| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980733
Identifier: 55980733
GI number: 55980733
Start: 730398
End: 731459
Strand: Reverse
Name: 55980733
Synonym: TTHA0764
Alternate gene names: NA
Gene position: 731459-730398 (Counterclockwise)
Preceding gene: 55980738
Following gene: 55980732
Centisome position: 39.54
GC content: 66.29
Gene sequence:
>1062_bases ATGTGGGAATACCTCATCCACGGCGAACCCACGCCCAGGCTCAAGCCTTTTCTGGAGGGCGTCGGAAAGGCCCTCGAGGC CCAAGGCTTCCGCCATAACCCCGAGTCCGAAGCCCCGAACCTCGTCCTCAACGCCATCACCCCGGAAAACCCAAGGCCCT ACCGCCGCAGGGCCCAGGCCACCTTCGTGGCCTCGGTCCTGGAGCTTCCCGAGTTTCCCCAAGACCCCCTGCGGGAGCTT TACCCCTACCTGGTCCGGGCGCTTTCCAACGTCCTCTTGGCCTACGTGCCGGGCCAGGGCGTCAAGTTCCTCACCCTGGA GCTCGGCCACTACGGGGAGCCCGAGGGCAAGGGGTTCTACGAGCGGGTGGCGGCGCGCCTAAGGCCCATCGCCTGCAGCC GCCTCGTCATCAACAACATCTTTGAGCCGGACCTCGAGCCCGAGCTCTGGCAGGGGGACGAGCTCACGGAGAGCATGTAC CGGGCGGGGAAGAAGCTCAAGGAGTGGGACCTCCTCCCCGCCCCCTTCCCCATTGAGGAGATCCTCCCCCCCGAGGACCT GAGGCACGTGAAAAGGCTCTACGGCATCGGGGGGCTCTCCTACGGAAACCTCTCCGTGCGCAAGGACGAGAAACGCTTCT GGATGTCGGCAAGCGGGGTGGACAAGGCGAACCTCCGGGAGATCGGCCGGGACATCCTCATGGTCAAGGACTACGACCCC GAGCGAAACGCCATCCTCCTCTCCGTCCCTCCCCATGTGGAGCCGAGGCGGGTGAGCGTGGACGCCATTGAGCACTGGAT GATCTACCGGGAGCACCCCGAGGTGGGGGCCATCCTCCACGTGCACGCCTGGATGGAGGGCGTGCCCGCCACCGCCTTCA ACTACCCCTGCGGCACCTACGAGCTCGCCCAGGCGGTGGCGGATAAGGTGAGGGAGGCCCCGGACCCCGCCCGGGCCGTG GTGGGGCTCAAGAACCACGGCCTCACCATCACCGGAAGAAGCCTGGACGAGATCCTGGAGCGCATAGAGGGCAAGCTCAT CCGCACCGTGCCCATGGCATGA
Upstream 100 bases:
>100_bases GGCCCACCCTAAGCCCGGGAAGCAAGGCCTCCTTTCCCCACAAGGCTTCCGCCATGGCCCCAGTATGGGGTAGGCTAGGG GCCAGGACAAGGAGGGCAGC
Downstream 100 bases:
>100_bases AGGCCCTCCTCTACACCCCATCCCTCCCCCGCTTCTTCGGGGCGAGGCTTCTCGGTAAGCGCTTTCCCAGAAAGCTCCTC CCCCTCAGGCTCGCCGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MWEYLIHGEPTPRLKPFLEGVGKALEAQGFRHNPESEAPNLVLNAITPENPRPYRRRAQATFVASVLELPEFPQDPLREL YPYLVRALSNVLLAYVPGQGVKFLTLELGHYGEPEGKGFYERVAARLRPIACSRLVINNIFEPDLEPELWQGDELTESMY RAGKKLKEWDLLPAPFPIEEILPPEDLRHVKRLYGIGGLSYGNLSVRKDEKRFWMSASGVDKANLREIGRDILMVKDYDP ERNAILLSVPPHVEPRRVSVDAIEHWMIYREHPEVGAILHVHAWMEGVPATAFNYPCGTYELAQAVADKVREAPDPARAV VGLKNHGLTITGRSLDEILERIEGKLIRTVPMA
Sequences:
>Translated_353_residues MWEYLIHGEPTPRLKPFLEGVGKALEAQGFRHNPESEAPNLVLNAITPENPRPYRRRAQATFVASVLELPEFPQDPLREL YPYLVRALSNVLLAYVPGQGVKFLTLELGHYGEPEGKGFYERVAARLRPIACSRLVINNIFEPDLEPELWQGDELTESMY RAGKKLKEWDLLPAPFPIEEILPPEDLRHVKRLYGIGGLSYGNLSVRKDEKRFWMSASGVDKANLREIGRDILMVKDYDP ERNAILLSVPPHVEPRRVSVDAIEHWMIYREHPEVGAILHVHAWMEGVPATAFNYPCGTYELAQAVADKVREAPDPARAV VGLKNHGLTITGRSLDEILERIEGKLIRTVPMA >Mature_353_residues MWEYLIHGEPTPRLKPFLEGVGKALEAQGFRHNPESEAPNLVLNAITPENPRPYRRRAQATFVASVLELPEFPQDPLREL YPYLVRALSNVLLAYVPGQGVKFLTLELGHYGEPEGKGFYERVAARLRPIACSRLVINNIFEPDLEPELWQGDELTESMY RAGKKLKEWDLLPAPFPIEEILPPEDLRHVKRLYGIGGLSYGNLSVRKDEKRFWMSASGVDKANLREIGRDILMVKDYDP ERNAILLSVPPHVEPRRVSVDAIEHWMIYREHPEVGAILHVHAWMEGVPATAFNYPCGTYELAQAVADKVREAPDPARAV VGLKNHGLTITGRSLDEILERIEGKLIRTVPMA
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39987; Mature: 39987
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEYLIHGEPTPRLKPFLEGVGKALEAQGFRHNPESEAPNLVLNAITPENPRPYRRRAQA CCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH TFVASVLELPEFPQDPLRELYPYLVRALSNVLLAYVPGQGVKFLTLELGHYGEPEGKGFY HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCHH ERVAARLRPIACSRLVINNIFEPDLEPELWQGDELTESMYRAGKKLKEWDLLPAPFPIEE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCHHH ILPPEDLRHVKRLYGIGGLSYGNLSVRKDEKRFWMSASGVDKANLREIGRDILMVKDYDP CCCCHHHHHHHHHHCCCCCCCCCCEEEECHHHHEECCCCCCHHHHHHHCCCEEEEECCCC ERNAILLSVPPHVEPRRVSVDAIEHWMIYREHPEVGAILHVHAWMEGVPATAFNYPCGTY CCCEEEEECCCCCCCCEEEHHHHHHHHHEECCCCCCCEEEEEHHHCCCCCCCCCCCCCHH ELAQAVADKVREAPDPARAVVGLKNHGLTITGRSLDEILERIEGKLIRTVPMA HHHHHHHHHHHCCCCHHHHEEEECCCCEEEECCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MWEYLIHGEPTPRLKPFLEGVGKALEAQGFRHNPESEAPNLVLNAITPENPRPYRRRAQA CCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH TFVASVLELPEFPQDPLRELYPYLVRALSNVLLAYVPGQGVKFLTLELGHYGEPEGKGFY HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCHH ERVAARLRPIACSRLVINNIFEPDLEPELWQGDELTESMYRAGKKLKEWDLLPAPFPIEE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCHHH ILPPEDLRHVKRLYGIGGLSYGNLSVRKDEKRFWMSASGVDKANLREIGRDILMVKDYDP CCCCHHHHHHHHHHCCCCCCCCCCEEEECHHHHEECCCCCCHHHHHHHCCCEEEEECCCC ERNAILLSVPPHVEPRRVSVDAIEHWMIYREHPEVGAILHVHAWMEGVPATAFNYPCGTY CCCEEEEECCCCCCCCEEEHHHHHHHHHEECCCCCCCEEEEEHHHCCCCCCCCCCCCCHH ELAQAVADKVREAPDPARAVVGLKNHGLTITGRSLDEILERIEGKLIRTVPMA HHHHHHHHHHHCCCCHHHHEEEECCCCEEEECCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA