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The map label for this gene is insF1 [H]

Identifier: 54293156

GI number: 54293156

Start: 228460

End: 229344

Strand: Direct

Name: insF1 [H]

Synonym: lpl0198

Alternate gene names: 54293156

Gene position: 228460-229344 (Clockwise)

Preceding gene: 54293155

Following gene: 54293157

Centisome position: 6.83

GC content: 40.9

Gene sequence:

>885_bases
ATAAAATATTCGTTTATCGCCCAACATAAGAAGACCTGGCCGGTTGGCATGATGTGCCAACTCATGGGCGTTACTTCTTC
CGGGTACTATAGCTATCAAAAACGGAAGAGTACAAAAACGAACAATGAACCAGAACATGAAGAGCTATTGGAGTGGGTTA
AAAAAATATCGGAATCCAGCAAGTTTTCGTATGGAAATCGCAGGATAAGGAAAGCACTGAATGCTCTTGGTTATCCGGTT
GGCCGCAGAAAAACCCATAGATTAATGCGTGAAGCGGGTATTTTTGTTCGCTATAAAAAGAAATACAAAGTGACAACAAA
CAGCAATCACAAGCAACCTATTTTTGATAATGTTTTAAACAGGAAATTTCAGGTCAATGAACCCAATCGTGCCTATGTGT
CCGATATGACCTATATCCCAACCCATGAGGGCTGGTTATACCTGACGGTGGTAATTGATTTGTTTTCCCGAAAAGTGGTT
GGTTGGAACATGAGTTCGAGAATGAAGGCTGATACAGTTTGCGATGCATTAACAATGGCCATTTGGCAGAGAAAGCCAAA
AGCAGGCCTTATTGTGCATTCCGACAGGGGCTCACAATATGCCAGTAAACAATATCGCAGCCTTCTCAATCAACATGGCC
TTGTGGGCAGCATGAGCAAAAAAGGTGACTGCTGGGACAATAGCGTTGCTGAGAGTTTTTTCAGCCACTTGAAGGATGAA
TTAGTTCATTGGCGTAATTATCAAACCAGACGGGAGGCAAAACAAGATATTCTAGATTACATGACTATGTTTTATAACAA
TCAAAGATTGCATTCGTCTTTGGATTATCTAAGTCCGAATCAATTTGAAAATCGGTACTGGGGGTTAATGAAAAAAGTGG
CTTAA

Upstream 100 bases:

>100_bases
AGCAACTTGAAATTCGTCAGTTACGAGAAGAAGTCAGAAGGCTGACAATGGAGAAAGAAATACTAAAAAAAGCCACGGTC
TTCTTTGCGAAAGAAGCGAA

Downstream 100 bases:

>100_bases
CTGGGGTGTACAAATTTGCTTGACCACGTCAGTATATTGCTGGTGTAGAACGTGATAATGGCGTAAGTTTTGAACCTCAA
TCCAAGCTAGAAATATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKYSFIAQHKKTWPVGMMCQLMGVTSSGYYSYQKRKSTKTNNEPEHEELLEWVKKISESSKFSYGNRRIRKALNALGYPV
GRRKTHRLMREAGIFVRYKKKYKVTTNSNHKQPIFDNVLNRKFQVNEPNRAYVSDMTYIPTHEGWLYLTVVIDLFSRKVV
GWNMSSRMKADTVCDALTMAIWQRKPKAGLIVHSDRGSQYASKQYRSLLNQHGLVGSMSKKGDCWDNSVAESFFSHLKDE
LVHWRNYQTRREAKQDILDYMTMFYNNQRLHSSLDYLSPNQFENRYWGLMKKVA

Sequences:

>Translated_294_residues
MKYSFIAQHKKTWPVGMMCQLMGVTSSGYYSYQKRKSTKTNNEPEHEELLEWVKKISESSKFSYGNRRIRKALNALGYPV
GRRKTHRLMREAGIFVRYKKKYKVTTNSNHKQPIFDNVLNRKFQVNEPNRAYVSDMTYIPTHEGWLYLTVVIDLFSRKVV
GWNMSSRMKADTVCDALTMAIWQRKPKAGLIVHSDRGSQYASKQYRSLLNQHGLVGSMSKKGDCWDNSVAESFFSHLKDE
LVHWRNYQTRREAKQDILDYMTMFYNNQRLHSSLDYLSPNQFENRYWGLMKKVA
>Mature_294_residues
MKYSFIAQHKKTWPVGMMCQLMGVTSSGYYSYQKRKSTKTNNEPEHEELLEWVKKISESSKFSYGNRRIRKALNALGYPV
GRRKTHRLMREAGIFVRYKKKYKVTTNSNHKQPIFDNVLNRKFQVNEPNRAYVSDMTYIPTHEGWLYLTVVIDLFSRKVV
GWNMSSRMKADTVCDALTMAIWQRKPKAGLIVHSDRGSQYASKQYRSLLNQHGLVGSMSKKGDCWDNSVAESFFSHLKDE
LVHWRNYQTRREAKQDILDYMTMFYNNQRLHSSLDYLSPNQFENRYWGLMKKVA

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=262, Percent_Identity=34.7328244274809, Blast_Score=156, Evalue=2e-38,
Organism=Escherichia coli, GI1788405, Length=285, Percent_Identity=39.2982456140351, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1787263, Length=285, Percent_Identity=39.2982456140351, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1786753, Length=285, Percent_Identity=39.2982456140351, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1786570, Length=285, Percent_Identity=39.2982456140351, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1786490, Length=285, Percent_Identity=39.2982456140351, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1789981, Length=282, Percent_Identity=28.0141843971631, Blast_Score=128, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34692; Mature: 34692

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSFIAQHKKTWPVGMMCQLMGVTSSGYYSYQKRKSTKTNNEPEHEELLEWVKKISESS
CCCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
KFSYGNRRIRKALNALGYPVGRRKTHRLMREAGIFVRYKKKYKVTTNSNHKQPIFDNVLN
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECEEEEECCCCCCCCHHHHHHC
RKFQVNEPNRAYVSDMTYIPTHEGWLYLTVVIDLFSRKVVGWNMSSRMKADTVCDALTMA
CCEECCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IWQRKPKAGLIVHSDRGSQYASKQYRSLLNQHGLVGSMSKKGDCWDNSVAESFFSHLKDE
HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LVHWRNYQTRREAKQDILDYMTMFYNNQRLHSSLDYLSPNQFENRYWGLMKKVA
HHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYSFIAQHKKTWPVGMMCQLMGVTSSGYYSYQKRKSTKTNNEPEHEELLEWVKKISESS
CCCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
KFSYGNRRIRKALNALGYPVGRRKTHRLMREAGIFVRYKKKYKVTTNSNHKQPIFDNVLN
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECEEEEECCCCCCCCHHHHHHC
RKFQVNEPNRAYVSDMTYIPTHEGWLYLTVVIDLFSRKVVGWNMSSRMKADTVCDALTMA
CCEECCCCCCHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IWQRKPKAGLIVHSDRGSQYASKQYRSLLNQHGLVGSMSKKGDCWDNSVAESFFSHLKDE
HHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LVHWRNYQTRREAKQDILDYMTMFYNNQRLHSSLDYLSPNQFENRYWGLMKKVA
HHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]