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The map label for this gene is yvaO [H]

Identifier: 52787331

GI number: 52787331

Start: 3474527

End: 3474928

Strand: Direct

Name: yvaO [H]

Synonym: BLi03646

Alternate gene names: 52787331

Gene position: 3474527-3474928 (Clockwise)

Preceding gene: 52787324

Following gene: 52787332

Centisome position: 82.28

GC content: 47.76

Gene sequence:

>402_bases
ATGACGAACTTTGGACACCATTTACGACAATTAAGGGAACGGAAAAAACTGACCGTCAATCAACTGGCGATGTATTCCGG
CGTCAGTTCGGCAGGCATTTCGCGAATCGAAAACGGAAAGCGCGGCGTGCCGAAGCCGGCGACGATCAGAAAACTGGCGG
ACGCTTTGAAAGTCCCGTATGAGGAACTGATGGCATCTGCAGGCTATATCAGCGCGTCTACAGTCCAGGAAGCAAGAAGC
AGCTATGATTCCATTTACGACATCGTGTCACAGTACGATTTAGAGGACCTTTCTCTGTTTGACAGCGAAAAGTGGAAGGT
GCTTTCAAAAAAAGACATCGAAAACCTGGACAAATATTTCGACTTTCTCGTGCAGGAAGCAAGCAGCCGAAACAAAAACT
GA

Upstream 100 bases:

>100_bases
GATTTGTTAACTTTTGTCAATACTTTTACCATCCATATGTTTCCTATAGGCAATATTCGTACTAAAATATTTTATAATAA
GAGATTGCGAGGTTTTGGCC

Downstream 100 bases:

>100_bases
ATACTTCTCCGCGGCACACTCTCCTCTCTATCATTTTCGTCTGTTTACGATCCTGCTGTTATTTTATCCCTTATGTTAAC
TTTTGTCAATATTTTTCCTG

Product: YvaO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MTNFGHHLRQLRERKKLTVNQLAMYSGVSSAGISRIENGKRGVPKPATIRKLADALKVPYEELMASAGYISASTVQEARS
SYDSIYDIVSQYDLEDLSLFDSEKWKVLSKKDIENLDKYFDFLVQEASSRNKN

Sequences:

>Translated_133_residues
MTNFGHHLRQLRERKKLTVNQLAMYSGVSSAGISRIENGKRGVPKPATIRKLADALKVPYEELMASAGYISASTVQEARS
SYDSIYDIVSQYDLEDLSLFDSEKWKVLSKKDIENLDKYFDFLVQEASSRNKN
>Mature_132_residues
TNFGHHLRQLRERKKLTVNQLAMYSGVSSAGISRIENGKRGVPKPATIRKLADALKVPYEELMASAGYISASTVQEARSS
YDSIYDIVSQYDLEDLSLFDSEKWKVLSKKDIENLDKYFDFLVQEASSRNKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR016759 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15112; Mature: 14981

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFGHHLRQLRERKKLTVNQLAMYSGVSSAGISRIENGKRGVPKPATIRKLADALKVPY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH
EELMASAGYISASTVQEARSSYDSIYDIVSQYDLEDLSLFDSEKWKVLSKKDIENLDKYF
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
DFLVQEASSRNKN
HHHHHHHHHCCCC
>Mature Secondary Structure 
TNFGHHLRQLRERKKLTVNQLAMYSGVSSAGISRIENGKRGVPKPATIRKLADALKVPY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH
EELMASAGYISASTVQEARSSYDSIYDIVSQYDLEDLSLFDSEKWKVLSKKDIENLDKYF
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
DFLVQEASSRNKN
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]