Click here to switch to the map view.

The map label for this gene is 54293157

Identifier: 54293157

GI number: 54293157

Start: 229638

End: 230066

Strand: Direct

Name: 54293157

Synonym: lpl0199

Alternate gene names: NA

Gene position: 229638-230066 (Clockwise)

Preceding gene: 54293156

Following gene: 54293158

Centisome position: 6.86

GC content: 37.53

Gene sequence:

>429_bases
ATGACAGTAAAATATAAAGACAGCCTAGAATACAAAGCACTTCAACGTATTAAGAAAATACGTAGTAATGTCGTGCTGCG
CCAAGATCTTATAGATCTCGGCTCCTATCGTCAGGTTAGTCGTGTTTTTAAGAAACTGATGGATGACAATAAGTTGGTTA
AAATTGGAGCTGGTGTTTATGCAAAAGCATATTTATCAGAAATGCTCAATGTACCCATTATTCAAGGTGGTTTTGAGCAA
GCTTGTAAAGAAGCTTTAACTAAGAAAGGTATTGAATGGGAACTTAGTACAGCAGCTCAAGAGTATAATGCAGGGCGTAC
AACACAAGTTCCTGTGCGTACTTCTGTTCGATTAAAAAGTCGCTATCGAGGCACGTTGTCTTTTGGCAAAAGAAAATTAA
TTGCGGAGAAACAAATTAATGCTCGATAG

Upstream 100 bases:

>100_bases
AAGGGAATTTATTATATTTAATGTGTCCTAAATGTGTCCTAAATTGACGCTAATTTCATGTGTGCTATAATTAAAATAAG
TCCTAAATCGGCGAATTATT

Downstream 100 bases:

>100_bases
CTCTATGTTTCAATATATTGAAACCACTGCAAATACTTTAGACTTGCCTGAATCTGTTATTGAAAAGGATTATTATGTCA
CTCAGGTAATTCAATCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTVKYKDSLEYKALQRIKKIRSNVVLRQDLIDLGSYRQVSRVFKKLMDDNKLVKIGAGVYAKAYLSEMLNVPIIQGGFEQ
ACKEALTKKGIEWELSTAAQEYNAGRTTQVPVRTSVRLKSRYRGTLSFGKRKLIAEKQINAR

Sequences:

>Translated_142_residues
MTVKYKDSLEYKALQRIKKIRSNVVLRQDLIDLGSYRQVSRVFKKLMDDNKLVKIGAGVYAKAYLSEMLNVPIIQGGFEQ
ACKEALTKKGIEWELSTAAQEYNAGRTTQVPVRTSVRLKSRYRGTLSFGKRKLIAEKQINAR
>Mature_141_residues
TVKYKDSLEYKALQRIKKIRSNVVLRQDLIDLGSYRQVSRVFKKLMDDNKLVKIGAGVYAKAYLSEMLNVPIIQGGFEQA
CKEALTKKGIEWELSTAAQEYNAGRTTQVPVRTSVRLKSRYRGTLSFGKRKLIAEKQINAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16216; Mature: 16085

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKYKDSLEYKALQRIKKIRSNVVLRQDLIDLGSYRQVSRVFKKLMDDNKLVKIGAGVY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCHH
AKAYLSEMLNVPIIQGGFEQACKEALTKKGIEWELSTAAQEYNAGRTTQVPVRTSVRLKS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHH
RYRGTLSFGKRKLIAEKQINAR
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TVKYKDSLEYKALQRIKKIRSNVVLRQDLIDLGSYRQVSRVFKKLMDDNKLVKIGAGVY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCHH
AKAYLSEMLNVPIIQGGFEQACKEALTKKGIEWELSTAAQEYNAGRTTQVPVRTSVRLKS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHH
RYRGTLSFGKRKLIAEKQINAR
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA