Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is yidQ [C]
Identifier: 66044432
GI number: 66044432
Start: 1334788
End: 1335075
Strand: Reverse
Name: yidQ [C]
Synonym: Psyr_1181
Alternate gene names: 66044432
Gene position: 1335075-1334788 (Counterclockwise)
Preceding gene: 66044433
Following gene: 66044431
Centisome position: 21.91
GC content: 56.25
Gene sequence:
>288_bases ATGTTCAAGCAATGCCTGTTACTCGCTACGGCCATCTCACTGAGCGGCTGCTGGAGCCTGATGTATCACCTCGATGGTGA GCGTTGCGTCTATCCCGGTACACGGCACGGCTGGGCATGGGGTACTAAAGATGTGACATCGACCTGGCCCTGGTTGATAG ACGTGCCGTTCTCTCTGGCGCTGGACACGCTGTTTCTGCCCTACGACCTCACCGCTTTCCTGCCGGAAAACCTTGGCGGT GATGATCGCGAGTGCCATTTCAATGATGGGCTTAATGTGCTTGGCTGA
Upstream 100 bases:
>100_bases GTCGCCTTTTTTGATCCAGACTCGACGTCACCTGGTTCCCTGTCAGGGCAGTTGGGTAGAATGAAGCACACTTTATGTCG ACGCCAAAACAAGGGAATGT
Downstream 100 bases:
>100_bases CAGGCCCCCGCAGAGCTCAGGACTTACCTCTGTTCAGGAATGCACGTCTTACGACTGAAAAAGGACACGACTTGATGCTC GCCCCCAAACTTCACCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MFKQCLLLATAISLSGCWSLMYHLDGERCVYPGTRHGWAWGTKDVTSTWPWLIDVPFSLALDTLFLPYDLTAFLPENLGG DDRECHFNDGLNVLG
Sequences:
>Translated_95_residues MFKQCLLLATAISLSGCWSLMYHLDGERCVYPGTRHGWAWGTKDVTSTWPWLIDVPFSLALDTLFLPYDLTAFLPENLGG DDRECHFNDGLNVLG >Mature_95_residues MFKQCLLLATAISLSGCWSLMYHLDGERCVYPGTRHGWAWGTKDVTSTWPWLIDVPFSLALDTLFLPYDLTAFLPENLGG DDRECHFNDGLNVLG
Specific function: Unknown
COG id: COG5645
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10695; Mature: 10695
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKQCLLLATAISLSGCWSLMYHLDGERCVYPGTRHGWAWGTKDVTSTWPWLIDVPFSLA CCHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHH LDTLFLPYDLTAFLPENLGGDDRECHFNDGLNVLG HHHHHCCCCHHEECCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure MFKQCLLLATAISLSGCWSLMYHLDGERCVYPGTRHGWAWGTKDVTSTWPWLIDVPFSLA CCHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHH LDTLFLPYDLTAFLPENLGGDDRECHFNDGLNVLG HHHHHCCCCHHEECCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA