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The map label for this gene is gerAB [H]

Identifier: 52787180

GI number: 52787180

Start: 3329981

End: 3331081

Strand: Direct

Name: gerAB [H]

Synonym: BLi03489

Alternate gene names: 52787180

Gene position: 3329981-3331081 (Clockwise)

Preceding gene: 52787179

Following gene: 52787181

Centisome position: 78.86

GC content: 46.59

Gene sequence:

>1101_bases
ATGGATCCAAAAAATCAGCACGATCGGATTAGCACGTATGAAGCCGCTTCGATCATAACCAGCACAATGCTCGGCGCAGG
CCTGCTGACGCTGCCCAGGGCGCTGACGCAAAAAACGCTGTCGCCGGACGGATGGATCGTATTAATCTTTGAGGGGCTTG
TCTTTTTTCTCATTATCTACATCAATGCAAAAATCGTTAAAAAACACAACGTCCTGTCTTTTTTTGATTACACAAGAGAA
GGCTGCGGCTTTATAATCGGGAATATTCTCAACCTGTTAATCGTTTTATACTTCATGGGCGTGGCCAGCTTTGAAGCCAG
GGCGATGGCTGAAATGGCAAAGTTTTTCCTTCTTCAGTTCACGCCGATGAGCGTGACGATTTTCGCTTTTATCGTCTGTG
CAATTTATTTGGTTGTCGGGGGTATCAGCGATATGTCAAAGATATTCCCGTTCTTCCTGTCCGTTACCATTGTCATTCTT
CTGATCGTCTGCGGACTGAGCCTGAATATGTTTCAGCTGAACCATTTGCGGCCGGTTCTCGGCCTTGGTTTGGAGCCGGT
CAGCAGAGCTTTGACGGTCGTTTCCATTTCATTTTTAGGGGTGGAGCTGATGATGTTTCTGCCGAAATACGTCAAAAACA
AAGAAAAGCTTTTTAAGGCATCGGCGATTGGATTTGGGATACCGCTCTTCTTATATATCCTCACCTTTGCGGTCGTTGTC
GGGGCGCTGACCGCGACTGAGGTCATGACGTTGACATGGCCGACGATCTCGTTGTTTCAGTCTTTTGAGATAAGAGGGAT
TTTCATCGAAAGGTTCGAATCGTTTTTGCTCGTCATTTGGACGATCCAGTTTTTCACAACGTTTGTCGTCTATACGTACT
TTGCCGCTTCAGGACTTGAAAACGTATTCGGATGGCCTGTGAAAAAAAACGTCCTCTTCATCGGCGTTGTCATCTATCTA
GCATCCCTTGTCCCGCGGGACGCCAACCAGGTCAGCGCCTTCAGCGACTACCTTGGATATATCTTTATCGTTGTCTTCTG
TGCACTTCCGCTTATGATCTTTTTGCTCGTGTCCATCAAAAGGAGGTTTACTTCTTCATGA

Upstream 100 bases:

>100_bases
GGCATCCCGTATTTTAACCCGAACCATTTTTTCAGCTTAAAACATACGGATGAAGCCATTATTCGTCTGCCAACAAAAGC
TCGGGAGGTGAACCGTAAAA

Downstream 100 bases:

>100_bases
AAAAAAAGGGAATGTTAGCAGCCCTTTCTCTGCTTCTCCTTTTAACAGGCTGCTGGGACAGCAGGCAGATCGAAAAGCTT
AGCATCGCCATCGGCCTTGC

Product: GerAB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MDPKNQHDRISTYEAASIITSTMLGAGLLTLPRALTQKTLSPDGWIVLIFEGLVFFLIIYINAKIVKKHNVLSFFDYTRE
GCGFIIGNILNLLIVLYFMGVASFEARAMAEMAKFFLLQFTPMSVTIFAFIVCAIYLVVGGISDMSKIFPFFLSVTIVIL
LIVCGLSLNMFQLNHLRPVLGLGLEPVSRALTVVSISFLGVELMMFLPKYVKNKEKLFKASAIGFGIPLFLYILTFAVVV
GALTATEVMTLTWPTISLFQSFEIRGIFIERFESFLLVIWTIQFFTTFVVYTYFAASGLENVFGWPVKKNVLFIGVVIYL
ASLVPRDANQVSAFSDYLGYIFIVVFCALPLMIFLLVSIKRRFTSS

Sequences:

>Translated_366_residues
MDPKNQHDRISTYEAASIITSTMLGAGLLTLPRALTQKTLSPDGWIVLIFEGLVFFLIIYINAKIVKKHNVLSFFDYTRE
GCGFIIGNILNLLIVLYFMGVASFEARAMAEMAKFFLLQFTPMSVTIFAFIVCAIYLVVGGISDMSKIFPFFLSVTIVIL
LIVCGLSLNMFQLNHLRPVLGLGLEPVSRALTVVSISFLGVELMMFLPKYVKNKEKLFKASAIGFGIPLFLYILTFAVVV
GALTATEVMTLTWPTISLFQSFEIRGIFIERFESFLLVIWTIQFFTTFVVYTYFAASGLENVFGWPVKKNVLFIGVVIYL
ASLVPRDANQVSAFSDYLGYIFIVVFCALPLMIFLLVSIKRRFTSS
>Mature_366_residues
MDPKNQHDRISTYEAASIITSTMLGAGLLTLPRALTQKTLSPDGWIVLIFEGLVFFLIIYINAKIVKKHNVLSFFDYTRE
GCGFIIGNILNLLIVLYFMGVASFEARAMAEMAKFFLLQFTPMSVTIFAFIVCAIYLVVGGISDMSKIFPFFLSVTIVIL
LIVCGLSLNMFQLNHLRPVLGLGLEPVSRALTVVSISFLGVELMMFLPKYVKNKEKLFKASAIGFGIPLFLYILTFAVVV
GALTATEVMTLTWPTISLFQSFEIRGIFIERFESFLLVIWTIQFFTTFVVYTYFAASGLENVFGWPVKKNVLFIGVVIYL
ASLVPRDANQVSAFSDYLGYIFIVVFCALPLMIFLLVSIKRRFTSS

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter. Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41062; Mature: 41062

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPKNQHDRISTYEAASIITSTMLGAGLLTLPRALTQKTLSPDGWIVLIFEGLVFFLIIY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
INAKIVKKHNVLSFFDYTREGCGFIIGNILNLLIVLYFMGVASFEARAMAEMAKFFLLQF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPMSVTIFAFIVCAIYLVVGGISDMSKIFPFFLSVTIVILLIVCGLSLNMFQLNHLRPVL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GLGLEPVSRALTVVSISFLGVELMMFLPKYVKNKEKLFKASAIGFGIPLFLYILTFAVVV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHH
GALTATEVMTLTWPTISLFQSFEIRGIFIERFESFLLVIWTIQFFTTFVVYTYFAASGLE
HHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVFGWPVKKNVLFIGVVIYLASLVPRDANQVSAFSDYLGYIFIVVFCALPLMIFLLVSIK
HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFTSS
HHHCCC
>Mature Secondary Structure
MDPKNQHDRISTYEAASIITSTMLGAGLLTLPRALTQKTLSPDGWIVLIFEGLVFFLIIY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
INAKIVKKHNVLSFFDYTREGCGFIIGNILNLLIVLYFMGVASFEARAMAEMAKFFLLQF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPMSVTIFAFIVCAIYLVVGGISDMSKIFPFFLSVTIVILLIVCGLSLNMFQLNHLRPVL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GLGLEPVSRALTVVSISFLGVELMMFLPKYVKNKEKLFKASAIGFGIPLFLYILTFAVVV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHH
GALTATEVMTLTWPTISLFQSFEIRGIFIERFESFLLVIWTIQFFTTFVVYTYFAASGLE
HHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVFGWPVKKNVLFIGVVIYLASLVPRDANQVSAFSDYLGYIFIVVFCALPLMIFLLVSIK
HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFTSS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3110007; 9639930; 9384377; 8382989 [H]