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The map label for this gene is 59712622

Identifier: 59712622

GI number: 59712622

Start: 2249229

End: 2250170

Strand: Direct

Name: 59712622

Synonym: VF_2015

Alternate gene names: NA

Gene position: 2249229-2250170 (Clockwise)

Preceding gene: 59712621

Following gene: 59712644

Centisome position: 77.63

GC content: 38.85

Gene sequence:

>942_bases
ATGACGAGTGATATTCTCAGTTACATGGAAACCGCACTTGTTGATGGGTTATATGAACCACCCATCCCACTTGAAACACT
TGCAAAAGCAACACGCGCAAATGCTATGCACGGTTCTGCATTATATGTAAAAAGTTGCATGGCTTCATATACTGCAAAAT
TATCTCCAATCATCAGTAAGCGTGATTTTAAACGCTTTATTTATGATTACTTGGTGTTTGGGAATGGGTATTTATTGATT
GTGCGAAATGCATTTAATGATGTTGTGAAAATAAAGCATTTACCCGCGCTTTATATGCGAGCACAAGCCACCATTGGACG
GTATACCTATAAACCAAATACTTACAATGACGAGGGACGCATTGATTATAAACAAGGACAGGTTTTTCACTTAAAAGAGT
ACGATATTTGCCAAGAGATATACGGCATGCCGCAATACATTGGCTCTCTAAGTTCAATTTGGCTAAATGAAGATGCTACC
TTGTTTCGCCGCAAGTACTACATCAACGGGGCGCATGCGGGTTATTTGCTTTACATGAATGATCCGAATTTAACCGGCGA
ACAAGAAAAAGAGATTGAAAACAAATTAAAGAAACAAGCAGGGATTGGGGCATTTAAAAATTTATTCATTAACGGTAAGG
GCAAAGATGGAAAACCGCCAGAACTGACACCAATCGGACAAGTTGAAGCCAAGGATGCATTTAAAGATGTGAAAGGTATG
ACGACAAATGACGTACTTGCTAGTCATCGCATTCCACTGGATTTAATGAGCATTGTTCGTGAGGGATTCAGCTCAAGCGG
TGATTTAAATAAAGTGGACCGTATTTTTTATAAGAATGAATTGGTACCGCTTTTAGAATCGGTTTGTGAACTCAATGATT
TTATTGATGCGGATGTGATTTCAATTAATGATTACGTGGCGTTAGATCAGAGCGCTGCATAA

Upstream 100 bases:

>100_bases
TACATTGGGAGCCTATCGACATTTTACGCGATGACTCAACCACCGTTTCATTCTTATAAGAGAGTATATTTTGATAACTT
TTGACGTACCTGAAAGTGTA

Downstream 100 bases:

>100_bases
GTTCAACAAGAGAACGATGCTTTGCTCTGCATTCTTGATATTGAATAATAACCGCTCTTGTCCATTTGGCATGAGCGGTT
TTTTCTATTGTTGCTGGTAA

Product: capsid portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTSDILSYMETALVDGLYEPPIPLETLAKATRANAMHGSALYVKSCMASYTAKLSPIISKRDFKRFIYDYLVFGNGYLLI
VRNAFNDVVKIKHLPALYMRAQATIGRYTYKPNTYNDEGRIDYKQGQVFHLKEYDICQEIYGMPQYIGSLSSIWLNEDAT
LFRRKYYINGAHAGYLLYMNDPNLTGEQEKEIENKLKKQAGIGAFKNLFINGKGKDGKPPELTPIGQVEAKDAFKDVKGM
TTNDVLASHRIPLDLMSIVREGFSSSGDLNKVDRIFYKNELVPLLESVCELNDFIDADVISINDYVALDQSAA

Sequences:

>Translated_313_residues
MTSDILSYMETALVDGLYEPPIPLETLAKATRANAMHGSALYVKSCMASYTAKLSPIISKRDFKRFIYDYLVFGNGYLLI
VRNAFNDVVKIKHLPALYMRAQATIGRYTYKPNTYNDEGRIDYKQGQVFHLKEYDICQEIYGMPQYIGSLSSIWLNEDAT
LFRRKYYINGAHAGYLLYMNDPNLTGEQEKEIENKLKKQAGIGAFKNLFINGKGKDGKPPELTPIGQVEAKDAFKDVKGM
TTNDVLASHRIPLDLMSIVREGFSSSGDLNKVDRIFYKNELVPLLESVCELNDFIDADVISINDYVALDQSAA
>Mature_312_residues
TSDILSYMETALVDGLYEPPIPLETLAKATRANAMHGSALYVKSCMASYTAKLSPIISKRDFKRFIYDYLVFGNGYLLIV
RNAFNDVVKIKHLPALYMRAQATIGRYTYKPNTYNDEGRIDYKQGQVFHLKEYDICQEIYGMPQYIGSLSSIWLNEDATL
FRRKYYINGAHAGYLLYMNDPNLTGEQEKEIENKLKKQAGIGAFKNLFINGKGKDGKPPELTPIGQVEAKDAFKDVKGMT
TNDVLASHRIPLDLMSIVREGFSSSGDLNKVDRIFYKNELVPLLESVCELNDFIDADVISINDYVALDQSAA

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 35316; Mature: 35185

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDILSYMETALVDGLYEPPIPLETLAKATRANAMHGSALYVKSCMASYTAKLSPIISK
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RDFKRFIYDYLVFGNGYLLIVRNAFNDVVKIKHLPALYMRAQATIGRYTYKPNTYNDEGR
HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCHHHHHHHHHHHCCEEECCCCCCCCCC
IDYKQGQVFHLKEYDICQEIYGMPQYIGSLSSIWLNEDATLFRRKYYINGAHAGYLLYMN
EEECCCCEEEEHHHHHHHHHCCCHHHHHHHHHEEECCCHHHHHHEEEECCCCCEEEEEEC
DPNLTGEQEKEIENKLKKQAGIGAFKNLFINGKGKDGKPPELTPIGQVEAKDAFKDVKGM
CCCCCCHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCC
TTNDVLASHRIPLDLMSIVREGFSSSGDLNKVDRIFYKNELVPLLESVCELNDFIDADVI
CHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SINDYVALDQSAA
ECCCEEECCCCCC
>Mature Secondary Structure 
TSDILSYMETALVDGLYEPPIPLETLAKATRANAMHGSALYVKSCMASYTAKLSPIISK
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RDFKRFIYDYLVFGNGYLLIVRNAFNDVVKIKHLPALYMRAQATIGRYTYKPNTYNDEGR
HHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCHHHHHHHHHHHCCEEECCCCCCCCCC
IDYKQGQVFHLKEYDICQEIYGMPQYIGSLSSIWLNEDATLFRRKYYINGAHAGYLLYMN
EEECCCCEEEEHHHHHHHHHCCCHHHHHHHHHEEECCCHHHHHHEEEECCCCCEEEEEEC
DPNLTGEQEKEIENKLKKQAGIGAFKNLFINGKGKDGKPPELTPIGQVEAKDAFKDVKGM
CCCCCCHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCC
TTNDVLASHRIPLDLMSIVREGFSSSGDLNKVDRIFYKNELVPLLESVCELNDFIDADVI
CHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
SINDYVALDQSAA
ECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]