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The map label for this gene is yciU [C]

Identifier: 59711517

GI number: 59711517

Start: 1004517

End: 1004840

Strand: Reverse

Name: yciU [C]

Synonym: VF_0910

Alternate gene names: 59711517

Gene position: 1004840-1004517 (Counterclockwise)

Preceding gene: 59711519

Following gene: 59711516

Centisome position: 34.68

GC content: 39.51

Gene sequence:

>324_bases
ATGACTACTGAACTAATTAGCTACGACGACGTAATTGAAGTCGCTTACGATATCTTCCTAGAAATGGCTCAAGACAATCT
TGAACCTGCAGATGTTGCTTTATTCACTTTGCAATTTGATGATCGTGGCGCAGCTGAGGTTGTTGATACCCGTGATGACT
GGGCTGAACACGTTGGATTTGAAGTAGATAAAGAAACATATGCTGAAGTATTAATCGGCTTAGTAAATGAAGAATCTGAT
GCATTAGATGATGTTTTTGCTCGCATGCTAGTTAGCCGTGATCCTGAACATAAATTCTGTCACATGCTATGGAAACGTGA
TTAA

Upstream 100 bases:

>100_bases
CCATCAATAGCAAACGTTTGCTCTTTCTATTTGTTTATACATCTAGCCTTAGGAAGCGATTTCGTGGTAATTTAAAGCGT
ATTTTTTAAGAGTAATAACC

Downstream 100 bases:

>100_bases
GTTAATCCCTACCATATTGTTAAAAAGGAGCATTCATTTGCTCCTTTTTTATTTCTGAATTTATTGAATCTAGCTCTTCG
CATCCCCATTATTTCTTTAT

Product: dsDNA-mimic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTTELISYDDVIEVAYDIFLEMAQDNLEPADVALFTLQFDDRGAAEVVDTRDDWAEHVGFEVDKETYAEVLIGLVNEESD
ALDDVFARMLVSRDPEHKFCHMLWKRD

Sequences:

>Translated_107_residues
MTTELISYDDVIEVAYDIFLEMAQDNLEPADVALFTLQFDDRGAAEVVDTRDDWAEHVGFEVDKETYAEVLIGLVNEESD
ALDDVFARMLVSRDPEHKFCHMLWKRD
>Mature_106_residues
TTELISYDDVIEVAYDIFLEMAQDNLEPADVALFTLQFDDRGAAEVVDTRDDWAEHVGFEVDKETYAEVLIGLVNEESDA
LDDVFARMLVSRDPEHKFCHMLWKRD

Specific function: Unknown

COG id: COG3099

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0263 family [H]

Homologues:

Organism=Escherichia coli, GI87081860, Length=100, Percent_Identity=52, Blast_Score=119, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007376
- ProDom:   PD020447 [H]

Pfam domain/function: PF04269 DUF440 [H]

EC number: NA

Molecular weight: Translated: 12361; Mature: 12230

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTELISYDDVIEVAYDIFLEMAQDNLEPADVALFTLQFDDRGAAEVVDTRDDWAEHVGF
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHCCHHHHHHHCCC
EVDKETYAEVLIGLVNEESDALDDVFARMLVSRDPEHKFCHMLWKRD
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TTELISYDDVIEVAYDIFLEMAQDNLEPADVALFTLQFDDRGAAEVVDTRDDWAEHVGF
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHCCHHHHHHHCCC
EVDKETYAEVLIGLVNEESDALDDVFARMLVSRDPEHKFCHMLWKRD
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]