| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711504
Identifier: 59711504
GI number: 59711504
Start: 986721
End: 987269
Strand: Reverse
Name: 59711504
Synonym: VF_0897
Alternate gene names: NA
Gene position: 987269-986721 (Counterclockwise)
Preceding gene: 59711507
Following gene: 59711502
Centisome position: 34.07
GC content: 43.35
Gene sequence:
>549_bases ATGATCCGTAAAACACTTTTAGCATCAAGCCTAATGTTTATTTCTGCAACTTCAATGGCTGCAGATGACGCAAACAATGC CATCATGAGCAACTTCAGCTACGATTACGTTGAAGCTCGCATTGGCTTTAGCCCTTCAACATTCGGTGCTGGTTTCAGCA AATCAATTCACCCAAATGCTCACGCTATCGCAAGCATTGATTCAGAGCTAGACGGCGATTACGACCTAGCTGCTGGTCTT GGTTTCCACGCTCCAGTAAACAACTGGGCTGACATCACAGGTGAAATGTTATTACGTGTTGTTGATGACAACCATAAATA CCACAATGACACAGGTATGGAACTGAATCTTGGCGTACGTCAATGGTTAGGTCCACAACTTGAAGTTGGTGGTAAAGTAG GTTACCTATCTATCGATGATAACGACGATACTCTATTCTCAGTATACGGTCGCTTCCACTCAACAGAGCTATTCTCTATT GGTGCTGAAGGTCGCTTCAATGGTATCTACGGTGATCAGCTTCTGCTAACAGCTCGTTTTAAATACTAA
Upstream 100 bases:
>100_bases TCAAATTTATATATTGCTTTCTAGCAAAAATACCGATTTCTGTTAGTATCTAGGCCATATTTTTTGTTTACAGCACTCAA TTTGATAGGTTTCAAATATC
Downstream 100 bases:
>100_bases TTTAAATTAGATATTTAAATACAAAAAAACCTCGTTATCCCTTAACTTTATTTGTTTCGGTATAACGAGGTTTTTTTATG AAATAAACAATTTAAACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MIRKTLLASSLMFISATSMAADDANNAIMSNFSYDYVEARIGFSPSTFGAGFSKSIHPNAHAIASIDSELDGDYDLAAGL GFHAPVNNWADITGEMLLRVVDDNHKYHNDTGMELNLGVRQWLGPQLEVGGKVGYLSIDDNDDTLFSVYGRFHSTELFSI GAEGRFNGIYGDQLLLTARFKY
Sequences:
>Translated_182_residues MIRKTLLASSLMFISATSMAADDANNAIMSNFSYDYVEARIGFSPSTFGAGFSKSIHPNAHAIASIDSELDGDYDLAAGL GFHAPVNNWADITGEMLLRVVDDNHKYHNDTGMELNLGVRQWLGPQLEVGGKVGYLSIDDNDDTLFSVYGRFHSTELFSI GAEGRFNGIYGDQLLLTARFKY >Mature_182_residues MIRKTLLASSLMFISATSMAADDANNAIMSNFSYDYVEARIGFSPSTFGAGFSKSIHPNAHAIASIDSELDGDYDLAAGL GFHAPVNNWADITGEMLLRVVDDNHKYHNDTGMELNLGVRQWLGPQLEVGGKVGYLSIDDNDDTLFSVYGRFHSTELFSI GAEGRFNGIYGDQLLLTARFKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19944; Mature: 19944
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKTLLASSLMFISATSMAADDANNAIMSNFSYDYVEARIGFSPSTFGAGFSKSIHPNA CCCHHHHHHHHHEEEECHHCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC HAIASIDSELDGDYDLAAGLGFHAPVNNWADITGEMLLRVVDDNHKYHNDTGMELNLGVR EEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCCCCCEEECCHH QWLGPQLEVGGKVGYLSIDDNDDTLFSVYGRFHSTELFSIGAEGRFNGIYGDQLLLTARF HHCCCCEECCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCEECCEECCEEEEEEEE KY CC >Mature Secondary Structure MIRKTLLASSLMFISATSMAADDANNAIMSNFSYDYVEARIGFSPSTFGAGFSKSIHPNA CCCHHHHHHHHHEEEECHHCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC HAIASIDSELDGDYDLAAGLGFHAPVNNWADITGEMLLRVVDDNHKYHNDTGMELNLGVR EEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCCCCCEEECCHH QWLGPQLEVGGKVGYLSIDDNDDTLFSVYGRFHSTELFSIGAEGRFNGIYGDQLLLTARF HHCCCCEECCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCEECCEECCEEEEEEEE KY CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA