Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
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Accession | NC_006840 |
Length | 2,897,536 |
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The map label for this gene is 59712621
Identifier: 59712621
GI number: 59712621
Start: 2247421
End: 2249187
Strand: Direct
Name: 59712621
Synonym: VF_2014
Alternate gene names: NA
Gene position: 2247421-2249187 (Clockwise)
Preceding gene: 59712609
Following gene: 59712622
Centisome position: 77.56
GC content: 41.26
Gene sequence:
>1767_bases ATGATGAAAATGAACTCACCTATTCCACCCGAAAAACCTATTTATACCCAAGTGCAGACTTGCGCTCTGGGGTATTACTT ACGCCAGTACAAAACGGCTGAAATTGCCGAAGCGTTGGATATTGCGCCGAGAACGGTTCAACAATGGATTGCTAAATTTG GCTGGAAACAAATGCGTGATGATGCGCCTGTTGAGTTGATGCTTCGACAACGAATTGCGTATTTGCTCTGGGTAGACCAA AAGCATGAATCTCAGCTCAAAGAGCTTGAAACGTTACTTGAACAAAAATACAAACGTGACGCAGCTGAACGTCGACGAAC AACGCCGAAACACTCTGGCGGTTATGTTGATGAGAAACGCGGAAGACCGAGCAATAAAGTTAAAAATGACATTTCGTGTA TTACTGCAGAGATGCTTGCTGATTTTCGTGAAAAAACATTCTTTGCGTATCAAAAAGACATTCACGCTCAAAAATGCAAT GACGAATTAAACGAGTTCCGTTTTTATTTGAAATCTCGCCAAATCGGTTTGACGTATTACTTTGCTTTTGAAGCCTTTGA AGATGCGATCATTAATGGCGATAACCAGGTGTTTTTGTCTGCATCTCGTAAGCAATCTGAAATATTTAAAAACTACATTC GCAAATTTGCGCTTGAGATTGGTGACGTTGAACTCAAAGGTAAAGATGAGCTGCAGTTAAGCAATGGTGCCACGCTTTAC TTTTTATCTACGAACGCAAGAACGAGCCAAGGCTTTAACGGCCACGTTTATTTTGATGAAGTGTTTTGGATCCCTAAATT TGGTGAATTAGATGATTACGCTGGCGGTATGTCTATTCAATCCAAATACCGCACCACTTATTTATCTACGCCATCAACGA CAGCTCACGAAGCTTATCCAAAATGGACAGGTGACAAATCACTTGGCATTGATATTAGCCACAAAGCATTAAAAAAAGGC TCACTTGGCAGCGATGGCATATTCCGCCAAATCATCACGATTGATGATGCGATTGAAGGCGGCGCTACGTTCTTCAATAT GGACAAACTACGCCGTAAATATCCTGATAAATCCGTATTTAATAACTTACTTCGCTGTGTGTTCTTAGATGATGCTTCGT CTTTCTTTAGCATTAAATCACTGCTTGCTTGTAAGACTGATACAGATAATTGGAAAGATGTTGATTTAGAATCGCTTCAC CCGGTTGGCCGTCGTGAAGTGCTTGTTGGATATGATCCGCGAGGTGGCGGACAAGGTGAAGGCGCGGATGATGCAGGGTT AATTGTTTCTCTTAAGCCGATTATTAAAGGGGGTGCGTTCCGATTTATTGAACGTGTTCGCTTAAAAGGCTCTAGTTATG AAGATCAAGCCGCTGCAATTGAAGCTATTTGCAAAAAATACAATGTCGTTTATTTAGCCATTGATGTTGGCGGTGTCGGC TCTGCTGTTGCGGAGTTAGTAAGAAAATTTTATCCAGGCTTAACTACGTTAGATTATTCGCCAGAAATGAAGCGAATGAT GGCATACAAAGCTCGTGAAATTATTAATGCTGGCCGACTTCAATTTGATAATGAGTGGGATGACTTGGTGCATTCTTTCT TAATGATCCGTCAACATACAACAAAAATGAGCAATCAAATTACATTTGTGTCTGCTCGTAACAAAGTAGGCTCTCATGCT GATTTAGCCTGGGCAGCAATGCACGTTTTACATTGGGAGCCTATCGACATTTTACGCGATGACTCAACCACCGTTTCATT CTTATAA
Upstream 100 bases:
>100_bases TTTAGCGAAAATACACGTCTTTTTATATTCATCCTGTTTCTATATTCGGTATATAGAATCCTGATTTACTGAGGGATTTC TTTTGTTATTGCACACTGTA
Downstream 100 bases:
>100_bases GAGAGTATATTTTGATAACTTTTGACGTACCTGAAAGTGTAATGACGAGTGATATTCTCAGTTACATGGAAACCGCACTT GTTGATGGGTTATATGAACC
Product: terminase, ATPase subunit
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Terminase Related Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MMKMNSPIPPEKPIYTQVQTCALGYYLRQYKTAEIAEALDIAPRTVQQWIAKFGWKQMRDDAPVELMLRQRIAYLLWVDQ KHESQLKELETLLEQKYKRDAAERRRTTPKHSGGYVDEKRGRPSNKVKNDISCITAEMLADFREKTFFAYQKDIHAQKCN DELNEFRFYLKSRQIGLTYYFAFEAFEDAIINGDNQVFLSASRKQSEIFKNYIRKFALEIGDVELKGKDELQLSNGATLY FLSTNARTSQGFNGHVYFDEVFWIPKFGELDDYAGGMSIQSKYRTTYLSTPSTTAHEAYPKWTGDKSLGIDISHKALKKG SLGSDGIFRQIITIDDAIEGGATFFNMDKLRRKYPDKSVFNNLLRCVFLDDASSFFSIKSLLACKTDTDNWKDVDLESLH PVGRREVLVGYDPRGGGQGEGADDAGLIVSLKPIIKGGAFRFIERVRLKGSSYEDQAAAIEAICKKYNVVYLAIDVGGVG SAVAELVRKFYPGLTTLDYSPEMKRMMAYKAREIINAGRLQFDNEWDDLVHSFLMIRQHTTKMSNQITFVSARNKVGSHA DLAWAAMHVLHWEPIDILRDDSTTVSFL
Sequences:
>Translated_588_residues MMKMNSPIPPEKPIYTQVQTCALGYYLRQYKTAEIAEALDIAPRTVQQWIAKFGWKQMRDDAPVELMLRQRIAYLLWVDQ KHESQLKELETLLEQKYKRDAAERRRTTPKHSGGYVDEKRGRPSNKVKNDISCITAEMLADFREKTFFAYQKDIHAQKCN DELNEFRFYLKSRQIGLTYYFAFEAFEDAIINGDNQVFLSASRKQSEIFKNYIRKFALEIGDVELKGKDELQLSNGATLY FLSTNARTSQGFNGHVYFDEVFWIPKFGELDDYAGGMSIQSKYRTTYLSTPSTTAHEAYPKWTGDKSLGIDISHKALKKG SLGSDGIFRQIITIDDAIEGGATFFNMDKLRRKYPDKSVFNNLLRCVFLDDASSFFSIKSLLACKTDTDNWKDVDLESLH PVGRREVLVGYDPRGGGQGEGADDAGLIVSLKPIIKGGAFRFIERVRLKGSSYEDQAAAIEAICKKYNVVYLAIDVGGVG SAVAELVRKFYPGLTTLDYSPEMKRMMAYKAREIINAGRLQFDNEWDDLVHSFLMIRQHTTKMSNQITFVSARNKVGSHA DLAWAAMHVLHWEPIDILRDDSTTVSFL >Mature_588_residues MMKMNSPIPPEKPIYTQVQTCALGYYLRQYKTAEIAEALDIAPRTVQQWIAKFGWKQMRDDAPVELMLRQRIAYLLWVDQ KHESQLKELETLLEQKYKRDAAERRRTTPKHSGGYVDEKRGRPSNKVKNDISCITAEMLADFREKTFFAYQKDIHAQKCN DELNEFRFYLKSRQIGLTYYFAFEAFEDAIINGDNQVFLSASRKQSEIFKNYIRKFALEIGDVELKGKDELQLSNGATLY FLSTNARTSQGFNGHVYFDEVFWIPKFGELDDYAGGMSIQSKYRTTYLSTPSTTAHEAYPKWTGDKSLGIDISHKALKKG SLGSDGIFRQIITIDDAIEGGATFFNMDKLRRKYPDKSVFNNLLRCVFLDDASSFFSIKSLLACKTDTDNWKDVDLESLH PVGRREVLVGYDPRGGGQGEGADDAGLIVSLKPIIKGGAFRFIERVRLKGSSYEDQAAAIEAICKKYNVVYLAIDVGGVG SAVAELVRKFYPGLTTLDYSPEMKRMMAYKAREIINAGRLQFDNEWDDLVHSFLMIRQHTTKMSNQITFVSARNKVGSHA DLAWAAMHVLHWEPIDILRDDSTTVSFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67062; Mature: 67062
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKMNSPIPPEKPIYTQVQTCALGYYLRQYKTAEIAEALDIAPRTVQQWIAKFGWKQMRD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCC DAPVELMLRQRIAYLLWVDQKHESQLKELETLLEQKYKRDAAERRRTTPKHSGGYVDEKR CCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GRPSNKVKNDISCITAEMLADFREKTFFAYQKDIHAQKCNDELNEFRFYLKSRQIGLTYY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE FAFEAFEDAIINGDNQVFLSASRKQSEIFKNYIRKFALEIGDVELKGKDELQLSNGATLY EEHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCEEE FLSTNARTSQGFNGHVYFDEVFWIPKFGELDDYAGGMSIQSKYRTTYLSTPSTTAHEAYP EEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHCEEEECCCCCCCHHCCC KWTGDKSLGIDISHKALKKGSLGSDGIFRQIITIDDAIEGGATFFNMDKLRRKYPDKSVF CCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCHHHH NNLLRCVFLDDASSFFSIKSLLACKTDTDNWKDVDLESLHPVGRREVLVGYDPRGGGQGE HHHHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCC GADDAGLIVSLKPIIKGGAFRFIERVRLKGSSYEDQAAAIEAICKKYNVVYLAIDVGGVG CCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCC SAVAELVRKFYPGLTTLDYSPEMKRMMAYKAREIINAGRLQFDNEWDDLVHSFLMIRQHT HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHH TKMSNQITFVSARNKVGSHADLAWAAMHVLHWEPIDILRDDSTTVSFL HHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHEECCCCCEEECC >Mature Secondary Structure MMKMNSPIPPEKPIYTQVQTCALGYYLRQYKTAEIAEALDIAPRTVQQWIAKFGWKQMRD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHCC DAPVELMLRQRIAYLLWVDQKHESQLKELETLLEQKYKRDAAERRRTTPKHSGGYVDEKR CCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GRPSNKVKNDISCITAEMLADFREKTFFAYQKDIHAQKCNDELNEFRFYLKSRQIGLTYY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE FAFEAFEDAIINGDNQVFLSASRKQSEIFKNYIRKFALEIGDVELKGKDELQLSNGATLY EEHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCEEE FLSTNARTSQGFNGHVYFDEVFWIPKFGELDDYAGGMSIQSKYRTTYLSTPSTTAHEAYP EEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHCEEEECCCCCCCHHCCC KWTGDKSLGIDISHKALKKGSLGSDGIFRQIITIDDAIEGGATFFNMDKLRRKYPDKSVF CCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCHHHH NNLLRCVFLDDASSFFSIKSLLACKTDTDNWKDVDLESLHPVGRREVLVGYDPRGGGQGE HHHHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCC GADDAGLIVSLKPIIKGGAFRFIERVRLKGSSYEDQAAAIEAICKKYNVVYLAIDVGGVG CCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCC SAVAELVRKFYPGLTTLDYSPEMKRMMAYKAREIINAGRLQFDNEWDDLVHSFLMIRQHT HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHH TKMSNQITFVSARNKVGSHADLAWAAMHVLHWEPIDILRDDSTTVSFL HHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA