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The map label for this gene is yjjK [C]

Identifier: 59711164

GI number: 59711164

Start: 604509

End: 606176

Strand: Reverse

Name: yjjK [C]

Synonym: VF_0557

Alternate gene names: 59711164

Gene position: 606176-604509 (Counterclockwise)

Preceding gene: 59711167

Following gene: 59711163

Centisome position: 20.92

GC content: 42.75

Gene sequence:

>1668_bases
ATGGCTGAATACGTATATACAATGTCACGAGTGAGCAAAATTGTTCCTCCTAAAAGACAAATCCTGAAAGACATTTCTCT
TAGCTTCTTCCCTGGTGCAAAAATTGGTGTTTTGGGTCTAAATGGCTCAGGTAAATCAACACTACTTCGCATTATGGCAG
GTCTTGATACTGATATTGATGGTGAAGCTCGTCCACAAGCGGGATTAAATGTTGGCTATCTTCCCCAAGAACCTGTACTT
GATGAATCAAAAACAGTTCGTGAAATTGTTGAAGAGGCTGTTTCTGATGTAGCAGGTGCACTAGCTCGCCTTGATGCGGT
TTATGCAGCTTACGCTGAAGAAGGTGCTGATTTCGATGCTCTAGCTAAAGAGCAAGGTGAACTTGAAGCATTAATTCAAG
CAAAAGATGGTCATAATCTGGATAACGCTTTAGAGCGTGCAGCTGACGCACTACGTCTACCTGAGTGGGATGCTAAAATT
GAGCACTTATCTGGTGGTGAACGTCGCCGTGTTGCTATCTGTCGTCTTCTTCTAGAAAAACCTGATATGCTGCTACTTGA
TGAACCAACCAACCACCTTGATGCTGAATCAGTTGCATGGCTTGAGCACTTCCTTGTTGATTATTCAGGTACTGTTGTGG
CAATTACCCACGACCGTTATTTCCTTGATAACGCTGCTGGTTGGATCCTAGAGCTTGACCGTGGTGAAGGTATTCCATGG
GAAGGTAACTATACCTCTTGGCTTGAGCAAAAAGATGACCGTTTAAAACAAGAAGCGGCAAAAGAAAATGCTCGTCAGAA
AACGATTGAAAAAGAACTTGAGTGGGTTCGTCAAAACCCTAAAGGCCGCCAAGCTAAATCTAAAGCTCGTATGGCTCGTT
TTGAAGAACTACAAAGCTCTGATCACCAAAAACGTAATGAAACAAACGAACTGTTCATTCCGCCAGGTGAACGTCTAGGT
GACAAAGTTCTTGAAGTGAACAACCTAACTAAATCGTTCGGTGATCGTGTACTAATTGATGACCTATCATTCAGCATGCC
AAAAGGTGCTATCGTAGGTATCATCGGTGCCAATGGTGCAGGTAAATCAACACTATTTAAGATGCTAAGTGGTGCTGAAA
CACCGGATTCAGGTACGATTGAATTGGGTGAAACTGTAAAACTTGCTTCTGTTGATCAATTCCGTGATTCAATGGATGAC
ACAAAAACAGTTTTCCAAGAGATCTCTGAAGGCGCAGATATCATTAAGATCAACAATTTCGAAATCCCAGCTCGTGCTTA
CTGTTCTCGCTTTAACTTCAAAGGCAACGACCAACAAAAAATTATTGGTGAGTTATCTGGTGGTGAGCGTAACCGTGTTC
ACTTAGCTAAACTGCTAAAAACTGGCGGTAACGTACTGTTACTCGATGAACCTACCAATGACCTTGATGTTGAAACATTA
CGTGCACTAGAAGAAGCATTACTTGAGTTCCCTGGTTGTGCAATGGTTATCTCGCACGACCGTTGGTTCCTAGACCGTAT
CGCTACACACATTCTAGACTACCGTGATGAAGGCCAAGTAAACTTCTTTGAAGGTAACTACACTGAATACAGTGAATGGT
TGAAGAAGACCCTAGGTGCGCAAGCTGCTGAACCTCATCGCATCAAGTACAAGCGTATGACTAAGTAA

Upstream 100 bases:

>100_bases
AGTTTACTTATATTACCCTAGTAACTACAAAAATGAGTGTTAAACTATGTATCATAAATAGTAAATTAATATTTTCGTTA
ACCAACTCTAATAAGTGATT

Downstream 100 bases:

>100_bases
TAATTTACTTTATTTGATGTTTATCATAAGGGCCGCACTCAAGCGGCCTTTTTATTGGACATAGAACAAACAAAACACCA
TACTCAATTTCTCTTAAAAA

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MAEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTDIDGEARPQAGLNVGYLPQEPVL
DESKTVREIVEEAVSDVAGALARLDAVYAAYAEEGADFDALAKEQGELEALIQAKDGHNLDNALERAADALRLPEWDAKI
EHLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAESVAWLEHFLVDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
EGNYTSWLEQKDDRLKQEAAKENARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQSSDHQKRNETNELFIPPGERLG
DKVLEVNNLTKSFGDRVLIDDLSFSMPKGAIVGIIGANGAGKSTLFKMLSGAETPDSGTIELGETVKLASVDQFRDSMDD
TKTVFQEISEGADIIKINNFEIPARAYCSRFNFKGNDQQKIIGELSGGERNRVHLAKLLKTGGNVLLLDEPTNDLDVETL
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFFEGNYTEYSEWLKKTLGAQAAEPHRIKYKRMTK

Sequences:

>Translated_555_residues
MAEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTDIDGEARPQAGLNVGYLPQEPVL
DESKTVREIVEEAVSDVAGALARLDAVYAAYAEEGADFDALAKEQGELEALIQAKDGHNLDNALERAADALRLPEWDAKI
EHLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAESVAWLEHFLVDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
EGNYTSWLEQKDDRLKQEAAKENARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQSSDHQKRNETNELFIPPGERLG
DKVLEVNNLTKSFGDRVLIDDLSFSMPKGAIVGIIGANGAGKSTLFKMLSGAETPDSGTIELGETVKLASVDQFRDSMDD
TKTVFQEISEGADIIKINNFEIPARAYCSRFNFKGNDQQKIIGELSGGERNRVHLAKLLKTGGNVLLLDEPTNDLDVETL
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFFEGNYTEYSEWLKKTLGAQAAEPHRIKYKRMTK
>Mature_554_residues
AEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTDIDGEARPQAGLNVGYLPQEPVLD
ESKTVREIVEEAVSDVAGALARLDAVYAAYAEEGADFDALAKEQGELEALIQAKDGHNLDNALERAADALRLPEWDAKIE
HLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAESVAWLEHFLVDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPWE
GNYTSWLEQKDDRLKQEAAKENARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQSSDHQKRNETNELFIPPGERLGD
KVLEVNNLTKSFGDRVLIDDLSFSMPKGAIVGIIGANGAGKSTLFKMLSGAETPDSGTIELGETVKLASVDQFRDSMDDT
KTVFQEISEGADIIKINNFEIPARAYCSRFNFKGNDQQKIIGELSGGERNRVHLAKLLKTGGNVLLLDEPTNDLDVETLR
ALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFFEGNYTEYSEWLKKTLGAQAAEPHRIKYKRMTK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=27.9026217228464, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI27881506, Length=544, Percent_Identity=28.6764705882353, Blast_Score=172, Evalue=7e-43,
Organism=Homo sapiens, GI10947137, Length=544, Percent_Identity=28.6764705882353, Blast_Score=172, Evalue=8e-43,
Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=27.3394495412844, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=27.3394495412844, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI31657092, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI171184400, Length=268, Percent_Identity=26.865671641791, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=78.9189189189189, Blast_Score=910, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=33.3333333333333, Blast_Score=260, Evalue=2e-70,
Organism=Escherichia coli, GI1789751, Length=526, Percent_Identity=32.5095057034221, Blast_Score=236, Evalue=4e-63,
Organism=Escherichia coli, GI1787041, Length=535, Percent_Identity=31.7757009345794, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI48994943, Length=491, Percent_Identity=25.8655804480652, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI87081782, Length=572, Percent_Identity=24.1258741258741, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87081709, Length=197, Percent_Identity=28.4263959390863, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI87081791, Length=201, Percent_Identity=36.318407960199, Blast_Score=86, Evalue=9e-18,
Organism=Escherichia coli, GI1788165, Length=185, Percent_Identity=31.3513513513514, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788897, Length=213, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788225, Length=225, Percent_Identity=27.5555555555556, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787164, Length=188, Percent_Identity=27.6595744680851, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788450, Length=214, Percent_Identity=27.1028037383178, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787089, Length=245, Percent_Identity=30.2040816326531, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786975, Length=215, Percent_Identity=26.5116279069767, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787029, Length=253, Percent_Identity=29.2490118577075, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787105, Length=202, Percent_Identity=29.7029702970297, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786563, Length=194, Percent_Identity=26.2886597938144, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1790190, Length=200, Percent_Identity=28, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI48994997, Length=225, Percent_Identity=25.7777777777778, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=229, Percent_Identity=29.6943231441048, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786703, Length=210, Percent_Identity=30, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788644, Length=232, Percent_Identity=27.1551724137931, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1786872, Length=219, Percent_Identity=26.4840182648402, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=556, Percent_Identity=26.0791366906475, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=26.4814814814815, Blast_Score=178, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI17553372, Length=543, Percent_Identity=29.6500920810313, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI71988343, Length=259, Percent_Identity=26.2548262548263, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=202, Percent_Identity=26.2376237623762, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=171, Percent_Identity=32.1637426900585, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=549, Percent_Identity=26.9581056466302, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6320874, Length=535, Percent_Identity=29.1588785046729, Blast_Score=186, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6324314, Length=380, Percent_Identity=26.5789473684211, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=367, Percent_Identity=27.2479564032698, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=27.34375, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6320266, Length=491, Percent_Identity=21.7922606924644, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24666836, Length=537, Percent_Identity=29.4227188081937, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24642252, Length=546, Percent_Identity=28.2051282051282, Blast_Score=185, Evalue=9e-47,
Organism=Drosophila melanogaster, GI18859989, Length=546, Percent_Identity=28.2051282051282, Blast_Score=185, Evalue=9e-47,
Organism=Drosophila melanogaster, GI24641342, Length=534, Percent_Identity=28.6516853932584, Blast_Score=178, Evalue=1e-44,
Organism=Drosophila melanogaster, GI281363262, Length=188, Percent_Identity=27.6595744680851, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=188, Percent_Identity=27.6595744680851, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI23397593, Length=215, Percent_Identity=27.906976744186, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62023; Mature: 61892

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTDID
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPQAGLNVGYLPQEPVLDESKTVREIVEEAVSDVAGALARLDAVYAAYAEEGADFDA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAKEQGELEALIQAKDGHNLDNALERAADALRLPEWDAKIEHLSGGERRRVAICRLLLEK
HHHHCCHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLEHFLVDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCEEEEEECCCCCCC
EGNYTSWLEQKDDRLKQEAAKENARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DHQKRNETNELFIPPGERLGDKVLEVNNLTKSFGDRVLIDDLSFSMPKGAIVGIIGANGA
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCC
GKSTLFKMLSGAETPDSGTIELGETVKLASVDQFRDSMDDTKTVFQEISEGADIIKINNF
CHHHHHHHHHCCCCCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
EIPARAYCSRFNFKGNDQQKIIGELSGGERNRVHLAKLLKTGGNVLLLDEPTNDLDVETL
CCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFFEGNYTEYSEWLKKTLGA
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC
QAAEPHRIKYKRMTK
CCCCCCCCCHHCCCC
>Mature Secondary Structure 
AEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTDID
CHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPQAGLNVGYLPQEPVLDESKTVREIVEEAVSDVAGALARLDAVYAAYAEEGADFDA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LAKEQGELEALIQAKDGHNLDNALERAADALRLPEWDAKIEHLSGGERRRVAICRLLLEK
HHHHCCHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLEHFLVDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCEEEEEECCCCCCC
EGNYTSWLEQKDDRLKQEAAKENARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DHQKRNETNELFIPPGERLGDKVLEVNNLTKSFGDRVLIDDLSFSMPKGAIVGIIGANGA
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCC
GKSTLFKMLSGAETPDSGTIELGETVKLASVDQFRDSMDDTKTVFQEISEGADIIKINNF
CHHHHHHHHHCCCCCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
EIPARAYCSRFNFKGNDQQKIIGELSGGERNRVHLAKLLKTGGNVLLLDEPTNDLDVETL
CCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFFEGNYTEYSEWLKKTLGA
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC
QAAEPHRIKYKRMTK
CCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]