| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is regX3 [H]
Identifier: 55980783
GI number: 55980783
Start: 777945
End: 778307
Strand: Reverse
Name: regX3 [H]
Synonym: TTHA0814
Alternate gene names: 55980783
Gene position: 778307-777945 (Counterclockwise)
Preceding gene: 55980784
Following gene: 55980782
Centisome position: 42.08
GC content: 70.52
Gene sequence:
>363_bases ATGGCCGAGGTGCTGATCGTGGACGATGAGGAAAGCATCCTGGTTCCCCTGGAGTTTCTCTTTCGCAAGGCCGGGCACCG GGTGGAGCTGGCGAGGACGGGGGAGGAGGCCCTAAGCCGCCTCGCCGAGAGGCCCTACGCCCTCGTGGTCCTGGACCTCA TGCTCCCCGGGGTGGACGGGTTCCAGGTCCTCGAGGCCCTCAAGGCCCGCACCCCCGCCCCCAAGGTCCTGGTCCTCACC GCCAGGGGGCGGGAGGCGGACCGGGCCAAGGCCCTGGCCTTGGGGGCGGACGCCTTCCTGGCCAAACCCTTCGGCGTCCA GGACCTCATGGCGGAGGCGCGCCGCCTCCTGGAGGAAGGATGA
Upstream 100 bases:
>100_bases GCCATCGCCCGGAGGCTCTCGGAGGCCCTGGGCGGGCGGGTCTTTTTGGAAGACGGGGAAGGCGGGGTCTTCGTCTTCGC GTTACCCTTGGAGGGAGACC
Downstream 100 bases:
>100_bases ACGCCCTCCGCTTCCTCGGCGCCCTCCTCCTCGGCCTCCTCCTGGTGGCGGGAAGCCTCGCCCTCGGCCTCTTCCTCCTC CTGGAGGGCAACCCCGAGGC
Product: response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MAEVLIVDDEESILVPLEFLFRKAGHRVELARTGEEALSRLAERPYALVVLDLMLPGVDGFQVLEALKARTPAPKVLVLT ARGREADRAKALALGADAFLAKPFGVQDLMAEARRLLEEG
Sequences:
>Translated_120_residues MAEVLIVDDEESILVPLEFLFRKAGHRVELARTGEEALSRLAERPYALVVLDLMLPGVDGFQVLEALKARTPAPKVLVLT ARGREADRAKALALGADAFLAKPFGVQDLMAEARRLLEEG >Mature_119_residues AEVLIVDDEESILVPLEFLFRKAGHRVELARTGEEALSRLAERPYALVVLDLMLPGVDGFQVLEALKARTPAPKVLVLTA RGREADRAKALALGADAFLAKPFGVQDLMAEARRLLEEG
Specific function: Part of the two-component regulatory system senX3/regX3. Once phosphorylated by senX3, activates the expression of several operons/genes involved in phosphate assimilation and metabolism, such as pstSCAB, phnDCE, and phoA [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI87082012, Length=117, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=5e-16, Organism=Escherichia coli, GI1786784, Length=118, Percent_Identity=37.2881355932203, Blast_Score=75, Evalue=2e-15, Organism=Escherichia coli, GI1789809, Length=115, Percent_Identity=33.9130434782609, Blast_Score=74, Evalue=4e-15, Organism=Escherichia coli, GI1786911, Length=114, Percent_Identity=41.2280701754386, Blast_Score=73, Evalue=5e-15, Organism=Escherichia coli, GI1790860, Length=114, Percent_Identity=36.8421052631579, Blast_Score=72, Evalue=1e-14, Organism=Escherichia coli, GI1786599, Length=116, Percent_Identity=35.3448275862069, Blast_Score=68, Evalue=1e-13, Organism=Escherichia coli, GI1790437, Length=109, Percent_Identity=35.7798165137615, Blast_Score=68, Evalue=2e-13, Organism=Escherichia coli, GI1787375, Length=114, Percent_Identity=32.4561403508772, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI1790552, Length=115, Percent_Identity=36.5217391304348, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI1789402, Length=108, Percent_Identity=35.1851851851852, Blast_Score=66, Evalue=8e-13, Organism=Escherichia coli, GI1788394, Length=114, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI2367329, Length=117, Percent_Identity=38.4615384615385, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI1790863, Length=115, Percent_Identity=33.9130434782609, Blast_Score=63, Evalue=6e-12,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13108; Mature: 12976
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVLIVDDEESILVPLEFLFRKAGHRVELARTGEEALSRLAERPYALVVLDLMLPGVDG CCEEEEEECCCCEEHHHHHHHHHCCCEEEEHHCCHHHHHHHHHCCHHEEHHHHHHCCCCH FQVLEALKARTPAPKVLVLTARGREADRAKALALGADAFLAKPFGVQDLMAEARRLLEEG HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AEVLIVDDEESILVPLEFLFRKAGHRVELARTGEEALSRLAERPYALVVLDLMLPGVDG CEEEEEECCCCEEHHHHHHHHHCCCEEEEHHCCHHHHHHHHHCCHHEEHHHHHHCCCCH FQVLEALKARTPAPKVLVLTARGREADRAKALALGADAFLAKPFGVQDLMAEARRLLEEG HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA