Click here to switch to the map view.

The map label for this gene is 54293158

Identifier: 54293158

GI number: 54293158

Start: 230056

End: 231003

Strand: Direct

Name: 54293158

Synonym: lpl0200

Alternate gene names: NA

Gene position: 230056-231003 (Clockwise)

Preceding gene: 54293157

Following gene: 54293160

Centisome position: 6.88

GC content: 38.29

Gene sequence:

>948_bases
ATGCTCGATAGCTCTATGTTTCAATATATTGAAACCACTGCAAATACTTTAGACTTGCCTGAATCTGTTATTGAAAAGGA
TTATTATGTCACTCAGGTAATTCAATCCCTTTCTAAAATAGAAAACGAATACTTCCGTTTGGTCTTTTGTGGTGGTACTT
GCTTGGCTAAAGCGCATAAAGTCGTGCAGCGTATGTCTGAGGATGTAGATTTTAAAATTCAGCGTAAATCTACTACAGAT
GGTTTTAGTAAATCTCATCTGTTGAAAGAACTTAAGGCTTTTCGGCTTCAGCTTCAATCAAACTTTGCAATTCCTAATCT
TACAGCAAGTGAGCCAGTGGTGCGTAATGAGGGAAAGTATTCACGGGTTGAATTTTTTTATCCTTCAGAGTTTACTCGTA
ATGCGACTTTAAGACCCCATATACTCTTTGAATTTACTTTATCAAATATTCGTTGTGATATTGTAACACGCTCTGTAAAA
ACTCTGATGGAAGACACATTTCCCAGTTTAAGCTTATTTCCTCAAAGCCAAACCCATTGCGTTGCTGTGCATGAAACGGC
TATTGAGAAATGGGTGGGTTTAACAAGGCGCATCATAGCGATTGAACGAGGATATCATTATGATGATCCATCATTGATTC
GCCACGTTTACGATCTTAATGCTATTGAATCGGCCGAACCTATTACTGACGATTTTTTAATGCTGGCTAAGGAGGTTATC
CTAACCGATGCACAGCAATTTAAAAATCAAAATCCTGAATATGCAGCCAACCCAGTAGAGGAAATTAATCGCTCGCTTGA
TCTACTGCGCGCCAAACCTTTATGGCGAGAGCGCTATCAAGATTTTATTGAAAATATGGTGTTTAATCCCAGCCTAGCTA
CTGATTATGATAAAGCCATCAATGTGATTGCGGATCTCAGCAAAAAAGTCGTTTCCTACTTACACTAA

Upstream 100 bases:

>100_bases
ACAACACAAGTTCCTGTGCGTACTTCTGTTCGATTAAAAAGTCGCTATCGAGGCACGTTGTCTTTTGGCAAAAGAAAATT
AATTGCGGAGAAACAAATTA

Downstream 100 bases:

>100_bases
GATCGAATGGGGGTACATTTGGGGGTATATTTTTATCAATCATAAAAATAACCCTTTAAATACAACACATTGATTAATCA
ATTAAATAGCCGTCGCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MLDSSMFQYIETTANTLDLPESVIEKDYYVTQVIQSLSKIENEYFRLVFCGGTCLAKAHKVVQRMSEDVDFKIQRKSTTD
GFSKSHLLKELKAFRLQLQSNFAIPNLTASEPVVRNEGKYSRVEFFYPSEFTRNATLRPHILFEFTLSNIRCDIVTRSVK
TLMEDTFPSLSLFPQSQTHCVAVHETAIEKWVGLTRRIIAIERGYHYDDPSLIRHVYDLNAIESAEPITDDFLMLAKEVI
LTDAQQFKNQNPEYAANPVEEINRSLDLLRAKPLWRERYQDFIENMVFNPSLATDYDKAINVIADLSKKVVSYLH

Sequences:

>Translated_315_residues
MLDSSMFQYIETTANTLDLPESVIEKDYYVTQVIQSLSKIENEYFRLVFCGGTCLAKAHKVVQRMSEDVDFKIQRKSTTD
GFSKSHLLKELKAFRLQLQSNFAIPNLTASEPVVRNEGKYSRVEFFYPSEFTRNATLRPHILFEFTLSNIRCDIVTRSVK
TLMEDTFPSLSLFPQSQTHCVAVHETAIEKWVGLTRRIIAIERGYHYDDPSLIRHVYDLNAIESAEPITDDFLMLAKEVI
LTDAQQFKNQNPEYAANPVEEINRSLDLLRAKPLWRERYQDFIENMVFNPSLATDYDKAINVIADLSKKVVSYLH
>Mature_315_residues
MLDSSMFQYIETTANTLDLPESVIEKDYYVTQVIQSLSKIENEYFRLVFCGGTCLAKAHKVVQRMSEDVDFKIQRKSTTD
GFSKSHLLKELKAFRLQLQSNFAIPNLTASEPVVRNEGKYSRVEFFYPSEFTRNATLRPHILFEFTLSNIRCDIVTRSVK
TLMEDTFPSLSLFPQSQTHCVAVHETAIEKWVGLTRRIIAIERGYHYDDPSLIRHVYDLNAIESAEPITDDFLMLAKEVI
LTDAQQFKNQNPEYAANPVEEINRSLDLLRAKPLWRERYQDFIENMVFNPSLATDYDKAINVIADLSKKVVSYLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36443; Mature: 36443

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSSMFQYIETTANTLDLPESVIEKDYYVTQVIQSLSKIENEYFRLVFCGGTCLAKAHK
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHH
VVQRMSEDVDFKIQRKSTTDGFSKSHLLKELKAFRLQLQSNFAIPNLTASEPVVRNEGKY
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SRVEFFYPSEFTRNATLRPHILFEFTLSNIRCDIVTRSVKTLMEDTFPSLSLFPQSQTHC
CEEEEECCCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHCCCCCEECCCCCCCE
VAVHETAIEKWVGLTRRIIAIERGYHYDDPSLIRHVYDLNAIESAEPITDDFLMLAKEVI
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LTDAQQFKNQNPEYAANPVEEINRSLDLLRAKPLWRERYQDFIENMVFNPSLATDYDKAI
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
NVIADLSKKVVSYLH
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDSSMFQYIETTANTLDLPESVIEKDYYVTQVIQSLSKIENEYFRLVFCGGTCLAKAHK
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHH
VVQRMSEDVDFKIQRKSTTDGFSKSHLLKELKAFRLQLQSNFAIPNLTASEPVVRNEGKY
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SRVEFFYPSEFTRNATLRPHILFEFTLSNIRCDIVTRSVKTLMEDTFPSLSLFPQSQTHC
CEEEEECCCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHCCCCCEECCCCCCCE
VAVHETAIEKWVGLTRRIIAIERGYHYDDPSLIRHVYDLNAIESAEPITDDFLMLAKEVI
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LTDAQQFKNQNPEYAANPVEEINRSLDLLRAKPLWRERYQDFIENMVFNPSLATDYDKAI
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
NVIADLSKKVVSYLH
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA