| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is ureG
Identifier: 59711277
GI number: 59711277
Start: 733918
End: 734538
Strand: Reverse
Name: ureG
Synonym: VF_0670
Alternate gene names: 59711277
Gene position: 734538-733918 (Counterclockwise)
Preceding gene: 59711278
Following gene: 59711272
Centisome position: 25.35
GC content: 43.96
Gene sequence:
>621_bases ATGCAAGATTACAAACAACCGTTACGTATTGGTGTTGGTGGCCCTGTTGGTTCAGGTAAAACAGCACTATTAGAAGTACT GTGTAAAACACTGCGCGATACATACCAAATCGCTGTAGTAACCAACGATATCTACACGCAAGAAGATGCCAAGATCCTAA CTCAAGCTGAAGCGTTAGCAGCAGATCGCATCATTGGTGTAGAAACCGGTGGCTGTCCTCACACTGCCATTCGTGAAGAT GCATCAATGAACTTAGCTGCTGTTGAAGAGTTAGCACAGCGCCATAAAAACTTAGATGTTGTTTTTGTAGAAAGTGGCGG CGACAACCTAAGTGCAACCTTCAGCCCTGAACTAGCGGACTTAACCATCTATGTGATTGATGTTGCTGAAGGTGAAAAGA TCCCTCGTAAAGGTGGCCCTGGTATCACAAAATCGGATTTATTGATCATTAATAAAATCGACTTAGCACCGTATGTTGGC GCTTCTCTTGAAGTAATGGAATCTGACACGGCACGTATGCGTCCAACCCGTCCATACGTGTTTACAAACCTGAAAGAAGG CGTTGGTTTAGATAAAATCATCGAGTTCATCGTTGATCGCGGCATGCTAGACGCAAAATAA
Upstream 100 bases:
>100_bases GCCTGAACACTTGATAGGTAGCTTCACCCCAGCGCAAGTATTGGCAAGCTCTCGACACGAGAGCCAATACACTCGACTAT TTAGATCGTGAGAAAATAAA
Downstream 100 bases:
>100_bases TGACGCTAAACAAATTGCGATAAACAAGCATCAATATAAACCTTCCTAAAATAAGACAAAGCCCTGATACTACTTATGCC ATAACTAAGTACGTATCAGG
Product: urease accessory protein UreG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MQDYKQPLRIGVGGPVGSGKTALLEVLCKTLRDTYQIAVVTNDIYTQEDAKILTQAEALAADRIIGVETGGCPHTAIRED ASMNLAAVEELAQRHKNLDVVFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPRKGGPGITKSDLLIINKIDLAPYVG ASLEVMESDTARMRPTRPYVFTNLKEGVGLDKIIEFIVDRGMLDAK
Sequences:
>Translated_206_residues MQDYKQPLRIGVGGPVGSGKTALLEVLCKTLRDTYQIAVVTNDIYTQEDAKILTQAEALAADRIIGVETGGCPHTAIRED ASMNLAAVEELAQRHKNLDVVFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPRKGGPGITKSDLLIINKIDLAPYVG ASLEVMESDTARMRPTRPYVFTNLKEGVGLDKIIEFIVDRGMLDAK >Mature_206_residues MQDYKQPLRIGVGGPVGSGKTALLEVLCKTLRDTYQIAVVTNDIYTQEDAKILTQAEALAADRIIGVETGGCPHTAIRED ASMNLAAVEELAQRHKNLDVVFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPRKGGPGITKSDLLIINKIDLAPYVG ASLEVMESDTARMRPTRPYVFTNLKEGVGLDKIIEFIVDRGMLDAK
Specific function: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by ureG
COG id: COG0378
COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureG family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREG_VIBF1 (Q5E731)
Other databases:
- EMBL: CP000020 - RefSeq: YP_204053.1 - ProteinModelPortal: Q5E731 - SMR: Q5E731 - STRING: Q5E731 - GeneID: 3277791 - GenomeReviews: CP000020_GR - KEGG: vfi:VF_0670 - NMPDR: fig|312309.3.peg.1195 - eggNOG: COG0378 - HOGENOM: HBG364734 - OMA: LCKAMRE - ProtClustDB: CLSK936964 - BioCyc: VFIS312309:VF0670-MONOMER - GO: GO:0005737 - HAMAP: MF_01389 - InterPro: IPR003495 - InterPro: IPR012202 - InterPro: IPR004400 - PIRSF: PIRSF005624 - TIGRFAMs: TIGR00101
Pfam domain/function: PF02492 cobW
EC number: NA
Molecular weight: Translated: 22290; Mature: 22290
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDYKQPLRIGVGGPVGSGKTALLEVLCKTLRDTYQIAVVTNDIYTQEDAKILTQAEALA CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHH ADRIIGVETGGCPHTAIREDASMNLAAVEELAQRHKNLDVVFVESGGDNLSATFSPELAD HHCEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCE LTIYVIDVAEGEKIPRKGGPGITKSDLLIINKIDLAPYVGASLEVMESDTARMRPTRPYV EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCEE FTNLKEGVGLDKIIEFIVDRGMLDAK EECCHHCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQDYKQPLRIGVGGPVGSGKTALLEVLCKTLRDTYQIAVVTNDIYTQEDAKILTQAEALA CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHH ADRIIGVETGGCPHTAIREDASMNLAAVEELAQRHKNLDVVFVESGGDNLSATFSPELAD HHCEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCE LTIYVIDVAEGEKIPRKGGPGITKSDLLIINKIDLAPYVGASLEVMESDTARMRPTRPYV EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCEE FTNLKEGVGLDKIIEFIVDRGMLDAK EECCHHCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA