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The map label for this gene is yebA [C]

Identifier: 59711162

GI number: 59711162

Start: 602994

End: 604007

Strand: Reverse

Name: yebA [C]

Synonym: VF_0555

Alternate gene names: 59711162

Gene position: 604007-602994 (Counterclockwise)

Preceding gene: 59711163

Following gene: 59711154

Centisome position: 20.85

GC content: 38.56

Gene sequence:

>1014_bases
ATGCCTGATAAAATTCGAATTTCCGTCTCCCACAACAAAGGAACGCGTCTTTTCGCGATCTCCCAAAGACGAAAAAAGCT
GGTCATTTTATCTTTAGTACTTGGGGTTAGCTCATTTGCATTAAGTGGCTTTGGTCTACATTATTTCTATCAACAACAAG
AGTCAGCAAAAGTTGCTATCGCTGAACTGCAAAACAAAAATAATGTGCTAAACCAGTTAATTGTTGATAATAACAATAGT
AATCATGAGCTTACTCAACAACTAGAAGCAAAAGAAAATGAATTACTTGTTATTAGCCAACGTGTAGATGATGTTGAATC
TGTACTTGGCTTACAAGAAATATCAGAAGAAGATTCATCGTTAGCTGAAAAAACACTAGAGCAACGACTTGATGTTGCAG
CCATTGACTCGGCAGTTAGAGCGACCATGTTTCGCCTAATCCCGAATGATACTCCCCTACATTACACGAGAGAGTCATCC
AGTTTTGGACGCCGAACCAACCCTATTTCAGGTAAACGCCAACGCCACTTAGGTGTTGATTTAACCTGTAAGCGTGGAAC
CGAAATTTATGCTCCAGCTGATGGTGTTGTTGAACTAGCAAGAGCCAGTAATAAAGGTTACGGTAATCTATTAAAAGTTC
AGCATTCATTCGGTTTTATGACCATGTATGCACACCTACAAAAATTTAAAGTTCGCTCAGGGCAGTTCGTTAAAAAAGGT
GAACTGATTGCTACTTGTGGTAACTCTGGTAATTCAACAGGACCACACTTACATTATGAAGTGCGTTTCTTAGGTCGAGT
TTTAAATCCAAGATCGTTTATGGATTGGACGCCAGAAAAGTTTGATAGCCTCTTTGAAAAAGAACGAAGTGTAAAGTGGA
CACCTTTGGTTGACGTTATTAATAATGTAGTAAAACTGCAATTAAAGTTGACACAAAAACCAACGGTTGAACAAGTTGAA
GCGATTAACACAGCGAAAGCTGAAAACGAAAGTAGCCAACAATTGACACAATAA

Upstream 100 bases:

>100_bases
ACGCTTAGTTGAACTTAACGTTGGTAATAGCGAACTATTATTACGTCAGTTATCAGAACTCACCGAAACACATTAACCTT
TATAAATAGTTGTTACCCTT

Downstream 100 bases:

>100_bases
ACACCGTTTAATCAATACAAAAAGGGTTAGCTCATGGCTCACCCTTTTTACATTCTATGCCTTCTTACCTACACTAATTA
CGTTCACGGTGAATCGAATC

Product: TagE-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MPDKIRISVSHNKGTRLFAISQRRKKLVILSLVLGVSSFALSGFGLHYFYQQQESAKVAIAELQNKNNVLNQLIVDNNNS
NHELTQQLEAKENELLVISQRVDDVESVLGLQEISEEDSSLAEKTLEQRLDVAAIDSAVRATMFRLIPNDTPLHYTRESS
SFGRRTNPISGKRQRHLGVDLTCKRGTEIYAPADGVVELARASNKGYGNLLKVQHSFGFMTMYAHLQKFKVRSGQFVKKG
ELIATCGNSGNSTGPHLHYEVRFLGRVLNPRSFMDWTPEKFDSLFEKERSVKWTPLVDVINNVVKLQLKLTQKPTVEQVE
AINTAKAENESSQQLTQ

Sequences:

>Translated_337_residues
MPDKIRISVSHNKGTRLFAISQRRKKLVILSLVLGVSSFALSGFGLHYFYQQQESAKVAIAELQNKNNVLNQLIVDNNNS
NHELTQQLEAKENELLVISQRVDDVESVLGLQEISEEDSSLAEKTLEQRLDVAAIDSAVRATMFRLIPNDTPLHYTRESS
SFGRRTNPISGKRQRHLGVDLTCKRGTEIYAPADGVVELARASNKGYGNLLKVQHSFGFMTMYAHLQKFKVRSGQFVKKG
ELIATCGNSGNSTGPHLHYEVRFLGRVLNPRSFMDWTPEKFDSLFEKERSVKWTPLVDVINNVVKLQLKLTQKPTVEQVE
AINTAKAENESSQQLTQ
>Mature_336_residues
PDKIRISVSHNKGTRLFAISQRRKKLVILSLVLGVSSFALSGFGLHYFYQQQESAKVAIAELQNKNNVLNQLIVDNNNSN
HELTQQLEAKENELLVISQRVDDVESVLGLQEISEEDSSLAEKTLEQRLDVAAIDSAVRATMFRLIPNDTPLHYTRESSS
FGRRTNPISGKRQRHLGVDLTCKRGTEIYAPADGVVELARASNKGYGNLLKVQHSFGFMTMYAHLQKFKVRSGQFVKKGE
LIATCGNSGNSTGPHLHYEVRFLGRVLNPRSFMDWTPEKFDSLFEKERSVKWTPLVDVINNVVKLQLKLTQKPTVEQVEA
INTAKAENESSQQLTQ

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=44.3478260869565, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789099, Length=97, Percent_Identity=39.1752577319588, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082174, Length=112, Percent_Identity=33.9285714285714, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87082297, Length=100, Percent_Identity=37, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37926; Mature: 37794

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDKIRISVSHNKGTRLFAISQRRKKLVILSLVLGVSSFALSGFGLHYFYQQQESAKVAI
CCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
AELQNKNNVLNQLIVDNNNSNHELTQQLEAKENELLVISQRVDDVESVLGLQEISEEDSS
HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LAEKTLEQRLDVAAIDSAVRATMFRLIPNDTPLHYTRESSSFGRRTNPISGKRQRHLGVD
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCE
LTCKRGTEIYAPADGVVELARASNKGYGNLLKVQHSFGFMTMYAHLQKFKVRSGQFVKKG
EEECCCCEEECCCHHHHHHHHHCCCCCCCEEEEEHHCCHHHHHHHHHHHHCCCCCEEECC
ELIATCGNSGNSTGPHLHYEVRFLGRVLNPRSFMDWTPEKFDSLFEKERSVKWTPLVDVI
CEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
NNVVKLQLKLTQKPTVEQVEAINTAKAENESSQQLTQ
HHHHEEEEEECCCCCHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure 
PDKIRISVSHNKGTRLFAISQRRKKLVILSLVLGVSSFALSGFGLHYFYQQQESAKVAI
CCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
AELQNKNNVLNQLIVDNNNSNHELTQQLEAKENELLVISQRVDDVESVLGLQEISEEDSS
HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LAEKTLEQRLDVAAIDSAVRATMFRLIPNDTPLHYTRESSSFGRRTNPISGKRQRHLGVD
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCE
LTCKRGTEIYAPADGVVELARASNKGYGNLLKVQHSFGFMTMYAHLQKFKVRSGQFVKKG
EEECCCCEEECCCHHHHHHHHHCCCCCCCEEEEEHHCCHHHHHHHHHHHHCCCCCEEECC
ELIATCGNSGNSTGPHLHYEVRFLGRVLNPRSFMDWTPEKFDSLFEKERSVKWTPLVDVI
CEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
NNVVKLQLKLTQKPTVEQVEAINTAKAENESSQQLTQ
HHHHEEEEEECCCCCHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]