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The map label for this gene is gerAA [H]

Identifier: 52787179

GI number: 52787179

Start: 3328570

End: 3330012

Strand: Direct

Name: gerAA [H]

Synonym: BLi03488

Alternate gene names: 52787179

Gene position: 3328570-3330012 (Clockwise)

Preceding gene: 52787176

Following gene: 52787180

Centisome position: 78.83

GC content: 46.92

Gene sequence:

>1443_bases
ATGACTCAATCGGAATTCAAGGAACACATCCATGAAAATCTCGCAATGCTCCTTCCCCATCTCGAGCATAACGATGATCT
GATTCAAAATAAAAAAATGCTGAAAAACGGAATCATTTTTTACTTTTTGTACTTTAAAGATTTGAATGATGACAAGAAAA
TCCAGAAGGCTGCGAAATTGCTTGTCTCCGATGACAGCTCCTATTCATTGGAGGATGTCCGGCTCCGCTTAAACAAGCTG
AATGCGGAACCCGTTACAGCAAAAAAGGACGCGATTAACGCAATCTTCAAAGGAAAATGTCTGCTGTTGATCAACGGTTT
GAATACTGTATTTGCACTGCCGACAGCTGAGAAAAAGAAAAGAAGCCTTGGAGAAGTGAATACAGAAAACGTCGTCAGAG
GCCCGAAAGTCGGTTTTATCGAGGATGTCGATACAAATGTGGCTCTAGTCAGGCAGCGTGTCCCGGATAAAGAACTGACC
GTGGAAAAAATCCCGCTCGGCAAGAGCAAGTTTAAAGACGCGACCATTCTCTATATCCAGGGCAAAGCGGACGATTCGAT
CATCAAAGATCTTAAAAAGCGCCTGAAAAAAGTTCAGCTGGATGATATTCAAGATACCGGCGTTCTTGAAGAATTAATCG
AAGATAATAAGTACTCGCCGTTTCCGCAGATCCAGAATACCGAAAGACCTGACAAGGTTTCTTCAGCGCTGTTTAATGGA
CGGATCGCAATTTTTGTTGATTACTCGCCATTTGCCCTGATCGTGCCGGCTTCTTTCGGAATGGTGATGCAGTCCCCGGA
CGATTTTTACGAAAGATGGATCGCCACGACCTTGATCAGATTTCTTCGGTTCAGTTCGATTTTCATCACCCTGTTCCTAT
CGGCGTTTTATATTTCGCTTGTATCTTTTCATCAAGGCATGCTGCCGACGGCTCTCGCTGTTACGATTGCGAGCACGCGC
GAAAATGTGCCGTTTCCGCCGCTCCTTGAAGCGCTGATTATGGAAGTGACGATCGAGCTCTTACGGGAAGCGGGACTGCG
GCTTCCCAATCCGCTAGGCCAGACGATCGGCCTCGTGGGAGGCGTCGTCATCGGCCAGGCGGCGGTCGAAGCAAATATCG
TCAGCTCTGTGATGGTGATCATCGTCAGCATTATCGCCCTTGCTTCATTTACTGTGCCGCAGTACGGCATGGGCCTGTCG
TTTCGCGTGCTTCGTTTTATTTCCATGGTGGCTGCAGCCGTGTTCGGGCTTTACGGGATCATATTGTGCATGCTCGCCAT
CTTCACCCATTTGGCTAGGCAAAGAAGCTTCGGCATCCCGTATTTTAACCCGAACCATTTTTTCAGCTTAAAACATACGG
ATGAAGCCATTATTCGTCTGCCAACAAAAGCTCGGGAGGTGAACCGTAAAAATGGATCCAAAAAATCAGCACGATCGGAT
TAG

Upstream 100 bases:

>100_bases
ATGAAAATTTCGCCAAACACTACTGTAACACAGTATATTGTTTTTTTAACAGGAAAAGATAACCTATACAACTCCAGAAA
CACCAGGGCAGGTGACGATC

Downstream 100 bases:

>100_bases
CACGTATGAAGCCGCTTCGATCATAACCAGCACAATGCTCGGCGCAGGCCTGCTGACGCTGCCCAGGGCGCTGACGCAAA
AAACGCTGTCGCCGGACGGA

Product: GerAA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MTQSEFKEHIHENLAMLLPHLEHNDDLIQNKKMLKNGIIFYFLYFKDLNDDKKIQKAAKLLVSDDSSYSLEDVRLRLNKL
NAEPVTAKKDAINAIFKGKCLLLINGLNTVFALPTAEKKKRSLGEVNTENVVRGPKVGFIEDVDTNVALVRQRVPDKELT
VEKIPLGKSKFKDATILYIQGKADDSIIKDLKKRLKKVQLDDIQDTGVLEELIEDNKYSPFPQIQNTERPDKVSSALFNG
RIAIFVDYSPFALIVPASFGMVMQSPDDFYERWIATTLIRFLRFSSIFITLFLSAFYISLVSFHQGMLPTALAVTIASTR
ENVPFPPLLEALIMEVTIELLREAGLRLPNPLGQTIGLVGGVVIGQAAVEANIVSSVMVIIVSIIALASFTVPQYGMGLS
FRVLRFISMVAAAVFGLYGIILCMLAIFTHLARQRSFGIPYFNPNHFFSLKHTDEAIIRLPTKAREVNRKNGSKKSARSD

Sequences:

>Translated_480_residues
MTQSEFKEHIHENLAMLLPHLEHNDDLIQNKKMLKNGIIFYFLYFKDLNDDKKIQKAAKLLVSDDSSYSLEDVRLRLNKL
NAEPVTAKKDAINAIFKGKCLLLINGLNTVFALPTAEKKKRSLGEVNTENVVRGPKVGFIEDVDTNVALVRQRVPDKELT
VEKIPLGKSKFKDATILYIQGKADDSIIKDLKKRLKKVQLDDIQDTGVLEELIEDNKYSPFPQIQNTERPDKVSSALFNG
RIAIFVDYSPFALIVPASFGMVMQSPDDFYERWIATTLIRFLRFSSIFITLFLSAFYISLVSFHQGMLPTALAVTIASTR
ENVPFPPLLEALIMEVTIELLREAGLRLPNPLGQTIGLVGGVVIGQAAVEANIVSSVMVIIVSIIALASFTVPQYGMGLS
FRVLRFISMVAAAVFGLYGIILCMLAIFTHLARQRSFGIPYFNPNHFFSLKHTDEAIIRLPTKAREVNRKNGSKKSARSD
>Mature_479_residues
TQSEFKEHIHENLAMLLPHLEHNDDLIQNKKMLKNGIIFYFLYFKDLNDDKKIQKAAKLLVSDDSSYSLEDVRLRLNKLN
AEPVTAKKDAINAIFKGKCLLLINGLNTVFALPTAEKKKRSLGEVNTENVVRGPKVGFIEDVDTNVALVRQRVPDKELTV
EKIPLGKSKFKDATILYIQGKADDSIIKDLKKRLKKVQLDDIQDTGVLEELIEDNKYSPFPQIQNTERPDKVSSALFNGR
IAIFVDYSPFALIVPASFGMVMQSPDDFYERWIATTLIRFLRFSSIFITLFLSAFYISLVSFHQGMLPTALAVTIASTRE
NVPFPPLLEALIMEVTIELLREAGLRLPNPLGQTIGLVGGVVIGQAAVEANIVSSVMVIIVSIIALASFTVPQYGMGLSF
RVLRFISMVAAAVFGLYGIILCMLAIFTHLARQRSFGIPYFNPNHFFSLKHTDEAIIRLPTKAREVNRKNGSKKSARSD

Specific function: Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimulate germination in the absence of gerD and gerK gene products (fructose and glucose re

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 53782; Mature: 53650

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSEFKEHIHENLAMLLPHLEHNDDLIQNKKMLKNGIIFYFLYFKDLNDDKKIQKAAKL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHH
LVSDDSSYSLEDVRLRLNKLNAEPVTAKKDAINAIFKGKCLLLINGLNTVFALPTAEKKK
HHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHH
RSLGEVNTENVVRGPKVGFIEDVDTNVALVRQRVPDKELTVEKIPLGKSKFKDATILYIQ
HHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEEE
GKADDSIIKDLKKRLKKVQLDDIQDTGVLEELIEDNKYSPFPQIQNTERPDKVSSALFNG
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCC
RIAIFVDYSPFALIVPASFGMVMQSPDDFYERWIATTLIRFLRFSSIFITLFLSAFYISL
EEEEEEECCCCEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFHQGMLPTALAVTIASTRENVPFPPLLEALIMEVTIELLREAGLRLPNPLGQTIGLVG
HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GVVIGQAAVEANIVSSVMVIIVSIIALASFTVPQYGMGLSFRVLRFISMVAAAVFGLYGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILCMLAIFTHLARQRSFGIPYFNPNHFFSLKHTDEAIIRLPTKAREVNRKNGSKKSARSD
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHEECCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TQSEFKEHIHENLAMLLPHLEHNDDLIQNKKMLKNGIIFYFLYFKDLNDDKKIQKAAKL
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHH
LVSDDSSYSLEDVRLRLNKLNAEPVTAKKDAINAIFKGKCLLLINGLNTVFALPTAEKKK
HHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCEEECCCCHHHH
RSLGEVNTENVVRGPKVGFIEDVDTNVALVRQRVPDKELTVEKIPLGKSKFKDATILYIQ
HHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEEE
GKADDSIIKDLKKRLKKVQLDDIQDTGVLEELIEDNKYSPFPQIQNTERPDKVSSALFNG
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCC
RIAIFVDYSPFALIVPASFGMVMQSPDDFYERWIATTLIRFLRFSSIFITLFLSAFYISL
EEEEEEECCCCEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFHQGMLPTALAVTIASTRENVPFPPLLEALIMEVTIELLREAGLRLPNPLGQTIGLVG
HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GVVIGQAAVEANIVSSVMVIIVSIIALASFTVPQYGMGLSFRVLRFISMVAAAVFGLYGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILCMLAIFTHLARQRSFGIPYFNPNHFFSLKHTDEAIIRLPTKAREVNRKNGSKKSARSD
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHEECCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2998952; 9639930; 9384377; 3110007; 3923430 [H]