| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is phnM [H]
Identifier: 66045497
GI number: 66045497
Start: 2621628
End: 2622773
Strand: Direct
Name: phnM [H]
Synonym: Psyr_2257
Alternate gene names: 66045497
Gene position: 2621628-2622773 (Clockwise)
Preceding gene: 66045496
Following gene: 66045498
Centisome position: 43.02
GC content: 62.48
Gene sequence:
>1146_bases ATGCTGAACGAACAGGTTTTCAGTAACGCCCGCGTGGTGACGGCCGAGCAGGTATTCACCGGCACTGTGGTGGTCCGTGA CGGCCTGATTGCCGAGGTCGAGAGTGGATGCAGCCAGTTGAGTCAGGCTCAGGACATGCAGGGCGATTACCTGCTGCCGG GGCTGGTGGAATTGCACACCGACAACCTCGAAAAGCACCTGTCGCCGCGTCCGGGTGTCGACTGGCCGTCGATGTCGGCG GTGATCAGCCACGATGCGCAAATCGTCGCGGCGGGGATCACCACGGTGTTCGACGCACTGTCGATCGGCGACATCAACCC CAAAGGCAAGCGCATGCAACAATTGCCCGCCATGCTGCAGGCGATTGCCGACGCCAACGCGGCAGGCCTGACTCGTGCCG AGCACCTGCTGCACCTGCGCTGCGAGGTCAGCCACCCGGATACCTTGAGCGTGTTTCGCGATCTGGTGGACCAGCCACTG GTGCAACTGGTCTCGGTGATGGACCACGCGCCCGGCCAGCGTCAGTTTGCCCTGGAGTCCAAGTACCGCGAGTACTACAT GGGCAAGTACCACATGAACAACGAGGAAATGGACCGTTTCATCGTTGAACAGGTGGCCAACTCCAACGAGTACGCCGACC GTTACCGGCGTGCGATCGTCGAACTGTGCCTGGCGCGCGGCCTGTCGATTGCCAGCCACGACGATGCAACCATGGCGCAT GTCGAGGAGTCGGCGGGTTTCGGCATGAACATCGCCGAGTTCCCGACCACACTCGAAGCGGCCCGTGGCTGTCGGCAACT GGGCATGAGCGTGTTGATGGGCGCACCGAACATCGTGCGCGGCGGCTCGCACTCCGGTAACGTGGCGGCAGCATCGCTGG CCACGGACGGGCTGCTGGATATTCTGTCCAGCGATTACTACCCGGCCAGCTTGTTGCAGGCTGCATTCATGCTCGCCGCT CAGGACAACGCATGTGACCTGCCGCAGGCGATCAACATGGTCAGCCACACGCCGGCCGTGGCTGCCGGGTTGGCGGATCG TGGTGAAATACGTGTCGGGCTGCGCGCAGATCTGATCCAGGCACGTGATCATGCCGGCCTGCCGGTTATCGACAAGGTCT GGCGACAAGGCAAGAGGGTGTTTTGA
Upstream 100 bases:
>100_bases CGCTGATCGGTATTTTCCATGACCGCGATGCCCGCGAGGCAGTCGCCAATCGTCAACTCGACATGACCCCGGTGGACCTC ACCGCCAAGGAGTTGCTGCA
Downstream 100 bases:
>100_bases TGGTTGGCAGGTTGATCTATCTCATCGGGCCGTCCGGATCAGGCAAGGACAGCCTGCTGGACGCGGCCCGGGATACCCTG GCGCAACGTGATTGCCGGAT
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MLNEQVFSNARVVTAEQVFTGTVVVRDGLIAEVESGCSQLSQAQDMQGDYLLPGLVELHTDNLEKHLSPRPGVDWPSMSA VISHDAQIVAAGITTVFDALSIGDINPKGKRMQQLPAMLQAIADANAAGLTRAEHLLHLRCEVSHPDTLSVFRDLVDQPL VQLVSVMDHAPGQRQFALESKYREYYMGKYHMNNEEMDRFIVEQVANSNEYADRYRRAIVELCLARGLSIASHDDATMAH VEESAGFGMNIAEFPTTLEAARGCRQLGMSVLMGAPNIVRGGSHSGNVAAASLATDGLLDILSSDYYPASLLQAAFMLAA QDNACDLPQAINMVSHTPAVAAGLADRGEIRVGLRADLIQARDHAGLPVIDKVWRQGKRVF
Sequences:
>Translated_381_residues MLNEQVFSNARVVTAEQVFTGTVVVRDGLIAEVESGCSQLSQAQDMQGDYLLPGLVELHTDNLEKHLSPRPGVDWPSMSA VISHDAQIVAAGITTVFDALSIGDINPKGKRMQQLPAMLQAIADANAAGLTRAEHLLHLRCEVSHPDTLSVFRDLVDQPL VQLVSVMDHAPGQRQFALESKYREYYMGKYHMNNEEMDRFIVEQVANSNEYADRYRRAIVELCLARGLSIASHDDATMAH VEESAGFGMNIAEFPTTLEAARGCRQLGMSVLMGAPNIVRGGSHSGNVAAASLATDGLLDILSSDYYPASLLQAAFMLAA QDNACDLPQAINMVSHTPAVAAGLADRGEIRVGLRADLIQARDHAGLPVIDKVWRQGKRVF >Mature_381_residues MLNEQVFSNARVVTAEQVFTGTVVVRDGLIAEVESGCSQLSQAQDMQGDYLLPGLVELHTDNLEKHLSPRPGVDWPSMSA VISHDAQIVAAGITTVFDALSIGDINPKGKRMQQLPAMLQAIADANAAGLTRAEHLLHLRCEVSHPDTLSVFRDLVDQPL VQLVSVMDHAPGQRQFALESKYREYYMGKYHMNNEEMDRFIVEQVANSNEYADRYRRAIVELCLARGLSIASHDDATMAH VEESAGFGMNIAEFPTTLEAARGCRQLGMSVLMGAPNIVRGGSHSGNVAAASLATDGLLDILSSDYYPASLLQAAFMLAA QDNACDLPQAINMVSHTPAVAAGLADRGEIRVGLRADLIQARDHAGLPVIDKVWRQGKRVF
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3454
COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790533, Length=377, Percent_Identity=54.6419098143236, Blast_Score=404, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 - InterPro: IPR012696 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 41360; Mature: 41360
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNEQVFSNARVVTAEQVFTGTVVVRDGLIAEVESGCSQLSQAQDMQGDYLLPGLVELHT CCCHHHHCCCEEEEHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH DNLEKHLSPRPGVDWPSMSAVISHDAQIVAAGITTVFDALSIGDINPKGKRMQQLPAMLQ HHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AIADANAAGLTRAEHLLHLRCEVSHPDTLSVFRDLVDQPLVQLVSVMDHAPGQRQFALES HHHCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KYREYYMGKYHMNNEEMDRFIVEQVANSNEYADRYRRAIVELCLARGLSIASHDDATMAH HHHHHHCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH VEESAGFGMNIAEFPTTLEAARGCRQLGMSVLMGAPNIVRGGSHSGNVAAASLATDGLLD HHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHH ILSSDYYPASLLQAAFMLAAQDNACDLPQAINMVSHTPAVAAGLADRGEIRVGLRADLIQ HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCEEECHHHHHHH ARDHAGLPVIDKVWRQGKRVF HHCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure MLNEQVFSNARVVTAEQVFTGTVVVRDGLIAEVESGCSQLSQAQDMQGDYLLPGLVELHT CCCHHHHCCCEEEEHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH DNLEKHLSPRPGVDWPSMSAVISHDAQIVAAGITTVFDALSIGDINPKGKRMQQLPAMLQ HHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AIADANAAGLTRAEHLLHLRCEVSHPDTLSVFRDLVDQPLVQLVSVMDHAPGQRQFALES HHHCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KYREYYMGKYHMNNEEMDRFIVEQVANSNEYADRYRRAIVELCLARGLSIASHDDATMAH HHHHHHCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH VEESAGFGMNIAEFPTTLEAARGCRQLGMSVLMGAPNIVRGGSHSGNVAAASLATDGLLD HHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHH ILSSDYYPASLLQAAFMLAAQDNACDLPQAINMVSHTPAVAAGLADRGEIRVGLRADLIQ HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCEEECHHHHHHH ARDHAGLPVIDKVWRQGKRVF HHCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]