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The map label for this gene is ybjT [H]

Identifier: 59711490

GI number: 59711490

Start: 968574

End: 970016

Strand: Reverse

Name: ybjT [H]

Synonym: VF_0883

Alternate gene names: 59711490

Gene position: 970016-968574 (Counterclockwise)

Preceding gene: 59711496

Following gene: 59711484

Centisome position: 33.48

GC content: 41.37

Gene sequence:

>1443_bases
ATGGCTCATAGAATAATTATTGTTGGTGCATCAGGGTACATAGGCTCGCAGTTAATTCCATTGTTATTAGAGCAAGGGCA
TCAGGTTATTGCTTGTGCCCGAAATATCCAGTATTTAACCGATAGAGTTCAACAACACCCTAACTTGCGCTGTGAATACC
TTGATTTAGAAAATAAAACAACAATCGAACCACTCTTGTTTGATTGTGATATTGGTTATTTTTTAGTACATGGGATGTCA
CACGGTCACGATTTTATAGATTATGAAGTCTCCTTAGCTCAAAATTTTGCAGATGCCGCTGAACAATCCCAACTGAAACG
GATTATCTATTTAAGTGCATTACAACCAGAGAATCATCAGTCACAGCATTTACTGGCTCGACAAAAAACTGGGGAGATTC
TTCGTTCTACCGGCATCACCACCATTGAAATTCAATCGGGCATTATTATCGGTGCAGGCTCTGCTGCCCTCGAGATCATG
ACAGATTTTATCAATCACTTAGCCATCATTCTCTGTCCTAAATGGATTCATTCTCAAGCCAATCCTATCGCCATTGATAA
TCTAAATGATTACCTCATTCAATGCCTTGATATCGAGGTTAGTAACTCGCTTTCCTTAGAAGCTGGAGGGCCAGATACCG
TTACCTACCTTCAGCTCTTTAACCTTCTGGCTAAACGACTAAATAAATCCATCAAAATTATTCCAACTCGTTTTATTTCA
CCTAAATTTGCAGGTTTATGGCTTGGAATTATTACCTCGGTTCCATCTGAGTTAGGACGTGCACTTCTCGCAGGGATAGA
TCATGATTTGCTTGCAGATAATTCAAAAATACAGCAGCTCATGCCCCAAACACTCACCCCACTTCCTGAAGCATTGAAAT
TGGCTAATCATACTTCGGCCAATAGTCTACAAGGTGAAATATGGGGATTCGACCCAAGTGCACTGCGTCGTTGGCAACCC
GATTACGGTTACTACCCTAAACAAGCCGGAGCCAGTTTTACAACCAACGCATCGGCTAATTCACTGTGGAAAGTAATATT
GCAACTTGGTGGGCCTGAAGGCTACTTTTTTGCCAATGGGTTATGGCGAACCAGAGAGTGGCTTGATCCACTGCTTGGCG
GCTCTTTTCCTATACGAAGAAAACCAAAATCAGATCAGCTGCAACTGGGTGACTACATTGATTCTTGGAAAGTGATCCGT
TGTGAAAACAACGAATTTTTATCTCTATTATTTGGAATGACCGCTCCGGGGTTAGGACGACTCGAATTTTCAATAAAAGA
GCTTGAAAACAACACCAGAGAGTTAGATGTCCGTGCTTGGTGGCACCCAAAAGGCTTTTGGGGATTAATGTATTGGTTTG
CGATGTTTCCCGCACACCTTTTTATCTTCAAAGGCATGGTAAAAGCGATATGTAAAAAAGCTGAGAAAGAAGAAAAAGGA
TAA

Upstream 100 bases:

>100_bases
ATACAAAAGTGTCTATTTAATCAAGTATATGTTCATAAATTATACTAGAATCAAATAGTATTAATAAAAAAGCACTTAGG
AAAAGGATGGATTCTTACAA

Downstream 100 bases:

>100_bases
GAGGAATAAGGATAGGAAGAATAAAAAATGGGCTCTACTAAGAGCCCATCCAATCTCGATAATCGATTATTTTTTCACGT
TAAATGAAAATGGGATTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MAHRIIIVGASGYIGSQLIPLLLEQGHQVIACARNIQYLTDRVQQHPNLRCEYLDLENKTTIEPLLFDCDIGYFLVHGMS
HGHDFIDYEVSLAQNFADAAEQSQLKRIIYLSALQPENHQSQHLLARQKTGEILRSTGITTIEIQSGIIIGAGSAALEIM
TDFINHLAIILCPKWIHSQANPIAIDNLNDYLIQCLDIEVSNSLSLEAGGPDTVTYLQLFNLLAKRLNKSIKIIPTRFIS
PKFAGLWLGIITSVPSELGRALLAGIDHDLLADNSKIQQLMPQTLTPLPEALKLANHTSANSLQGEIWGFDPSALRRWQP
DYGYYPKQAGASFTTNASANSLWKVILQLGGPEGYFFANGLWRTREWLDPLLGGSFPIRRKPKSDQLQLGDYIDSWKVIR
CENNEFLSLLFGMTAPGLGRLEFSIKELENNTRELDVRAWWHPKGFWGLMYWFAMFPAHLFIFKGMVKAICKKAEKEEKG

Sequences:

>Translated_480_residues
MAHRIIIVGASGYIGSQLIPLLLEQGHQVIACARNIQYLTDRVQQHPNLRCEYLDLENKTTIEPLLFDCDIGYFLVHGMS
HGHDFIDYEVSLAQNFADAAEQSQLKRIIYLSALQPENHQSQHLLARQKTGEILRSTGITTIEIQSGIIIGAGSAALEIM
TDFINHLAIILCPKWIHSQANPIAIDNLNDYLIQCLDIEVSNSLSLEAGGPDTVTYLQLFNLLAKRLNKSIKIIPTRFIS
PKFAGLWLGIITSVPSELGRALLAGIDHDLLADNSKIQQLMPQTLTPLPEALKLANHTSANSLQGEIWGFDPSALRRWQP
DYGYYPKQAGASFTTNASANSLWKVILQLGGPEGYFFANGLWRTREWLDPLLGGSFPIRRKPKSDQLQLGDYIDSWKVIR
CENNEFLSLLFGMTAPGLGRLEFSIKELENNTRELDVRAWWHPKGFWGLMYWFAMFPAHLFIFKGMVKAICKKAEKEEKG
>Mature_479_residues
AHRIIIVGASGYIGSQLIPLLLEQGHQVIACARNIQYLTDRVQQHPNLRCEYLDLENKTTIEPLLFDCDIGYFLVHGMSH
GHDFIDYEVSLAQNFADAAEQSQLKRIIYLSALQPENHQSQHLLARQKTGEILRSTGITTIEIQSGIIIGAGSAALEIMT
DFINHLAIILCPKWIHSQANPIAIDNLNDYLIQCLDIEVSNSLSLEAGGPDTVTYLQLFNLLAKRLNKSIKIIPTRFISP
KFAGLWLGIITSVPSELGRALLAGIDHDLLADNSKIQQLMPQTLTPLPEALKLANHTSANSLQGEIWGFDPSALRRWQPD
YGYYPKQAGASFTTNASANSLWKVILQLGGPEGYFFANGLWRTREWLDPLLGGSFPIRRKPKSDQLQLGDYIDSWKVIRC
ENNEFLSLLFGMTAPGLGRLEFSIKELENNTRELDVRAWWHPKGFWGLMYWFAMFPAHLFIFKGMVKAICKKAEKEEKG

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=481, Percent_Identity=44.2827442827443, Blast_Score=407, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53972; Mature: 53841

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRIIIVGASGYIGSQLIPLLLEQGHQVIACARNIQYLTDRVQQHPNLRCEYLDLENKT
CCCEEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
TIEPLLFDCDIGYFLVHGMSHGHDFIDYEVSLAQNFADAAEQSQLKRIIYLSALQPENHQ
CCCCEEEECCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
SQHLLARQKTGEILRSTGITTIEIQSGIIIGAGSAALEIMTDFINHLAIILCPKWIHSQA
HHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHCCCHHHCCCC
NPIAIDNLNDYLIQCLDIEVSNSLSLEAGGPDTVTYLQLFNLLAKRLNKSIKIIPTRFIS
CCEEECCCHHHHHEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
PKFAGLWLGIITSVPSELGRALLAGIDHDLLADNSKIQQLMPQTLTPLPEALKLANHTSA
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCC
NSLQGEIWGFDPSALRRWQPDYGYYPKQAGASFTTNASANSLWKVILQLGGPEGYFFANG
CCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEEECC
LWRTREWLDPLLGGSFPIRRKPKSDQLQLGDYIDSWKVIRCENNEFLSLLFGMTAPGLGR
CHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCHHHHHHHHCCCCCCCC
LEFSIKELENNTRELDVRAWWHPKGFWGLMYWFAMFPAHLFIFKGMVKAICKKAEKEEKG
HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AHRIIIVGASGYIGSQLIPLLLEQGHQVIACARNIQYLTDRVQQHPNLRCEYLDLENKT
CCEEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
TIEPLLFDCDIGYFLVHGMSHGHDFIDYEVSLAQNFADAAEQSQLKRIIYLSALQPENHQ
CCCCEEEECCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
SQHLLARQKTGEILRSTGITTIEIQSGIIIGAGSAALEIMTDFINHLAIILCPKWIHSQA
HHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHCCCHHHCCCC
NPIAIDNLNDYLIQCLDIEVSNSLSLEAGGPDTVTYLQLFNLLAKRLNKSIKIIPTRFIS
CCEEECCCHHHHHEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
PKFAGLWLGIITSVPSELGRALLAGIDHDLLADNSKIQQLMPQTLTPLPEALKLANHTSA
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCC
NSLQGEIWGFDPSALRRWQPDYGYYPKQAGASFTTNASANSLWKVILQLGGPEGYFFANG
CCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEEEECC
LWRTREWLDPLLGGSFPIRRKPKSDQLQLGDYIDSWKVIRCENNEFLSLLFGMTAPGLGR
CHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCHHHHHHHHCCCCCCCC
LEFSIKELENNTRELDVRAWWHPKGFWGLMYWFAMFPAHLFIFKGMVKAICKKAEKEEKG
HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]