| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711502
Identifier: 59711502
GI number: 59711502
Start: 984703
End: 985626
Strand: Reverse
Name: 59711502
Synonym: VF_0895
Alternate gene names: NA
Gene position: 985626-984703 (Counterclockwise)
Preceding gene: 59711504
Following gene: 59711501
Centisome position: 34.02
GC content: 37.66
Gene sequence:
>924_bases ATGAATCATTTATCATTTTTTTGGTTAACTCATGACAAAGAGAAAGCTCTGAATGCATTGAGGACTGAGTTTAGCCAACA AGTTACCTCTAACATCACATCGGGGAAAATTCAGCTTCCACCGATCCCTGATGTCGTTCTTAAAATTCAGAAATTGTGTA CCCTTGAAGGTACAATGATAAAAGATGTGTCCGATACGCTTTTAGAAGACCCGAGCCTTACCGCTATTGTGATTCGAATG GCTAATTCTGTCGTATTTAACCACCGTAATATTACCTGTACAGATGTTCTTACTGCTGTATCTCGTCTAGGTATCTTCCG TGTGCGTGATATTGTTACCGCACAAGCTATCGAACAATTAAAATATTCAAGTGACTTAAATAGCGAGTGTAACGCGTTAC TTCGTAAGAGTGCGGCTAAGTCGCGCGAATTTGCCGCCGTTATGACAATGGTATGCGAAGAGATACTAAAAGAAAGTACT GATAGCTCACACGATTACCTTGAACCAGAAAAGGCGCTATTAAGTGGTCTTTTGGCAGACATCGGTTTATTTTGCTTAGT CAATAAATACTACAACTACCTTGAAGAAGGAAATTACCTCGATCTCGATGTTGCACTCCATATTTTTGAAAAAGAGTGTA ATCCAATTAGCTACCATGTATTGAATCATTGGCAGTTTGATGAAGATTTCCTTTCAATTGCCACAAATAAACAAATTTCA GAAAATAGCTACCCAATAAGTTATTTAAACATCGCACGTATTGCTAATCATTTGTTAATGTTCAGAAATAACGATGACGA TATTGATGACCATGAAGTAGAAATCACACTAGAAGGTGCTGAAGCCCTTTATACACTAAGTAACCTTACCAATACTCAAT TCAACGACCGAATTAGAGAAACACTAAGAAGCAGTGGTTTGTAA
Upstream 100 bases:
>100_bases TATTTTTTTAATTTGAGTGTGTGCTCAAATCTTTAAGTTTTTATTTCGTACGTATAAAAATAATGTATGATTTACTCATT ATTTAAATACATGAATTAAA
Downstream 100 bases:
>100_bases TTAAATTACAACAAATTGATTAACATTATATTGCCGAATTTGAAAAGCCTTGATATTCTCGGGGCTTCTTCAAAAGTTGG GCTTATTATTATGTTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Metal Dependent Phosphohydrolase; Metal-Dependent Hydrolase HDOD; Hdod Domain Family Protein
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MNHLSFFWLTHDKEKALNALRTEFSQQVTSNITSGKIQLPPIPDVVLKIQKLCTLEGTMIKDVSDTLLEDPSLTAIVIRM ANSVVFNHRNITCTDVLTAVSRLGIFRVRDIVTAQAIEQLKYSSDLNSECNALLRKSAAKSREFAAVMTMVCEEILKEST DSSHDYLEPEKALLSGLLADIGLFCLVNKYYNYLEEGNYLDLDVALHIFEKECNPISYHVLNHWQFDEDFLSIATNKQIS ENSYPISYLNIARIANHLLMFRNNDDDIDDHEVEITLEGAEALYTLSNLTNTQFNDRIRETLRSSGL
Sequences:
>Translated_307_residues MNHLSFFWLTHDKEKALNALRTEFSQQVTSNITSGKIQLPPIPDVVLKIQKLCTLEGTMIKDVSDTLLEDPSLTAIVIRM ANSVVFNHRNITCTDVLTAVSRLGIFRVRDIVTAQAIEQLKYSSDLNSECNALLRKSAAKSREFAAVMTMVCEEILKEST DSSHDYLEPEKALLSGLLADIGLFCLVNKYYNYLEEGNYLDLDVALHIFEKECNPISYHVLNHWQFDEDFLSIATNKQIS ENSYPISYLNIARIANHLLMFRNNDDDIDDHEVEITLEGAEALYTLSNLTNTQFNDRIRETLRSSGL >Mature_307_residues MNHLSFFWLTHDKEKALNALRTEFSQQVTSNITSGKIQLPPIPDVVLKIQKLCTLEGTMIKDVSDTLLEDPSLTAIVIRM ANSVVFNHRNITCTDVLTAVSRLGIFRVRDIVTAQAIEQLKYSSDLNSECNALLRKSAAKSREFAAVMTMVCEEILKEST DSSHDYLEPEKALLSGLLADIGLFCLVNKYYNYLEEGNYLDLDVALHIFEKECNPISYHVLNHWQFDEDFLSIATNKQIS ENSYPISYLNIARIANHLLMFRNNDDDIDDHEVEITLEGAEALYTLSNLTNTQFNDRIRETLRSSGL
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34875; Mature: 34875
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHLSFFWLTHDKEKALNALRTEFSQQVTSNITSGKIQLPPIPDVVLKIQKLCTLEGTMI CCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHH KDVSDTLLEDPSLTAIVIRMANSVVFNHRNITCTDVLTAVSRLGIFRVRDIVTAQAIEQL HHHHHHHHCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYSSDLNSECNALLRKSAAKSREFAAVMTMVCEEILKESTDSSHDYLEPEKALLSGLLAD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH IGLFCLVNKYYNYLEEGNYLDLDVALHIFEKECNPISYHVLNHWQFDEDFLSIATNKQIS HHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHCCCCCC ENSYPISYLNIARIANHLLMFRNNDDDIDDHEVEITLEGAEALYTLSNLTNTQFNDRIRE CCCCCCHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHH TLRSSGL HHHHCCC >Mature Secondary Structure MNHLSFFWLTHDKEKALNALRTEFSQQVTSNITSGKIQLPPIPDVVLKIQKLCTLEGTMI CCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHH KDVSDTLLEDPSLTAIVIRMANSVVFNHRNITCTDVLTAVSRLGIFRVRDIVTAQAIEQL HHHHHHHHCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYSSDLNSECNALLRKSAAKSREFAAVMTMVCEEILKESTDSSHDYLEPEKALLSGLLAD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH IGLFCLVNKYYNYLEEGNYLDLDVALHIFEKECNPISYHVLNHWQFDEDFLSIATNKQIS HHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHCCCCCC ENSYPISYLNIARIANHLLMFRNNDDDIDDHEVEITLEGAEALYTLSNLTNTQFNDRIRE CCCCCCHHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHH TLRSSGL HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA