Click here to switch to the map view.

The map label for this gene is 59711163

Identifier: 59711163

GI number: 59711163

Start: 604032

End: 604394

Strand: Reverse

Name: 59711163

Synonym: VF_0556

Alternate gene names: NA

Gene position: 604394-604032 (Counterclockwise)

Preceding gene: 59711164

Following gene: 59711162

Centisome position: 20.86

GC content: 33.88

Gene sequence:

>363_bases
ATGATTGAAAGACGCAAGTTTTCTCGTGTAATTTATCAAGCAGATGTAGCACTAATCCAAGGCGCTCAGCAATACAGCGG
CTCATTGATTGATTTGTCTTTACATGGCTTATTAATAAAACTTAATGATGATAATGCTCTTAACTCAGCGGGTAAATTAA
TTGTACATTTTGCTCTAAACGACAGTGATATCAATATTATTGCTGAATGTGAAATTGTGAATGATACAAATAATCTGCTT
AGACTCTGTATTCGCCATATAGATATTGATAGTATTAGCCACCTTAAACGCTTAGTTGAACTTAACGTTGGTAATAGCGA
ACTATTATTACGTCAGTTATCAGAACTCACCGAAACACATTAA

Upstream 100 bases:

>100_bases
TGATGTTTATCATAAGGGCCGCACTCAAGCGGCCTTTTTATTGGACATAGAACAAACAAAACACCATACTCAATTTCTCT
TAAAAAGAAGGAGTAGCCTA

Downstream 100 bases:

>100_bases
CCTTTATAAATAGTTGTTACCCTTATGCCTGATAAAATTCGAATTTCCGTCTCCCACAACAAAGGAACGCGTCTTTTCGC
GATCTCCCAAAGACGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV Pilus Assembly Protein PilZ; Carbamoylphosphate Synthase Large Subunit; Signaling Protein

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MIERRKFSRVIYQADVALIQGAQQYSGSLIDLSLHGLLIKLNDDNALNSAGKLIVHFALNDSDINIIAECEIVNDTNNLL
RLCIRHIDIDSISHLKRLVELNVGNSELLLRQLSELTETH

Sequences:

>Translated_120_residues
MIERRKFSRVIYQADVALIQGAQQYSGSLIDLSLHGLLIKLNDDNALNSAGKLIVHFALNDSDINIIAECEIVNDTNNLL
RLCIRHIDIDSISHLKRLVELNVGNSELLLRQLSELTETH
>Mature_120_residues
MIERRKFSRVIYQADVALIQGAQQYSGSLIDLSLHGLLIKLNDDNALNSAGKLIVHFALNDSDINIIAECEIVNDTNNLL
RLCIRHIDIDSISHLKRLVELNVGNSELLLRQLSELTETH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13502; Mature: 13502

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERRKFSRVIYQADVALIQGAQQYSGSLIDLSLHGLLIKLNDDNALNSAGKLIVHFALN
CCCHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEC
DSDINIIAECEIVNDTNNLLRLCIRHIDIDSISHLKRLVELNVGNSELLLRQLSELTETH
CCCEEEEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIERRKFSRVIYQADVALIQGAQQYSGSLIDLSLHGLLIKLNDDNALNSAGKLIVHFALN
CCCHHHHHHHHHHHHHHHHHCHHHHCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEC
DSDINIIAECEIVNDTNNLLRLCIRHIDIDSISHLKRLVELNVGNSELLLRQLSELTETH
CCCEEEEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA