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The map label for this gene is yyaA

Identifier: 52788044

GI number: 52788044

Start: 4214852

End: 4215703

Strand: Reverse

Name: yyaA

Synonym: BLi04372

Alternate gene names: 52788044

Gene position: 4215703-4214852 (Counterclockwise)

Preceding gene: 52788045

Following gene: 52788043

Centisome position: 99.84

GC content: 45.07

Gene sequence:

>852_bases
ATGAAGCATTCATTCTCTCGTCTCTTCGGACTTGGCGACAAGGAAGAAGAAGCAGAGATTGCTGAACATGATACGAATAA
AGAAGAAATTCAAGAGATTCCAGTAGGCGATATAATTCCTAACCGTTTTCAGCCGCGCACCATTTTCTCAGAAGAAAAAA
TTAAAGAATTAGCTGCAACCATTCATACACACGGCATTATCCAGCCGATTGTCGTCAGAAAAACAGAGCGGGAAGGCCAA
TATGAACTCATAGCCGGAGAGCGGCGCTGGCGGGCGGTTCAAACGCTCGATTGGGAGAAGGTTCCCGCTATTATTAAGGA
TTTTTCAGATACAGAGACCGCTTCTGTCGCTCTTATCGAAAACCTTCAGAGGGAAGAATTATCTTCGATTGAAGAGGCGC
ATGCTTATGCAAGGCTTTTAGAGCTTCACGATTTGACGCAGGAAGCCCTTGCACAAAGGCTTGGAAAGGGCCAGTCAACA
ATCGCCAATAAGCTCAGACTGTTAAAGCTTCCGGAAGAGGTGCAGGAAGCGATCTTGAAAAAAGAAATTTCAGAGCGCCA
CGCAAGAGCGCTCATACCGTTGAAACAGCCCGACCTTCAGGTCAAGCTGCTGCATGAAGTCATTGAAAAGAGTTTAAATG
TAAAACAAACCGAAGACCGTGTCGTCAAAATGCTTGAGCAGGATAAACGCAAGCCTAAACCAAAGAGAAAAGCGTACAGC
AGGGACGCGAGAATCGCGATGAATACGATTCGCCAGTCCTTATCAATGGTGGAAGACAGCGGCGTCAAACTGAATACGGA
AGAAGAGGAATTTGAAGAATATATTCAGTTTACGATTCGAATACCGAAATAA

Upstream 100 bases:

>100_bases
TAAATTATTCGTTTTCTTCAAATTTCGTGATGTCACAGAAGGAAAATTCATGAGAAAATAGAATTATAAAAATGGCAGTG
TTTAAAGGTGGTGTAGGTAC

Downstream 100 bases:

>100_bases
AAGCTCCCTATAGAGCTTTTATTTTTTTAGGCAAAATATCTATGGGGGAGCGTCTATGGAATATTATCGACAATATCATT
CATTGCTTTTTTCGATTGCT

Product: YyaA

Products: NA

Alternate protein names: Noc

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKHSFSRLFGLGDKEEEAEIAEHDTNKEEIQEIPVGDIIPNRFQPRTIFSEEKIKELAATIHTHGIIQPIVVRKTEREGQ
YELIAGERRWRAVQTLDWEKVPAIIKDFSDTETASVALIENLQREELSSIEEAHAYARLLELHDLTQEALAQRLGKGQST
IANKLRLLKLPEEVQEAILKKEISERHARALIPLKQPDLQVKLLHEVIEKSLNVKQTEDRVVKMLEQDKRKPKPKRKAYS
RDARIAMNTIRQSLSMVEDSGVKLNTEEEEFEEYIQFTIRIPK

Sequences:

>Translated_283_residues
MKHSFSRLFGLGDKEEEAEIAEHDTNKEEIQEIPVGDIIPNRFQPRTIFSEEKIKELAATIHTHGIIQPIVVRKTEREGQ
YELIAGERRWRAVQTLDWEKVPAIIKDFSDTETASVALIENLQREELSSIEEAHAYARLLELHDLTQEALAQRLGKGQST
IANKLRLLKLPEEVQEAILKKEISERHARALIPLKQPDLQVKLLHEVIEKSLNVKQTEDRVVKMLEQDKRKPKPKRKAYS
RDARIAMNTIRQSLSMVEDSGVKLNTEEEEFEEYIQFTIRIPK
>Mature_283_residues
MKHSFSRLFGLGDKEEEAEIAEHDTNKEEIQEIPVGDIIPNRFQPRTIFSEEKIKELAATIHTHGIIQPIVVRKTEREGQ
YELIAGERRWRAVQTLDWEKVPAIIKDFSDTETASVALIENLQREELSSIEEAHAYARLLELHDLTQEALAQRLGKGQST
IANKLRLLKLPEEVQEAILKKEISERHARALIPLKQPDLQVKLLHEVIEKSLNVKQTEDRVVKMLEQDKRKPKPKRKAYS
RDARIAMNTIRQSLSMVEDSGVKLNTEEEEFEEYIQFTIRIPK

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NOC_BACLD (Q65CN4)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_081436.1
- RefSeq:   YP_093873.1
- HSSP:   P07674
- ProteinModelPortal:   Q65CN4
- STRING:   Q65CN4
- EnsemblBacteria:   EBBACT00000056836
- EnsemblBacteria:   EBBACT00000058722
- GeneID:   3029948
- GeneID:   3098812
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi04372
- KEGG:   bli:BL00107
- NMPDR:   fig|279010.5.peg.3901
- eggNOG:   COG1475
- GeneTree:   EBGT00050000001341
- HOGENOM:   HBG641230
- OMA:   RFQPRTI
- ProtClustDB:   CLSK2518292
- BioCyc:   BLIC279010-1:BLI04372-MONOMER
- BioCyc:   BLIC279010:BL00107-MONOMER
- GO:   GO:0005737
- GO:   GO:0009295
- HAMAP:   MF_02015
- InterPro:   IPR004437
- InterPro:   IPR003115
- SMART:   SM00470
- TIGRFAMs:   TIGR00180

Pfam domain/function: PF02195 ParBc; SSF110849 ParBc

EC number: NA

Molecular weight: Translated: 32782; Mature: 32782

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSFSRLFGLGDKEEEAEIAEHDTNKEEIQEIPVGDIIPNRFQPRTIFSEEKIKELAAT
CCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
IHTHGIIQPIVVRKTEREGQYELIAGERRWRAVQTLDWEKVPAIIKDFSDTETASVALIE
HHHHCCHHHHHHEECCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHH
NLQREELSSIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPEEVQEAILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHH
KEISERHARALIPLKQPDLQVKLLHEVIEKSLNVKQTEDRVVKMLEQDKRKPKPKRKAYS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
RDARIAMNTIRQSLSMVEDSGVKLNTEEEEFEEYIQFTIRIPK
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHSFSRLFGLGDKEEEAEIAEHDTNKEEIQEIPVGDIIPNRFQPRTIFSEEKIKELAAT
CCCCHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
IHTHGIIQPIVVRKTEREGQYELIAGERRWRAVQTLDWEKVPAIIKDFSDTETASVALIE
HHHHCCHHHHHHEECCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHH
NLQREELSSIEEAHAYARLLELHDLTQEALAQRLGKGQSTIANKLRLLKLPEEVQEAILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHH
KEISERHARALIPLKQPDLQVKLLHEVIEKSLNVKQTEDRVVKMLEQDKRKPKPKRKAYS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
RDARIAMNTIRQSLSMVEDSGVKLNTEEEEFEEYIQFTIRIPK
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA