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The map label for this gene is fliP [C]

Identifier: 53722640

GI number: 53722640

Start: 2191756

End: 2192406

Strand: Reverse

Name: fliP [C]

Synonym: BPSS1617

Alternate gene names: 53722640

Gene position: 2192406-2191756 (Counterclockwise)

Preceding gene: 53722641

Following gene: 53722639

Centisome position: 69.1

GC content: 64.67

Gene sequence:

>651_bases
ATGGTTCAGTTTAACGACATCACCGGCCTCTTGATCGCCGTGCTCGTGATGAGCATGGTGCCGTTCATCGCGATGGTGGT
CACCTCGTACGCGAAGATCGTCGTCGTGCTCGGCCTGCTGCGCAACGCGCTCGGCGTGCAGCAGGTGCCGCCGAACATGG
TGCTCAACGGCATCGCGATTCTCGTGTCGCTGTACATCATGGCGCCGATCGGCTTCGCCGCGCAGCAGCAGCTTCAGGGG
CAGGCGCTGTCGCCGCAGCCGACGCAGGCGATGCTGCAGGCGTTCGGCGCGGCGAAGGAGCCGTTTCGCCGGTTCCTCGC
CGCGCACTCGCGCGAGCGCGAGAAGCGTTTCTTCCTGCGCTCCGCGTCGGTGATCTGGCCGCAGGCCGCGGCCGCGCAAC
TGCGCGAGGACGACCTGATCGTCCTCGCGCCCGCGTTCACGCTCGCGCAGATGACCGATGCGTTCCGCATCGGCTTCATC
CTCTACATCGCGTTCATCATCGTCGATCTCGTGATCGCGAACGTGCTGATGTCGATGGGGATGAACCAGGTGCAGCCGAC
CAACGTCGCGATCCCGTTCAAGCTGATGCTGTTCGTCGTGATGGACGGCTGGTCGACGCTCGTGCACGGCCTCGTGCTGA
CCTATTCCTGA

Upstream 100 bases:

>100_bases
CCGGTGCGGCTCGTCGCATACGGCCAGGCGATCGGCGGCGGCCGCCTCGTCGCGGTGGGCGCGCATCTCGGCGTGCGGAT
CGACCGGATGGCGGGCGACG

Downstream 100 bases:

>100_bases
TGCCCGCTGACCGATTCCCGACTTCGAGGAGGCTCGCCCGATGGAAATCGACGACCTGATCCGGCTCACGTCGCAAGGCA
TGATGCTGTGTCTCTACATC

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MVQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAILVSLYIMAPIGFAAQQQLQG
QALSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRSASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFI
LYIAFIIVDLVIANVLMSMGMNQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTYS

Sequences:

>Translated_216_residues
MVQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAILVSLYIMAPIGFAAQQQLQG
QALSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRSASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFI
LYIAFIIVDLVIANVLMSMGMNQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTYS
>Mature_216_residues
MVQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAILVSLYIMAPIGFAAQQQLQG
QALSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLRSASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFI
LYIAFIIVDLVIANVLMSMGMNQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTYS

Specific function: Important for pathogenicity [H]

COG id: COG4790

COG function: function code U; Type III secretory pathway, component EscR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=209, Percent_Identity=37.799043062201, Blast_Score=140, Evalue=7e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005838
- InterPro:   IPR005773 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 23711; Mature: 23711

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LVSLYIMAPIGFAAQQQLQGQALSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLR
HHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMG
HHHHHCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MNQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTYS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVQFNDITGLLIAVLVMSMVPFIAMVVTSYAKIVVVLGLLRNALGVQQVPPNMVLNGIAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LVSLYIMAPIGFAAQQQLQGQALSPQPTQAMLQAFGAAKEPFRRFLAAHSREREKRFFLR
HHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SASVIWPQAAAAQLREDDLIVLAPAFTLAQMTDAFRIGFILYIAFIIVDLVIANVLMSMG
HHHHHCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MNQVQPTNVAIPFKLMLFVVMDGWSTLVHGLVLTYS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1312532 [H]