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The map label for this gene is ybjL [C]

Identifier: 59711496

GI number: 59711496

Start: 977863

End: 979545

Strand: Reverse

Name: ybjL [C]

Synonym: VF_0889

Alternate gene names: 59711496

Gene position: 979545-977863 (Counterclockwise)

Preceding gene: 59711497

Following gene: 59711490

Centisome position: 33.81

GC content: 40.76

Gene sequence:

>1683_bases
GTGAACATTGATGTTGCGACATTGTTATCGCAAAACGATATCTTACTTTTATTCGTTGTTCTCGCTCTTGGCTTATTCAT
AGCTAAACTTAGGATTGGTAGTTTTCAACTAGGCAGTTCTATTGGTGTTCTTATCACCGCCCTCTTTATGGGAAGTCTTG
GTTATACTTTTACCGCTGACTCTCTCAATATTGGCTTTATGCTATTTATCTTTTGTGTTGGTATCGAGGCTGGACCAAAC
TTCTTTGGTATCTTCCTACGAGATGGCAAACACTACCTTTTACTTGTACTTGTTGTATTAGTCTCAGCTGTTTCACTCAG
TTTTTTAACAGGCCACTACTTCGGTTTAGACTACGGTTTATCTACAGGTATGATGGCAGGTGCATTAACAGCAACGCCTG
TATTAGTAGGTGCAAAAGATGCATTAAATTCTGGTTTAGCAGCCCTGCCTGAAGGTGTCGACTTTAGTAAGGTAATTGAC
AATTTAAGTGTCGGTTATGCTTTCTCATATTTAATCGGTTTAACAAGCCTTATCCTTTTGGCTCGTTTACTTCCGAAATT
GCAAAAACAGAATCTACAAGACAGTGCAATGCAAATTGCTCAAGAACGTGGAATAGGAAGTGCTGGCCAGAGAAAAGTAT
ACCTACCAATCATTCGAGCTTATCGTGTTGGCCAAGAGCTAATCGATTGGACTGATGGTAAAAACTTACGTGAGCTAGGT
ATTCACCGCCAAACAGGCTGTCACATTGAACGTATCCGTCGTAACGGTATTTTAGCAAACCCCGATGGTGACTACATTTT
GCAACAAGGTGATGAAATTGCACTTGTAGGTTATCCAGATAGCCATGCTCGTCTCGATTCAAGCTTTAGAAACGGGAAAG
AAGTATTTGACCGTAACTTATTAGATTTACGCATTGCAGAAGAAGAGATCGTAGTTAAAAGCGATAATATCGCTGGTAAA
CGCCTGTCAGAATTAAACCTTTCTGAATACGGCTGTTTCCTTAACCGTGTGGTTCGTGCACAAATTGAAATGCCAATTGA
ACACGATATCGTATTAGCGAAAGGTGACATTCTTCAAGTGAGTGGTGAAAAAAGCAAAGTTCACTACCTAGCTGACAAGA
TTGGATTTATCTCTATTCATAGCCAAGTATCTGATTTATTAGCTTTCTGTAGCTTCTTTATCCTTGGCATCATGTTCGGG
ATGATCACCATGAGCTTTGGCCAAGTGACATTTGGTTTAGGTAATGCCGTTGGTCTATTGATTTCAGGTATCACATTAGG
TTTCTTAAGAGCAAACCACCCTACTTTTGGTTATGTACCACAAGGGGCTCTAAACATGACCAAAAACCTTGGTTTATTAG
TGTTCATGGTGGGGATTGGATTAAGTGCTGGTGGCAATATTAATGAATACTTCTCTGAAGATGGTTTAAAAGTACTTGCT
GCTGCATTTATTGTCAGCGTGATCCCAGTAATTTTAGCCTACCTTGTTGGTGCCTATATTCTTAATATGAACCGTGCTTT
ATTGATTGGTGCAATTATCGGTGCTCGTACTTGTGGCCCAGCAATGGACGTGGTTAACGAACACGCACGCAGCACCATCC
CTGCACTGGGTTACGCAGGTACGTATGCGATTGCCAATATCTTAATGACCGTTGCCGGCACCATTATGATACTCCTAGCA
TAA

Upstream 100 bases:

>100_bases
GATTTTTTTTTGATTTTATTTCTAAATATGGTTATACATTCGCCATTTTTAAGTTAGACTTACGTCACACTTTCTTACTC
CATATTTCAGGCAAAATACA

Downstream 100 bases:

>100_bases
TACGAACCCATTTATTGGAACCAATAAAAAACCCCAGAATGAACATTCACTCTGGGGTTTTCTTTTCTCTTTTGTTTACT
GATTATACCATTCTGGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MNIDVATLLSQNDILLLFVVLALGLFIAKLRIGSFQLGSSIGVLITALFMGSLGYTFTADSLNIGFMLFIFCVGIEAGPN
FFGIFLRDGKHYLLLVLVVLVSAVSLSFLTGHYFGLDYGLSTGMMAGALTATPVLVGAKDALNSGLAALPEGVDFSKVID
NLSVGYAFSYLIGLTSLILLARLLPKLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNLLDLRIAEEEIVVKSDNIAGK
RLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQVSGEKSKVHYLADKIGFISIHSQVSDLLAFCSFFILGIMFG
MITMSFGQVTFGLGNAVGLLISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNINEYFSEDGLKVLA
AAFIVSVIPVILAYLVGAYILNMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAGTYAIANILMTVAGTIMILLA

Sequences:

>Translated_560_residues
MNIDVATLLSQNDILLLFVVLALGLFIAKLRIGSFQLGSSIGVLITALFMGSLGYTFTADSLNIGFMLFIFCVGIEAGPN
FFGIFLRDGKHYLLLVLVVLVSAVSLSFLTGHYFGLDYGLSTGMMAGALTATPVLVGAKDALNSGLAALPEGVDFSKVID
NLSVGYAFSYLIGLTSLILLARLLPKLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNLLDLRIAEEEIVVKSDNIAGK
RLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQVSGEKSKVHYLADKIGFISIHSQVSDLLAFCSFFILGIMFG
MITMSFGQVTFGLGNAVGLLISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNINEYFSEDGLKVLA
AAFIVSVIPVILAYLVGAYILNMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAGTYAIANILMTVAGTIMILLA
>Mature_560_residues
MNIDVATLLSQNDILLLFVVLALGLFIAKLRIGSFQLGSSIGVLITALFMGSLGYTFTADSLNIGFMLFIFCVGIEAGPN
FFGIFLRDGKHYLLLVLVVLVSAVSLSFLTGHYFGLDYGLSTGMMAGALTATPVLVGAKDALNSGLAALPEGVDFSKVID
NLSVGYAFSYLIGLTSLILLARLLPKLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNLLDLRIAEEEIVVKSDNIAGK
RLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQVSGEKSKVHYLADKIGFISIHSQVSDLLAFCSFFILGIMFG
MITMSFGQVTFGLGNAVGLLISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNINEYFSEDGLKVLA
AAFIVSVIPVILAYLVGAYILNMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAGTYAIANILMTVAGTIMILLA

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1787071, Length=560, Percent_Identity=65.1785714285714, Blast_Score=757, Evalue=0.0,
Organism=Escherichia coli, GI87082315, Length=570, Percent_Identity=27.0175438596491, Blast_Score=153, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR023017
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 60315; Mature: 60315

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDVATLLSQNDILLLFVVLALGLFIAKLRIGSFQLGSSIGVLITALFMGSLGYTFTAD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCEEEEC
SLNIGFMLFIFCVGIEAGPNFFGIFLRDGKHYLLLVLVVLVSAVSLSFLTGHYFGLDYGL
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
STGMMAGALTATPVLVGAKDALNSGLAALPEGVDFSKVIDNLSVGYAFSYLIGLTSLILL
CHHHHHHHHHHCCEEEECHHHHCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
ARLLPKLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHC
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNL
CCCCCCHHHHHHHHCCEEECCCCCCCEECCCEEEEEECCCHHHHHHHHHCCCHHHHCCCC
LDLRIAEEEIVVKSDNIAGKRLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQV
CEEEECCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEE
SGEKSKVHYLADKIGFISIHSQVSDLLAFCSFFILGIMFGMITMSFGQVTFGLGNAVGLL
CCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNINEYFSEDGLKVLA
HHHHHHHHEECCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHCCHHHHHH
AAFIVSVIPVILAYLVGAYILNMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHH
TYAIANILMTVAGTIMILLA
HHHHHHHHHHHHHHHHEEEC
>Mature Secondary Structure
MNIDVATLLSQNDILLLFVVLALGLFIAKLRIGSFQLGSSIGVLITALFMGSLGYTFTAD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCEEEEC
SLNIGFMLFIFCVGIEAGPNFFGIFLRDGKHYLLLVLVVLVSAVSLSFLTGHYFGLDYGL
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
STGMMAGALTATPVLVGAKDALNSGLAALPEGVDFSKVIDNLSVGYAFSYLIGLTSLILL
CHHHHHHHHHHCCEEEECHHHHCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
ARLLPKLQKQNLQDSAMQIAQERGIGSAGQRKVYLPIIRAYRVGQELIDWTDGKNLRELG
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHC
IHRQTGCHIERIRRNGILANPDGDYILQQGDEIALVGYPDSHARLDSSFRNGKEVFDRNL
CCCCCCHHHHHHHHCCEEECCCCCCCEECCCEEEEEECCCHHHHHHHHHCCCHHHHCCCC
LDLRIAEEEIVVKSDNIAGKRLSELNLSEYGCFLNRVVRAQIEMPIEHDIVLAKGDILQV
CEEEECCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEE
SGEKSKVHYLADKIGFISIHSQVSDLLAFCSFFILGIMFGMITMSFGQVTFGLGNAVGLL
CCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ISGITLGFLRANHPTFGYVPQGALNMTKNLGLLVFMVGIGLSAGGNINEYFSEDGLKVLA
HHHHHHHHEECCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHCCHHHHHH
AAFIVSVIPVILAYLVGAYILNMNRALLIGAIIGARTCGPAMDVVNEHARSTIPALGYAG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHH
TYAIANILMTVAGTIMILLA
HHHHHHHHHHHHHHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA