Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66044431
Identifier: 66044431
GI number: 66044431
Start: 1334228
End: 1334713
Strand: Reverse
Name: 66044431
Synonym: Psyr_1180
Alternate gene names: NA
Gene position: 1334713-1334228 (Counterclockwise)
Preceding gene: 66044432
Following gene: 66044430
Centisome position: 21.9
GC content: 55.56
Gene sequence:
>486_bases ATGCTCGCCCCCAAACTTCACCTCCTGTGCGGCAAGATCGCATCCGGTAAATCGACACTGGCAAAATCAATCGCGACTAA GCATTCAGCGATCCTGTTGAGTGAAGATCAATGGCTCTCCCGGCTCTACCCTGACGAGATCAAATCAGTGGCGGACTACG TGCGCCTGGCCCATCGGATTCGCGACATCATCGGCCCTCTGGTCATCGACATGCTGAAGTCCGGCATGTGCGTGGTTCTG GATTTCCCTGCCAATACGCTCGCCGACCGCCAGTGGCTTCGCAGCCTGGCTGAAGACGCGCAAATTAAGCATCGACTGCA CTATCTCGACGTGGCAGATGATATTTGCCTTGCCAGACTGCATGCTCGCAACCAAAGAGCCGAGCATGACTTTGCGGCCA CAGATGCGGAGTTCAGGCTGATCACACGCTACTTCCAGATTCCGCACACTGACGAGGGGCTGGATATTCTGGTTCACCGC TTGTAA
Upstream 100 bases:
>100_bases ATGATGGGCTTAATGTGCTTGGCTGACAGGCCCCCGCAGAGCTCAGGACTTACCTCTGTTCAGGAATGCACGTCTTACGA CTGAAAAAGGACACGACTTG
Downstream 100 bases:
>100_bases TTCATCAGAAGGCGCGTGGTGATGTCCTTCAAACAGTCTGATATCTGATGTTCCTGCAACAGGCACCCTGCGTAACCGGT CGGCGAAAACCGGAACAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLAPKLHLLCGKIASGKSTLAKSIATKHSAILLSEDQWLSRLYPDEIKSVADYVRLAHRIRDIIGPLVIDMLKSGMCVVL DFPANTLADRQWLRSLAEDAQIKHRLHYLDVADDICLARLHARNQRAEHDFAATDAEFRLITRYFQIPHTDEGLDILVHR L
Sequences:
>Translated_161_residues MLAPKLHLLCGKIASGKSTLAKSIATKHSAILLSEDQWLSRLYPDEIKSVADYVRLAHRIRDIIGPLVIDMLKSGMCVVL DFPANTLADRQWLRSLAEDAQIKHRLHYLDVADDICLARLHARNQRAEHDFAATDAEFRLITRYFQIPHTDEGLDILVHR L >Mature_161_residues MLAPKLHLLCGKIASGKSTLAKSIATKHSAILLSEDQWLSRLYPDEIKSVADYVRLAHRIRDIIGPLVIDMLKSGMCVVL DFPANTLADRQWLRSLAEDAQIKHRLHYLDVADDICLARLHARNQRAEHDFAATDAEFRLITRYFQIPHTDEGLDILVHR L
Specific function: Unknown
COG id: COG0645
COG function: function code R; Predicted kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18316; Mature: 18316
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAPKLHLLCGKIASGKSTLAKSIATKHSAILLSEDQWLSRLYPDEIKSVADYVRLAHRI CCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCHHHHHHCCHHHHHHHHHHHHHHHHH RDIIGPLVIDMLKSGMCVVLDFPANTLADRQWLRSLAEDAQIKHRLHYLDVADDICLARL HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HARNQRAEHDFAATDAEFRLITRYFQIPHTDEGLDILVHRL HHHCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCC >Mature Secondary Structure MLAPKLHLLCGKIASGKSTLAKSIATKHSAILLSEDQWLSRLYPDEIKSVADYVRLAHRI CCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCHHHHHHCCHHHHHHHHHHHHHHHHH RDIIGPLVIDMLKSGMCVVLDFPANTLADRQWLRSLAEDAQIKHRLHYLDVADDICLARL HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HARNQRAEHDFAATDAEFRLITRYFQIPHTDEGLDILVHRL HHHCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA