| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is phnN [H]
Identifier: 66045498
GI number: 66045498
Start: 2622773
End: 2623339
Strand: Direct
Name: phnN [H]
Synonym: Psyr_2258
Alternate gene names: 66045498
Gene position: 2622773-2623339 (Clockwise)
Preceding gene: 66045497
Following gene: 66045499
Centisome position: 43.04
GC content: 64.55
Gene sequence:
>567_bases ATGGTTGGCAGGTTGATCTATCTCATCGGGCCGTCCGGATCAGGCAAGGACAGCCTGCTGGACGCGGCCCGGGATACCCT GGCGCAACGTGATTGCCGGATCGTTCGGCGGGTCATCACCCGTTCCGCCGAAGCGGTGGGCGAGGCGGCGCAGGCGGTGA CTGTCGAGCAGTTCGAGCAGATGCGCGAGCGAGGCGCGTTCGCCCTGAGCTGGCAGGCCAATGGTCTGCACTACGGCATT CCCGTCGAGATCGATCAGTGGCTGCTGGAAGGCCATGACGTCCTGATCAACGGCTCCCGGGCGCATCTGCAAAAGGCGCA GGCGCGCTATCCCACGCTGCTGGCGGTGTTGCTGACGGTCAATCAGGAGGTGTTGCGCAAGCGCCTGCTGGCACGCAACC GGGAAAGCCTCGCGGAAATCGAGGAGCGCCTTGCGCGCAACTCGCGCTTTGCCGGAGATTTGCTGGCGAGCAACCCGCAG GTCTTCCCGCTGGATAATTCCGCTGACCTGCAACACACCGTTGCCACGCTGCTCGGCTTGCTCGACAAGCGTCACGCATG CGCCTGA
Upstream 100 bases:
>100_bases AAATACGTGTCGGGCTGCGCGCAGATCTGATCCAGGCACGTGATCATGCCGGCCTGCCGGTTATCGACAAGGTCTGGCGA CAAGGCAAGAGGGTGTTTTG
Downstream 100 bases:
>100_bases CCCTGCTGGGCACCGGTGACGCCCGACAGGTGCCGGTCTACGGTTGTCAGTGTGTGGCGTGTGCTGCCGCGCATGCCGAC CATGATCTGCGCCGCTTGCC
Product: guanylate kinase/L-type calcium channel region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MVGRLIYLIGPSGSGKDSLLDAARDTLAQRDCRIVRRVITRSAEAVGEAAQAVTVEQFEQMRERGAFALSWQANGLHYGI PVEIDQWLLEGHDVLINGSRAHLQKAQARYPTLLAVLLTVNQEVLRKRLLARNRESLAEIEERLARNSRFAGDLLASNPQ VFPLDNSADLQHTVATLLGLLDKRHACA
Sequences:
>Translated_188_residues MVGRLIYLIGPSGSGKDSLLDAARDTLAQRDCRIVRRVITRSAEAVGEAAQAVTVEQFEQMRERGAFALSWQANGLHYGI PVEIDQWLLEGHDVLINGSRAHLQKAQARYPTLLAVLLTVNQEVLRKRLLARNRESLAEIEERLARNSRFAGDLLASNPQ VFPLDNSADLQHTVATLLGLLDKRHACA >Mature_188_residues MVGRLIYLIGPSGSGKDSLLDAARDTLAQRDCRIVRRVITRSAEAVGEAAQAVTVEQFEQMRERGAFALSWQANGLHYGI PVEIDQWLLEGHDVLINGSRAHLQKAQARYPTLLAVLLTVNQEVLRKRLLARNRESLAEIEERLARNSRFAGDLLASNPQ VFPLDNSADLQHTVATLLGLLDKRHACA
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3709
COG function: function code P; Uncharacterized component of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790532, Length=192, Percent_Identity=47.9166666666667, Blast_Score=150, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR012699 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: NA
Molecular weight: Translated: 20829; Mature: 20829
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGRLIYLIGPSGSGKDSLLDAARDTLAQRDCRIVRRVITRSAEAVGEAAQAVTVEQFEQ CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRERGAFALSWQANGLHYGIPVEIDQWLLEGHDVLINGSRAHLQKAQARYPTLLAVLLTV HHHCCCEEEEEECCCEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH NQEVLRKRLLARNRESLAEIEERLARNSRFAGDLLASNPQVFPLDNSADLQHTVATLLGL CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHH LDKRHACA HHHHHCCC >Mature Secondary Structure MVGRLIYLIGPSGSGKDSLLDAARDTLAQRDCRIVRRVITRSAEAVGEAAQAVTVEQFEQ CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRERGAFALSWQANGLHYGIPVEIDQWLLEGHDVLINGSRAHLQKAQARYPTLLAVLLTV HHHCCCEEEEEECCCEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH NQEVLRKRLLARNRESLAEIEERLARNSRFAGDLLASNPQVFPLDNSADLQHTVATLLGL CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHH LDKRHACA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]