The gene/protein map for NC_006840 is currently unavailable.
Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is yeaD [H]

Identifier: 59711519

GI number: 59711519

Start: 1006420

End: 1007295

Strand: Reverse

Name: yeaD [H]

Synonym: VF_0912

Alternate gene names: 59711519

Gene position: 1007295-1006420 (Counterclockwise)

Preceding gene: 59711520

Following gene: 59711517

Centisome position: 34.76

GC content: 41.55

Gene sequence:

>876_bases
ATGAATCTTACTCAGCTTCCAATTATCAGTGTATTATCTGATAACGTCACTGTTGCTCAATTAGATGATGTAAAAGTGAT
TCGTGTCATTCATGACAAAGCCAATGCAGCCATTTCTCTTCATGGTGGCCATGTTTTATCTTTTACGCCAAAAGGACAAG
ACGATCTTATTTGGATGAGTAAAGAAGCCATCTTTAACCCTGAAAAAGCAATTCGTGGCGGCGTTCCTGTTTGTTGGCCA
TGGTTTGGTCGTATCGCCGATCCTGCTCACGGTTTTGCTCGTAATAATGAGTGGACGCTTATTGAACACCGTGAAAATGA
TAATGGCGTTATTATCGTTCTAGGATTAGAAGCATCTGAAGCAACCAAAGCGATTTGGCCTTTTGAATTTGAAGCACGCT
TAACCGTTGAAATTGGTGATGAGTTACGTATTACGCTTGATGCAAAAAATACGGATAGCAAAGCATGGAATTGTTCTGGT
GCTTTACACACTTACCTTAACGTTGCGGATATTGCTTCAACAACAATTACGGGTATGGGTCCAACATATATTGACGGCCT
TCAAAATGCCAAACTATGTACAGGCGAAGATACTCTATCAATAAGCGCTGCCGTTGACCGTGTATATACTCAACCAGAAA
ATACCGTATCAGTTTCAGACTCTCAGCGTACATTAACGGTGACGAATTCAGGTCATAATGCTGCGGTTATTTGGAACCCT
TGGATTGAAGGCGCGGAATCGATGGCTGATATGAATAATGATGGCTACAAAACCATGGTGTGTGTTGAGTCTACTTACCA
CGCAACTAGCTTAGAAGAAGCCCAAACCGTTGAACCAGGTAATGCATTTACGCTAACCACAACGATTAAAGCGTAA

Upstream 100 bases:

>100_bases
TAATTCAGTATTTATCCTTTTTCTATTCAATCAAAAAGAAACTATTTCTCTGAATATTAAATAGAAGAAGAATGCATATT
TATTATTTTAGGAGTTACCT

Downstream 100 bases:

>100_bases
GATCAAGGTAACCTACTTCGATATTTACCTAAACAAAAACGGAAGCCACTGAGGCTTCCGTTTTTTATTGTTTGGAAAAT
AAAGATTGTCTTTTATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNLTQLPIISVLSDNVTVAQLDDVKVIRVIHDKANAAISLHGGHVLSFTPKGQDDLIWMSKEAIFNPEKAIRGGVPVCWP
WFGRIADPAHGFARNNEWTLIEHRENDNGVIIVLGLEASEATKAIWPFEFEARLTVEIGDELRITLDAKNTDSKAWNCSG
ALHTYLNVADIASTTITGMGPTYIDGLQNAKLCTGEDTLSISAAVDRVYTQPENTVSVSDSQRTLTVTNSGHNAAVIWNP
WIEGAESMADMNNDGYKTMVCVESTYHATSLEEAQTVEPGNAFTLTTTIKA

Sequences:

>Translated_291_residues
MNLTQLPIISVLSDNVTVAQLDDVKVIRVIHDKANAAISLHGGHVLSFTPKGQDDLIWMSKEAIFNPEKAIRGGVPVCWP
WFGRIADPAHGFARNNEWTLIEHRENDNGVIIVLGLEASEATKAIWPFEFEARLTVEIGDELRITLDAKNTDSKAWNCSG
ALHTYLNVADIASTTITGMGPTYIDGLQNAKLCTGEDTLSISAAVDRVYTQPENTVSVSDSQRTLTVTNSGHNAAVIWNP
WIEGAESMADMNNDGYKTMVCVESTYHATSLEEAQTVEPGNAFTLTTTIKA
>Mature_291_residues
MNLTQLPIISVLSDNVTVAQLDDVKVIRVIHDKANAAISLHGGHVLSFTPKGQDDLIWMSKEAIFNPEKAIRGGVPVCWP
WFGRIADPAHGFARNNEWTLIEHRENDNGVIIVLGLEASEATKAIWPFEFEARLTVEIGDELRITLDAKNTDSKAWNCSG
ALHTYLNVADIASTTITGMGPTYIDGLQNAKLCTGEDTLSISAAVDRVYTQPENTVSVSDSQRTLTVTNSGHNAAVIWNP
WIEGAESMADMNNDGYKTMVCVESTYHATSLEEAQTVEPGNAFTLTTTIKA

Specific function: Unknown

COG id: COG0676

COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87081973, Length=267, Percent_Identity=39.3258426966292, Blast_Score=200, Evalue=9e-53,
Organism=Saccharomyces cerevisiae, GI6323746, Length=240, Percent_Identity=30.4166666666667, Blast_Score=106, Evalue=4e-24,
Organism=Drosophila melanogaster, GI19921284, Length=276, Percent_Identity=31.5217391304348, Blast_Score=124, Evalue=7e-29,
Organism=Drosophila melanogaster, GI28574481, Length=173, Percent_Identity=29.4797687861272, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: =5.1.3.15 [H]

Molecular weight: Translated: 31715; Mature: 31715

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTQLPIISVLSDNVTVAQLDDVKVIRVIHDKANAAISLHGGHVLSFTPKGQDDLIWMS
CCCCCCCEEEECCCCEEEEEECCEEEEEEEECCCCEEEEEECCEEEEECCCCCCCEEEEE
KEAIFNPEKAIRGGVPVCWPWFGRIADPAHGFARNNEWTLIEHRENDNGVIIVLGLEASE
HHHHCCCHHHHHCCCCEEEHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCC
ATKAIWPFEFEARLTVEIGDELRITLDAKNTDSKAWNCSGALHTYLNVADIASTTITGMG
CCCEECCEEEEEEEEEEECCEEEEEEECCCCCCCCEECCCCHHHHEEHHHHHHEEECCCC
PTYIDGLQNAKLCTGEDTLSISAAVDRVYTQPENTVSVSDSQRTLTVTNSGHNAAVIWNP
CHHHHCCCCCEEECCCCCEEEHHHHHHHHCCCCCEEEECCCCEEEEEEECCCEEEEEECC
WIEGAESMADMNNDGYKTMVCVESTYHATSLEEAQTVEPGNAFTLTTTIKA
CCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCEEEEEEEECC
>Mature Secondary Structure
MNLTQLPIISVLSDNVTVAQLDDVKVIRVIHDKANAAISLHGGHVLSFTPKGQDDLIWMS
CCCCCCCEEEECCCCEEEEEECCEEEEEEEECCCCEEEEEECCEEEEECCCCCCCEEEEE
KEAIFNPEKAIRGGVPVCWPWFGRIADPAHGFARNNEWTLIEHRENDNGVIIVLGLEASE
HHHHCCCHHHHHCCCCEEEHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCC
ATKAIWPFEFEARLTVEIGDELRITLDAKNTDSKAWNCSGALHTYLNVADIASTTITGMG
CCCEECCEEEEEEEEEEECCEEEEEEECCCCCCCCEECCCCHHHHEEHHHHHHEEECCCC
PTYIDGLQNAKLCTGEDTLSISAAVDRVYTQPENTVSVSDSQRTLTVTNSGHNAAVIWNP
CHHHHCCCCCEEECCCCCEEEHHHHHHHHCCCCCEEEECCCCEEEEEEECCCEEEEEECC
WIEGAESMADMNNDGYKTMVCVESTYHATSLEEAQTVEPGNAFTLTTTIKA
CCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 9298646; 10493123 [H]