Click here to switch to the map view.

The map label for this gene is ahpD [H]

Identifier: 54295191

GI number: 54295191

Start: 2589723

End: 2590238

Strand: Reverse

Name: ahpD [H]

Synonym: lpl2271

Alternate gene names: 54295191

Gene position: 2590238-2589723 (Counterclockwise)

Preceding gene: 54295192

Following gene: 54295189

Centisome position: 77.42

GC content: 41.86

Gene sequence:

>516_bases
ATGTTAGAGAATGTTAAAGAAAGTATACCGGAAGTGGCTAAGGACATACGCTTGAATTTGACTAAGGTACTTGATCTGGA
ACAAAGTGATGGATTAAGTGAGCATCAGATTTTAGGTTCTGCATTGGCTGTGAGTTATTCTTTAGGCAATGAGGTTCTAA
TTAAAGGACTTAAAGAATTGGTGCATAACGAACAGATTGTGCGTGCAGCACAACTTGCGGCAAGCCTTATGGCGATGACA
AATATATACTATCGCTTTGTTCATTTAACTGAAATTAAGGAAATTGAGCACATTCCTGCAGGATTGCGAATGCAAGGAAT
GATGACTCCAGGGGTAGACAGGGCAACCTTTGAAATATTGTCTCTTGCTGTTTCTGCTCTCAATGGTTGTGGGGCTTGTG
TCAGCTCTCACGCTCGTCAATTGAAAGAGCACGGCTTATCCGATACAAGCCTTGCACGAGTTGGACGTATTACTGCTGTG
ATTCATGCGGTTCATGTGAGTGGTCGAATCAAATAA

Upstream 100 bases:

>100_bases
TTCTGGATGCTTTACAGACCGATGAACTTTGTCCATGTAATTGGAAAAAAGGTGAAGAAACAATTCATATCAAATAAATT
AAAAAAAAGAGGCATCAATC

Downstream 100 bases:

>100_bases
ATCATTGCATTTGAAGCAGATTATCTGCTTCAAATGCAAAAAACTATTTAATGACGCCGCAAGCTATACGGTCCCCCCCG
CCACCTTGTGGAGGATTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Alkylhydroperoxidase AhpD [H]

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKELVHNEQIVRAAQLAASLMAMT
NIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRATFEILSLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAV
IHAVHVSGRIK

Sequences:

>Translated_171_residues
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKELVHNEQIVRAAQLAASLMAMT
NIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRATFEILSLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAV
IHAVHVSGRIK
>Mature_171_residues
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKELVHNEQIVRAAQLAASLMAMT
NIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRATFEILSLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAV
IHAVHVSGRIK

Specific function: Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity [H]

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AhpD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004674
- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 18590; Mature: 18590

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKEL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VHNEQIVRAAQLAASLMAMTNIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRATFEIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHH
SLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAVIHAVHVSGRIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKEL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VHNEQIVRAAQLAASLMAMTNIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRATFEIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHH
SLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAVIHAVHVSGRIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA