Definition | Mycoplasma hyopneumoniae 232, complete genome. |
---|---|
Accession | NC_006360 |
Length | 892,758 |
Click here to switch to the map view.
The map label for this gene is 54020159
Identifier: 54020159
GI number: 54020159
Start: 430738
End: 432336
Strand: Direct
Name: 54020159
Synonym: mhp364
Alternate gene names: NA
Gene position: 430738-432336 (Clockwise)
Preceding gene: 54020158
Following gene: 54020160
Centisome position: 48.25
GC content: 29.39
Gene sequence:
>1599_bases GTGAAAACTCGATTCAAAAAGAAAAAAAACTGGTATAAATCTCTATTTTTTCTAGTACTAAATTTTTCCTTTCTTAGTCT TAGTGGCTGCAGAGTTATAACTGAGACTTCAGAAAAAGCACAAGAAGATAAAAAAATTAGTTCTGAAATTGTAAAAAATT ATATCGAGAATGCTTTTGTTGAAAACATTTTACAAGAAAATGTTTTCAAAACAACAAGTCCAAAACTTGTTTTAGAATTT GAAAATACAAATTCGGAATTTTATAAAAATACAAAAGAAGCTTTTGATTTTTATCAAAAATATCAGGTAAGCCTTGATCC GACTTTTTCACTTAAATTAGTCGCCGATCTTCAGGAAAAAAATGCACTTTCAAGTGCAGATTTTGCCATTCTTTCAGCCC AGGCAGGTTATAATAAATTATTTGATAGTCAGGCTTTTATTATTTTATATAAAAATTTTGCTACTGGAATTTCCCAAATT GTTAATAAGATGCTTTTAGTAAAATATTATCTTGTTAGTCTTGGACCTGATTTAATAAAAGATTCACAAATTTATAAGGA TGGAATTGCAGCTTCAGCCTCTTTTACAACAAAGGAAATTTTTGAAAATATAGACCCAAATTCTCCTGATTTTTTCCTAA TTCACCTACTTTTAACGAAAAATCCGGTTCAAATTTGACAATTTGAATCAAGTGATCAAAGTAGTATTTCAACCTTTTCA CAACTAAAAGTTAAAGATCTAAACTCATTTAACAACCTTTTACGCAGCGAAAATATTACTTCAAAACTTACAAGAAAAGA AAAAGACTTTGAAAAATTAGCAAAAAATGATAGTCTTGATACAACAAATATGCTTGGATATGCCGGGATTTTGTATCGTC AAGATGCAAATTTAGCAGATTTAAGCTTTCAATTTGAAGATTTACGCAAGCAAGGTGAAGTCAAATCCGGCTTTTTAGAT CCACAGTCAAATCGAATTTGATCTTCTGAACAAATTAGAAATTTTAGCTTAATTAATAAAGCGAAAATGTTTCCAGTAGA ACTAAGGCAAAATTTTGACTTTAAAACAGGTAAAGATAAGGTCCAAATTTCTGATTTTGAAATTAAAAATGATAACAGTC TTCCTGAGGCAAAATATAAAATTAAAGCAATTATCCCTTCTCGTGAAGGTTCTGGTAATAATTTTTTTGTCAGTGTAATT GTTGAGATCGAACTTGGTTCAGCAAAATATTTTTATAATGTTGATGTTAGTTGGGATGAGACAAAAGCATATTATTATCC TGAAATTAAACCCCAAGGTGAAGATCTTCCAAAACTTAGTCAAGGAATCCCAACAACTTTTAAAGATCTTTCAAAAATTT CGGTTAAATACGTTAATAAATTAGCGCCTTTATATGATAAAATAGTGCAAGGCGAAAACGGAAAACGAGCCTATTTTTCT CTTGAAAATACACCTTGAAATACCCAAGAACAAAAAATAAAACTCGCTTATTCTTTATATTTAGCCGATGAGACCGGAAT TTATCGGGATGCAAAAAACTTTTTTGAAGGACTTGGTTATAAAATTGAATCAAAAGACGAGATTATCAAACTAGATTAG
Upstream 100 bases:
>100_bases TTGGGAGCTAAGATCAGATCCAAATACTGAACTTCGTCAAGCGATAATTAAGCGGCTTGAAAGTTTGTTTAAATTTAGCT ATTAAAAGAAAGGATAATTT
Downstream 100 bases:
>100_bases CGCTAAATTTTACTAAATTAGACAGGAAATTATGGAAAATACTACTTTATTTCTAGATATAATTGCAAAAAAATTACCAG CAAAAATAATTTATGAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipo-Like Protein
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MKTRFKKKKNWYKSLFFLVLNFSFLSLSGCRVITETSEKAQEDKKISSEIVKNYIENAFVENILQENVFKTTSPKLVLEF ENTNSEFYKNTKEAFDFYQKYQVSLDPTFSLKLVADLQEKNALSSADFAILSAQAGYNKLFDSQAFIILYKNFATGISQI VNKMLLVKYYLVSLGPDLIKDSQIYKDGIAASASFTTKEIFENIDPNSPDFFLIHLLLTKNPVQIWQFESSDQSSISTFS QLKVKDLNSFNNLLRSENITSKLTRKEKDFEKLAKNDSLDTTNMLGYAGILYRQDANLADLSFQFEDLRKQGEVKSGFLD PQSNRIWSSEQIRNFSLINKAKMFPVELRQNFDFKTGKDKVQISDFEIKNDNSLPEAKYKIKAIIPSREGSGNNFFVSVI VEIELGSAKYFYNVDVSWDETKAYYYPEIKPQGEDLPKLSQGIPTTFKDLSKISVKYVNKLAPLYDKIVQGENGKRAYFS LENTPWNTQEQKIKLAYSLYLADETGIYRDAKNFFEGLGYKIESKDEIIKLD
Sequences:
>Translated_532_residues MKTRFKKKKNWYKSLFFLVLNFSFLSLSGCRVITETSEKAQEDKKISSEIVKNYIENAFVENILQENVFKTTSPKLVLEF ENTNSEFYKNTKEAFDFYQKYQVSLDPTFSLKLVADLQEKNALSSADFAILSAQAGYNKLFDSQAFIILYKNFATGISQI VNKMLLVKYYLVSLGPDLIKDSQIYKDGIAASASFTTKEIFENIDPNSPDFFLIHLLLTKNPVQI*QFESSDQSSISTFS QLKVKDLNSFNNLLRSENITSKLTRKEKDFEKLAKNDSLDTTNMLGYAGILYRQDANLADLSFQFEDLRKQGEVKSGFLD PQSNRI*SSEQIRNFSLINKAKMFPVELRQNFDFKTGKDKVQISDFEIKNDNSLPEAKYKIKAIIPSREGSGNNFFVSVI VEIELGSAKYFYNVDVSWDETKAYYYPEIKPQGEDLPKLSQGIPTTFKDLSKISVKYVNKLAPLYDKIVQGENGKRAYFS LENTP*NTQEQKIKLAYSLYLADETGIYRDAKNFFEGLGYKIESKDEIIKLD >Mature_532_residues MKTRFKKKKNWYKSLFFLVLNFSFLSLSGCRVITETSEKAQEDKKISSEIVKNYIENAFVENILQENVFKTTSPKLVLEF ENTNSEFYKNTKEAFDFYQKYQVSLDPTFSLKLVADLQEKNALSSADFAILSAQAGYNKLFDSQAFIILYKNFATGISQI VNKMLLVKYYLVSLGPDLIKDSQIYKDGIAASASFTTKEIFENIDPNSPDFFLIHLLLTKNPVQI*QFESSDQSSISTFS QLKVKDLNSFNNLLRSENITSKLTRKEKDFEKLAKNDSLDTTNMLGYAGILYRQDANLADLSFQFEDLRKQGEVKSGFLD PQSNRI*SSEQIRNFSLINKAKMFPVELRQNFDFKTGKDKVQISDFEIKNDNSLPEAKYKIKAIIPSREGSGNNFFVSVI VEIELGSAKYFYNVDVSWDETKAYYYPEIKPQGEDLPKLSQGIPTTFKDLSKISVKYVNKLAPLYDKIVQGENGKRAYFS LENTP*NTQEQKIKLAYSLYLADETGIYRDAKNFFEGLGYKIESKDEIIKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60613; Mature: 60613
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRFKKKKNWYKSLFFLVLNFSFLSLSGCRVITETSEKAQEDKKISSEIVKNYIENAFV CCCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ENILQENVFKTTSPKLVLEFENTNSEFYKNTKEAFDFYQKYQVSLDPTFSLKLVADLQEK HHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEHHHH NALSSADFAILSAQAGYNKLFDSQAFIILYKNFATGISQIVNKMLLVKYYLVSLGPDLIK CCCCCCCEEEEECCCCHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHC DSQIYKDGIAASASFTTKEIFENIDPNSPDFFLIHLLLTKNPVQIQFESSDQSSISTFSQ CCHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHH LKVKDLNSFNNLLRSENITSKLTRKEKDFEKLAKNDSLDTTNMLGYAGILYRQDANLADL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEECCCCEEEE SFQFEDLRKQGEVKSGFLDPQSNRISSEQIRNFSLINKAKMFPVELRQNFDFKTGKDKVQ EHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEE ISDFEIKNDNSLPEAKYKIKAIIPSREGSGNNFFVSVIVEIELGSAKYFYNVDVSWDETK EEEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEECCEEEEEEEECCCCCCC AYYYPEIKPQGEDLPKLSQGIPTTFKDLSKISVKYVNKLAPLYDKIVQGENGKRAYFSLE EEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC NTPNTQEQKIKLAYSLYLADETGIYRDAKNFFEGLGYKIESKDEIIKLD CCCCCHHHHEEEEEEEEEECCCCCHHHHHHHHHHCCEEECCCCCEEECC >Mature Secondary Structure MKTRFKKKKNWYKSLFFLVLNFSFLSLSGCRVITETSEKAQEDKKISSEIVKNYIENAFV CCCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ENILQENVFKTTSPKLVLEFENTNSEFYKNTKEAFDFYQKYQVSLDPTFSLKLVADLQEK HHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEHHHH NALSSADFAILSAQAGYNKLFDSQAFIILYKNFATGISQIVNKMLLVKYYLVSLGPDLIK CCCCCCCEEEEECCCCHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHC DSQIYKDGIAASASFTTKEIFENIDPNSPDFFLIHLLLTKNPVQIQFESSDQSSISTFSQ CCHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHH LKVKDLNSFNNLLRSENITSKLTRKEKDFEKLAKNDSLDTTNMLGYAGILYRQDANLADL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEECCCCEEEE SFQFEDLRKQGEVKSGFLDPQSNRISSEQIRNFSLINKAKMFPVELRQNFDFKTGKDKVQ EHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEE ISDFEIKNDNSLPEAKYKIKAIIPSREGSGNNFFVSVIVEIELGSAKYFYNVDVSWDETK EEEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEECCEEEEEEEECCCCCCC AYYYPEIKPQGEDLPKLSQGIPTTFKDLSKISVKYVNKLAPLYDKIVQGENGKRAYFSLE EEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC NTPNTQEQKIKLAYSLYLADETGIYRDAKNFFEGLGYKIESKDEIIKLD CCCCCHHHHEEEEEEEEEECCCCCHHHHHHHHHHCCEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA