| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045399
Identifier: 66045399
GI number: 66045399
Start: 2514164
End: 2514505
Strand: Direct
Name: 66045399
Synonym: Psyr_2159
Alternate gene names: NA
Gene position: 2514164-2514505 (Clockwise)
Preceding gene: 66045397
Following gene: 66045402
Centisome position: 41.26
GC content: 60.53
Gene sequence:
>342_bases ATGCCCCGGAAATTCGCAACATTGGGTTTTATGGTCGTGGCTTCATTGATGGCAGGCTGCAGCAGTACGGCGTCTGATAG CAGTGCCAGTGCTGAAGCGCCCGTCAAGGCCGACGCGCCAGCCAGCAACGCGATACCTGGCCGCTGTGATGCAGGGCTTG CCCAGTTCGCCATTGGCAAGCAGGCGTCCATCGACCTCCTTTCTCAAGTCCGCGCCCGTTCCGGTTCGCAGGATGCGCGC ATTCTCGGTCCTGACGACATGGTCACGCTGGAATACCGATCCGAGCGGGTAAACGTCAACACCGACGCGTCGGGGAAGGT GACCCGTATCAATTGCGGCTGA
Upstream 100 bases:
>100_bases GATCAACAGGTTACACAAGGCATGTCGGTCGGACCGTGCAACCAACGCGCCTGAGCGCGGTCGGACAGGTCTGGAAATGT TCATTGGCAGAGGAGGGTGT
Downstream 100 bases:
>100_bases GCCGGTACTTTCTTTTGCGCATAAAAAAACCCCGTCAGTGACGGGGTTTTTTTTGTGTCAGGTGAATCAGGCCACCTGAA CTTCTTCTGCCTGCATGCCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPRKFATLGFMVVASLMAGCSSTASDSSASAEAPVKADAPASNAIPGRCDAGLAQFAIGKQASIDLLSQVRARSGSQDAR ILGPDDMVTLEYRSERVNVNTDASGKVTRINCG
Sequences:
>Translated_113_residues MPRKFATLGFMVVASLMAGCSSTASDSSASAEAPVKADAPASNAIPGRCDAGLAQFAIGKQASIDLLSQVRARSGSQDAR ILGPDDMVTLEYRSERVNVNTDASGKVTRINCG >Mature_112_residues PRKFATLGFMVVASLMAGCSSTASDSSASAEAPVKADAPASNAIPGRCDAGLAQFAIGKQASIDLLSQVRARSGSQDARI LGPDDMVTLEYRSERVNVNTDASGKVTRINCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11650; Mature: 11519
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKFATLGFMVVASLMAGCSSTASDSSASAEAPVKADAPASNAIPGRCDAGLAQFAIGK CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC QASIDLLSQVRARSGSQDARILGPDDMVTLEYRSERVNVNTDASGKVTRINCG CCHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCEECCCCCCCCCEEEEECC >Mature Secondary Structure PRKFATLGFMVVASLMAGCSSTASDSSASAEAPVKADAPASNAIPGRCDAGLAQFAIGK CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC QASIDLLSQVRARSGSQDARILGPDDMVTLEYRSERVNVNTDASGKVTRINCG CCHHHHHHHHHHCCCCCCCEEECCCCEEEEEECCCEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA