| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is phnP [H]
Identifier: 66045499
GI number: 66045499
Start: 2623330
End: 2624082
Strand: Direct
Name: phnP [H]
Synonym: Psyr_2259
Alternate gene names: 66045499
Gene position: 2623330-2624082 (Clockwise)
Preceding gene: 66045498
Following gene: 66045508
Centisome position: 43.05
GC content: 64.94
Gene sequence:
>753_bases ATGCGCCTGACCCTGCTGGGCACCGGTGACGCCCGACAGGTGCCGGTCTACGGTTGTCAGTGTGTGGCGTGTGCTGCCGC GCATGCCGACCATGATCTGCGCCGCTTGCCGTGCAGCGCGCTGATCGAATGCGCCGACCAGCGCTGGTTGATCGACAGTG GCCTGACCGACCTCACCGAGCGTTTCCCGCCGCGCAGCCTGAGCGGGATTCTGCAGACGCATTACCACGCCGACCATGCG CAGGGGCTGTTGCACCTGCGCTGGGGCCAGGGGCTGGTGATTCCGGTGCACGGCCCGGCGGATCCGGAAGGCCTGGCCGA CCTCTACAAACACCCCGGCATTCTGGATTTCAGCCAGCCATTCGCGGCCTTCGAACGCCGTGCACTGGGCGCGTTGCAGG TCACAGCGCTGCCACTGACGCACTCAAAGCCTACGTTCGGCTACCTGTTCGAAGGTGACGGGCAACGTTTTGCCTACCTG ACCGACACCGTCGGCCTGCCCGACGACACCCGCGAGTACCTGCAACGTGCACCGCTGGATCTGCTGGTGCTCGACTGCTC GATGCCTCCACAGCCTCAGCCGCCGCGTAATCACAACGACCTGACCCTGGCGCTGCAAACCATCGAGTGGCTAAGACCGG GCAGGGCGGTGCTGACGCACGTCGGCCATACGCTGGATGCGTGGTTGATGGAGCACTCCAAACAGTTGCCGGGCAATGTA GTGGTGGGGAGGGATGGTATGACGGTGGTCTGA
Upstream 100 bases:
>100_bases ATTTGCTGGCGAGCAACCCGCAGGTCTTCCCGCTGGATAATTCCGCTGACCTGCAACACACCGTTGCCACGCTGCTCGGC TTGCTCGACAAGCGTCACGC
Downstream 100 bases:
>100_bases GCGACGTCTTCACATCGCCCCGATCTCCGGCTTGCCCGTTCTCGACCCGCCATAAATCGGCGGATGCGTGACGATGTGGG TCAGGTCGACCGCCGAGGCC
Product: carbon-phosphorus lyase complex accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MRLTLLGTGDARQVPVYGCQCVACAAAHADHDLRRLPCSALIECADQRWLIDSGLTDLTERFPPRSLSGILQTHYHADHA QGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGILDFSQPFAAFERRALGALQVTALPLTHSKPTFGYLFEGDGQRFAYL TDTVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVGHTLDAWLMEHSKQLPGNV VVGRDGMTVV
Sequences:
>Translated_250_residues MRLTLLGTGDARQVPVYGCQCVACAAAHADHDLRRLPCSALIECADQRWLIDSGLTDLTERFPPRSLSGILQTHYHADHA QGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGILDFSQPFAAFERRALGALQVTALPLTHSKPTFGYLFEGDGQRFAYL TDTVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVGHTLDAWLMEHSKQLPGNV VVGRDGMTVV >Mature_250_residues MRLTLLGTGDARQVPVYGCQCVACAAAHADHDLRRLPCSALIECADQRWLIDSGLTDLTERFPPRSLSGILQTHYHADHA QGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGILDFSQPFAAFERRALGALQVTALPLTHSKPTFGYLFEGDGQRFAYL TDTVGLPDDTREYLQRAPLDLLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVGHTLDAWLMEHSKQLPGNV VVGRDGMTVV
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790530, Length=242, Percent_Identity=49.5867768595041, Blast_Score=229, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017693 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 27579; Mature: 27579
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTLLGTGDARQVPVYGCQCVACAAAHADHDLRRLPCSALIECADQRWLIDSGLTDLTE CEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCEEECCCHHHHHH RFPPRSLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGILDFSQP HCCCHHHHHHHHHHHCCHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCH FAAFERRALGALQVTALPLTHSKPTFGYLFEGDGQRFAYLTDTVGLPDDTREYLQRAPLD HHHHHHHHCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCE LLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVGHTLDAWLMEHSKQLPGNV EEEEECCCCCCCCCCCCCCCEEEHEEHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCE VVGRDGMTVV EECCCCCEEC >Mature Secondary Structure MRLTLLGTGDARQVPVYGCQCVACAAAHADHDLRRLPCSALIECADQRWLIDSGLTDLTE CEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCEEECCCHHHHHH RFPPRSLSGILQTHYHADHAQGLLHLRWGQGLVIPVHGPADPEGLADLYKHPGILDFSQP HCCCHHHHHHHHHHHCCHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCH FAAFERRALGALQVTALPLTHSKPTFGYLFEGDGQRFAYLTDTVGLPDDTREYLQRAPLD HHHHHHHHCCEEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCE LLVLDCSMPPQPQPPRNHNDLTLALQTIEWLRPGRAVLTHVGHTLDAWLMEHSKQLPGNV EEEEECCCCCCCCCCCCCCCEEEHEEHHHHHCCCHHHHHHHCHHHHHHHHHHHHCCCCCE VVGRDGMTVV EECCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]