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The map label for this gene is scrY [H]

Identifier: 66044018

GI number: 66044018

Start: 869019

End: 870596

Strand: Direct

Name: scrY [H]

Synonym: Psyr_0763

Alternate gene names: 66044018

Gene position: 869019-870596 (Clockwise)

Preceding gene: 66044011

Following gene: 66044022

Centisome position: 14.26

GC content: 60.01

Gene sequence:

>1578_bases
ATGCAGAACGCATCAAGATGGCTACTCGCAGGGGTACTCGGCACCTCGACAACCGTCTCTCAGGCCGCGACGCTGGAAGA
ACGGATGGCCGCTTTTGAAGCCCGTGCCAGCGCTGCGGAAAAACGTGCAGCCGCAGCCGAACAGCAAACCCAGGCGCTCG
CCAGGGAACTGCAGCAACTCAAACTCGCCACCCCCGCTGCGCAGCCTGCCGCGCCCACTTCCGCGCCGACTGTGGCAGCC
AGTCCACAGCCCGCTCTGGATGATCGCGTAGCAAAACTCGAAGCCCGCCAGCAAAGCATGGAGAAGCCAGGCGGTGTCGG
ACACCTCACCGACGGGTTCAGCTTCAAGGGCTATGCTCGCTCCGGCCTGTTGATCAACGACGGATTGGGCGGCGGTCGCG
GCGGGCCTTATACAACCCCCGCGGGTTCAGTCGGTGGGGCGGTCGGGCGCCTCGGTAACGAAGACGACACCTACATGCGC
TTCGATCTGTCGAAAGAGATCTACGCGCAGAACGGCACGCGCTCCAAGTTCACCGTCTCCATCGCCGATGGCGTTGAAAG
CTATAACGACTGGACACCCACCGAAAGCAGCCTGAACGTGCGTCAGGTATTTACCGAACTCGACCACATCGCCGCCTTCA
AGGGTAATTCAGTGTTCGAGAACTCCACCCTGTGGGCCGGCAAGCGCTTCGACAGGGATAATTTCGATATCCACTGGCTG
GACTCGGACGTGGTCTTTCTGGCCGGGACCGGTGGCGGTATCTACGATGTGCAGATGACCAGGGACTGGCGCTCGAACTA
CTCCCTGATCGGACGTAACTACGGAGATTTCAGTGAGGGCGGCGTCGATGCCGATGTGGAAAGCTACATCCTGACCTCCA
ACCAATTCTTCGACAATGGTCAGTGGCAGTGGATGTTCAACGCTATTGGCGCAAGGAAAAACGACGTCGGTACGCGCACC
AATCAAGCCGGTTTTGCACCCGCAGATTCAGGCCTGCACACCATGTTGGCCAATCACCAGAAAGACTTTTTCGGCCGCGA
AGGCTTCTTCAAGACGGCGTTGCTCTATGGGCAGGGCCTGGGTGCACAGGTCAAGGACATCGGCGCCGATGGCGAACTGC
TCGACGACGCCCGCGCGGTGCGTCTGGCCATGTATGGCGAGACGCCTATCGCGCCGGGATGGCGCATCGGCCCGAGCCTG
CTGGCCGAGCAGAGCAAGGACCGCTACGTCAAAGGCGACGATTACCGCTGGCTCACGCTGAACATGCGCCTGGCCAACGA
GATCAACAGCAACTTCGAGATGGCCTACGAGCTGAGTTGGCAAACCATGGACCTCGACCCCAAAGGCTACCTGCAACGCA
ATGCCGTCGATGGTAACTTCTGGAAGTTTACGGTGGCGCCGACCTTCAAGCCGGACATGGGTGACCTGCTCACGCGTCCC
GAACTGCGAGTGTTCGCAAGCCTCATGAACTGGTCTTCGGACCTGGACCGCTACAGCACGACCGGCAACTTCGGCAAAAG
CGACTTCAATTCCGGTGGTGTTTGGCAGTTAGGTATCCAGATGGAGACCTGGTTCTAG

Upstream 100 bases:

>100_bases
GATGTGGCACCCTTTTTTCTTCGATTTGCACAATTTTGTGTTGAGGGAAAAAGGCCCGGCCAACGTCACGAAAACAATAA
AAACAAAACAGGAAGTCCAC

Downstream 100 bases:

>100_bases
GCATCGTATTCAAAGCCCGGCGCTGTGTGCCGGGCTTTGAGTCGTTCTATCGACTGCTACTGGCTAAATGAGCATCGAGA
CAGTCCTACTGACCTGCAAC

Product: porin, LamB type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MQNASRWLLAGVLGTSTTVSQAATLEERMAAFEARASAAEKRAAAAEQQTQALARELQQLKLATPAAQPAAPTSAPTVAA
SPQPALDDRVAKLEARQQSMEKPGGVGHLTDGFSFKGYARSGLLINDGLGGGRGGPYTTPAGSVGGAVGRLGNEDDTYMR
FDLSKEIYAQNGTRSKFTVSIADGVESYNDWTPTESSLNVRQVFTELDHIAAFKGNSVFENSTLWAGKRFDRDNFDIHWL
DSDVVFLAGTGGGIYDVQMTRDWRSNYSLIGRNYGDFSEGGVDADVESYILTSNQFFDNGQWQWMFNAIGARKNDVGTRT
NQAGFAPADSGLHTMLANHQKDFFGREGFFKTALLYGQGLGAQVKDIGADGELLDDARAVRLAMYGETPIAPGWRIGPSL
LAEQSKDRYVKGDDYRWLTLNMRLANEINSNFEMAYELSWQTMDLDPKGYLQRNAVDGNFWKFTVAPTFKPDMGDLLTRP
ELRVFASLMNWSSDLDRYSTTGNFGKSDFNSGGVWQLGIQMETWF

Sequences:

>Translated_525_residues
MQNASRWLLAGVLGTSTTVSQAATLEERMAAFEARASAAEKRAAAAEQQTQALARELQQLKLATPAAQPAAPTSAPTVAA
SPQPALDDRVAKLEARQQSMEKPGGVGHLTDGFSFKGYARSGLLINDGLGGGRGGPYTTPAGSVGGAVGRLGNEDDTYMR
FDLSKEIYAQNGTRSKFTVSIADGVESYNDWTPTESSLNVRQVFTELDHIAAFKGNSVFENSTLWAGKRFDRDNFDIHWL
DSDVVFLAGTGGGIYDVQMTRDWRSNYSLIGRNYGDFSEGGVDADVESYILTSNQFFDNGQWQWMFNAIGARKNDVGTRT
NQAGFAPADSGLHTMLANHQKDFFGREGFFKTALLYGQGLGAQVKDIGADGELLDDARAVRLAMYGETPIAPGWRIGPSL
LAEQSKDRYVKGDDYRWLTLNMRLANEINSNFEMAYELSWQTMDLDPKGYLQRNAVDGNFWKFTVAPTFKPDMGDLLTRP
ELRVFASLMNWSSDLDRYSTTGNFGKSDFNSGGVWQLGIQMETWF
>Mature_525_residues
MQNASRWLLAGVLGTSTTVSQAATLEERMAAFEARASAAEKRAAAAEQQTQALARELQQLKLATPAAQPAAPTSAPTVAA
SPQPALDDRVAKLEARQQSMEKPGGVGHLTDGFSFKGYARSGLLINDGLGGGRGGPYTTPAGSVGGAVGRLGNEDDTYMR
FDLSKEIYAQNGTRSKFTVSIADGVESYNDWTPTESSLNVRQVFTELDHIAAFKGNSVFENSTLWAGKRFDRDNFDIHWL
DSDVVFLAGTGGGIYDVQMTRDWRSNYSLIGRNYGDFSEGGVDADVESYILTSNQFFDNGQWQWMFNAIGARKNDVGTRT
NQAGFAPADSGLHTMLANHQKDFFGREGFFKTALLYGQGLGAQVKDIGADGELLDDARAVRLAMYGETPIAPGWRIGPSL
LAEQSKDRYVKGDDYRWLTLNMRLANEINSNFEMAYELSWQTMDLDPKGYLQRNAVDGNFWKFTVAPTFKPDMGDLLTRP
ELRVFASLMNWSSDLDRYSTTGNFGKSDFNSGGVWQLGIQMETWF

Specific function: Porin for sucrose uptake [H]

COG id: COG4580

COG function: function code G; Maltoporin (phage lambda and maltose receptor)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the porin LamB (TC 1.B.3) family [H]

Homologues:

Organism=Escherichia coli, GI1790469, Length=450, Percent_Identity=25.5555555555556, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003192
- ProDom:   PD008788 [H]

Pfam domain/function: PF02264 LamB [H]

EC number: NA

Molecular weight: Translated: 57678; Mature: 57678

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNASRWLLAGVLGTSTTVSQAATLEERMAAFEARASAAEKRAAAAEQQTQALARELQQL
CCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLATPAAQPAAPTSAPTVAASPQPALDDRVAKLEARQQSMEKPGGVGHLTDGFSFKGYAR
HHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SGLLINDGLGGGRGGPYTTPAGSVGGAVGRLGNEDDTYMRFDLSKEIYAQNGTRSKFTVS
CCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHCCCCCCEEEEE
IADGVESYNDWTPTESSLNVRQVFTELDHIAAFKGNSVFENSTLWAGKRFDRDNFDIHWL
ECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCCCCCCEEEEE
DSDVVFLAGTGGGIYDVQMTRDWRSNYSLIGRNYGDFSEGGVDADVESYILTSNQFFDNG
CCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHEEEECCCEECCC
QWQWMFNAIGARKNDVGTRTNQAGFAPADSGLHTMLANHQKDFFGREGFFKTALLYGQGL
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHCCCC
GAQVKDIGADGELLDDARAVRLAMYGETPIAPGWRIGPSLLAEQSKDRYVKGDDYRWLTL
CCHHHHCCCCCCHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEE
NMRLANEINSNFEMAYELSWQTMDLDPKGYLQRNAVDGNFWKFTVAPTFKPDMGDLLTRP
EEEEHHHCCCCCEEEEEEEEEEECCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHCCC
ELRVFASLMNWSSDLDRYSTTGNFGKSDFNSGGVWQLGIQMETWF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MQNASRWLLAGVLGTSTTVSQAATLEERMAAFEARASAAEKRAAAAEQQTQALARELQQL
CCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLATPAAQPAAPTSAPTVAASPQPALDDRVAKLEARQQSMEKPGGVGHLTDGFSFKGYAR
HHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SGLLINDGLGGGRGGPYTTPAGSVGGAVGRLGNEDDTYMRFDLSKEIYAQNGTRSKFTVS
CCEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHCCCCCCEEEEE
IADGVESYNDWTPTESSLNVRQVFTELDHIAAFKGNSVFENSTLWAGKRFDRDNFDIHWL
ECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCCCCCCEEEEE
DSDVVFLAGTGGGIYDVQMTRDWRSNYSLIGRNYGDFSEGGVDADVESYILTSNQFFDNG
CCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHEEEECCCEECCC
QWQWMFNAIGARKNDVGTRTNQAGFAPADSGLHTMLANHQKDFFGREGFFKTALLYGQGL
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHCCCC
GAQVKDIGADGELLDDARAVRLAMYGETPIAPGWRIGPSLLAEQSKDRYVKGDDYRWLTL
CCHHHHCCCCCCHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEE
NMRLANEINSNFEMAYELSWQTMDLDPKGYLQRNAVDGNFWKFTVAPTFKPDMGDLLTRP
EEEEHHHCCCCCEEEEEEEEEEECCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHCCC
ELRVFASLMNWSSDLDRYSTTGNFGKSDFNSGGVWQLGIQMETWF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1846143; 1649946; 9437428 [H]