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The map label for this gene is yuxN [H]

Identifier: 52787176

GI number: 52787176

Start: 3325877

End: 3326761

Strand: Direct

Name: yuxN [H]

Synonym: BLi03485

Alternate gene names: 52787176

Gene position: 3325877-3326761 (Clockwise)

Preceding gene: 52787174

Following gene: 52787179

Centisome position: 78.76

GC content: 45.31

Gene sequence:

>885_bases
ATGAAACAAAAAGAGAAAGTCATTATTGAAACAGCCATCAAACTTTTCGCTAAAAAAGGATACAGTTCTACTTCAGTTCA
AGAGATTGCAAAAGAGTGCCAAATGTCAAAAGGCGCTTTCTACATTTATTTTAAATCAAAAGAAGCGCTCCTCCTTTCAG
TCCTTCACTACTACTATGAAAGAATCTTTACCCGAATCCAGAAAATCAAAACGGAGCATGACAATCCGCGCGATGTGTAC
CGGATGCAGCTCGTCGTTTTTTTCGAAAACATTTTGGAGCATAAAGAGTTTATCACGATGCAGTTTAATGAGCGGTCGAT
GCCGATCAATGAAGAAATTGAGGCGTTTGCGAAAAAAATGCGGAGAACCACGCTCAGGCTGCACATCGAAAACATCCAGA
ACATTTACGGCAAAGACATTGAACCGTACAGCGCCGAACTGTGCTTTATGATCAACGGAATGAGCGATGTCTACCTTGAG
CTGATGATTTTGCTGCACCATTCGTTCGACCTGCAGTCTCTCGCCGACCACATGCTGAACCGCCTCGACGATTTGGCGAA
GGGGATGATCAAGCGCAATGACCAGCCGCTGATCCCATTCGAAAAAGCAGACGAGTGGTTCGGCCCATTTTACACATTTG
ATCCGCTGAAGGACGCCCTGCTCAATGAAATGCGCGTCAAAGCGAACAAGCAGTACAACGGCGCTCCTCCTGCAGACCTT
GCCGAAAGCCTGGATATTCTGGAGAAAGAGCTGAGAAAAGAAAAACGCAAAAACGCCATTATCAAAGGCATGATAGCCAA
CTTGAAGGAATATCCCGCGATTCGAAAAGAAACGGACAAACTCGCCGAATTGCTCAAAAAAGACATGCACCATCCGCACG
GATGA

Upstream 100 bases:

>100_bases
ATCTAGTTAAAAATATAACGGAGCAAAAAAAGTGACCCGCCAGTCACCCCGGTCCGCCGAAAGCCGCTTTTGGGTTCGAT
CTTTCAGGAAGGTGAAAGCT

Downstream 100 bases:

>100_bases
TCCGCAAAACAAAACCGGCTGCAATGCATGCAGCCGGTTTGTTGATTATGCTTTCGGTTTCACCATTTCTTCAGGTTTAA
CAACTTCGTCGAACTGCTCC

Product: YuxN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKQKEKVIIETAIKLFAKKGYSSTSVQEIAKECQMSKGAFYIYFKSKEALLLSVLHYYYERIFTRIQKIKTEHDNPRDVY
RMQLVVFFENILEHKEFITMQFNERSMPINEEIEAFAKKMRRTTLRLHIENIQNIYGKDIEPYSAELCFMINGMSDVYLE
LMILLHHSFDLQSLADHMLNRLDDLAKGMIKRNDQPLIPFEKADEWFGPFYTFDPLKDALLNEMRVKANKQYNGAPPADL
AESLDILEKELRKEKRKNAIIKGMIANLKEYPAIRKETDKLAELLKKDMHHPHG

Sequences:

>Translated_294_residues
MKQKEKVIIETAIKLFAKKGYSSTSVQEIAKECQMSKGAFYIYFKSKEALLLSVLHYYYERIFTRIQKIKTEHDNPRDVY
RMQLVVFFENILEHKEFITMQFNERSMPINEEIEAFAKKMRRTTLRLHIENIQNIYGKDIEPYSAELCFMINGMSDVYLE
LMILLHHSFDLQSLADHMLNRLDDLAKGMIKRNDQPLIPFEKADEWFGPFYTFDPLKDALLNEMRVKANKQYNGAPPADL
AESLDILEKELRKEKRKNAIIKGMIANLKEYPAIRKETDKLAELLKKDMHHPHG
>Mature_294_residues
MKQKEKVIIETAIKLFAKKGYSSTSVQEIAKECQMSKGAFYIYFKSKEALLLSVLHYYYERIFTRIQKIKTEHDNPRDVY
RMQLVVFFENILEHKEFITMQFNERSMPINEEIEAFAKKMRRTTLRLHIENIQNIYGKDIEPYSAELCFMINGMSDVYLE
LMILLHHSFDLQSLADHMLNRLDDLAKGMIKRNDQPLIPFEKADEWFGPFYTFDPLKDALLNEMRVKANKQYNGAPPADL
AESLDILEKELRKEKRKNAIIKGMIANLKEYPAIRKETDKLAELLKKDMHHPHG

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 34660; Mature: 34660

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKEKVIIETAIKLFAKKGYSSTSVQEIAKECQMSKGAFYIYFKSKEALLLSVLHYYYE
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH
RIFTRIQKIKTEHDNPRDVYRMQLVVFFENILEHKEFITMQFNERSMPINEEIEAFAKKM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH
RRTTLRLHIENIQNIYGKDIEPYSAELCFMINGMSDVYLELMILLHHSFDLQSLADHMLN
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCHHHHHHHHHHHHHCCCCHHHHHHHHHH
RLDDLAKGMIKRNDQPLIPFEKADEWFGPFYTFDPLKDALLNEMRVKANKQYNGAPPADL
HHHHHHHHHHHCCCCCCCCHHHCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AESLDILEKELRKEKRKNAIIKGMIANLKEYPAIRKETDKLAELLKKDMHHPHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKQKEKVIIETAIKLFAKKGYSSTSVQEIAKECQMSKGAFYIYFKSKEALLLSVLHYYYE
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH
RIFTRIQKIKTEHDNPRDVYRMQLVVFFENILEHKEFITMQFNERSMPINEEIEAFAKKM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH
RRTTLRLHIENIQNIYGKDIEPYSAELCFMINGMSDVYLELMILLHHSFDLQSLADHMLN
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCHHHHHHHHHHHHHCCCCHHHHHHHHHH
RLDDLAKGMIKRNDQPLIPFEKADEWFGPFYTFDPLKDALLNEMRVKANKQYNGAPPADL
HHHHHHHHHHHCCCCCCCCHHHCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AESLDILEKELRKEKRKNAIIKGMIANLKEYPAIRKETDKLAELLKKDMHHPHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9353931; 9384377; 3923430 [H]