFSDGTPARLPRS EEEEECCCCCCEEEEEEECCCCCHHHHHCHHHHHCCCCCCCEEECEEEECCCCCCCCCCC YSAAARWNRWERESTNVFATLEQQFAGGWSGRLAYNHRATDTDSLLFAGSNSASFADART HHHHHHHCCCCCCCCCEEEEEHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCCHHHC GLGLRVSDTYGVSETRENALDLYASGPFQWLGRAHELVVGANHYDRDLGTLRTAITARPY CCCEEEECCCCCCHHHCCCEEEEECCCHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCE SLTAFPSIFDWNGDVGRPTTTNAGIPSSITNTQETGYYAAVRLNPTDALKLIGGGRYSSW EEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHEEEECCCCCCCC NTATDNYSPANQFTGRSADYDADALTPYLGAIYDLSRHLSAFVSYSDVFQAQNLRDRTNQ CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QLDPVVGANLEYGFKGEFFGGALYAALNGFHMQQDNVAEIDPEVAPNSLPDGSSAYRAVS CCCCHHCCCCCCCCCCCCCCHHHHHHHCCCEECCCCHHHCCCCCCCCCCCCCCHHHHHHC GVETWGGEFEVSGAITPDWSMTGGYTYAYSTDQRGARVFTTSPMHLARFNTTYRFGDWTL CHHHCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEECCEEEECCEEE GGGISWQSAVYQNQTIPTGRFTAAGAPITRSGRVTQGGYLLVDLMGRYRINEQLSVGVTV CCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEH TNLFDKVYYRNVGFFNSGYWGEPRRLLFNLRANF HHHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335619; 8918232; 10984043 [H]