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The map label for this gene is ydgD [H]

Identifier: 52786254

GI number: 52786254

Start: 2441084

End: 2441431

Strand: Direct

Name: ydgD [H]

Synonym: BLi02515

Alternate gene names: 52786254

Gene position: 2441084-2441431 (Clockwise)

Preceding gene: 52786253

Following gene: 52786255

Centisome position: 57.81

GC content: 52.59

Gene sequence:

>348_bases
GTGGCATTTATTTTCTTAAAAGCAGGGCTGGCGGCATTTATGCTGACCGGAGGCGTAATCAAGGTGCTGCACGTTCCTTT
TCAAGTCGAACATTGGCGCCATTATGAATATCCGCTGTGGTTTCTTTCTGTTACAGGATGTCTCGAAATCGCCGGAGCGC
TTGGCATGATCGGCGGAATTTGGAATGTGCATCTGGCTGTCGGTTCGGGGCTGTTATTCTCCCTGCTTATGACAGGAGCC
ATCCATGCCCACCTGGTCCGGGCGCGGCAGCCTTTTTTCACGGCCATCCCTGCCGCGGTTTGTTTGATTTGCGCCCTAAG
CATGATCATCGTCGAGCTGTACTTCTGA

Upstream 100 bases:

>100_bases
ACGGATCAAAGGACCCCTCAAGTCTCGCAAAACAAATCACGGATCTTTTGATCCACGGAATGCTCGTAAATCCGCAGCAT
CCAGAAACGGAGTGAACACA

Downstream 100 bases:

>100_bases
TCCCGATGCCGATGGGTTGAAAACTTCGCTCCTTTGTATTACGGTCAAAGTAAGAAAAAAAGGAGTGAGGCTTATGAAAA
AAAGGACGCTCGGACATTCC

Product: YdgD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MAFIFLKAGLAAFMLTGGVIKVLHVPFQVEHWRHYEYPLWFLSVTGCLEIAGALGMIGGIWNVHLAVGSGLLFSLLMTGA
IHAHLVRARQPFFTAIPAAVCLICALSMIIVELYF

Sequences:

>Translated_115_residues
MAFIFLKAGLAAFMLTGGVIKVLHVPFQVEHWRHYEYPLWFLSVTGCLEIAGALGMIGGIWNVHLAVGSGLLFSLLMTGA
IHAHLVRARQPFFTAIPAAVCLICALSMIIVELYF
>Mature_114_residues
AFIFLKAGLAAFMLTGGVIKVLHVPFQVEHWRHYEYPLWFLSVTGCLEIAGALGMIGGIWNVHLAVGSGLLFSLLMTGAI
HAHLVRARQPFFTAIPAAVCLICALSMIIVELYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 12601; Mature: 12470

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFIFLKAGLAAFMLTGGVIKVLHVPFQVEHWRHYEYPLWFLSVTGCLEIAGALGMIGGI
CEEEEEHHHHHHHHHHCCHHEEHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
WNVHLAVGSGLLFSLLMTGAIHAHLVRARQPFFTAIPAAVCLICALSMIIVELYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFIFLKAGLAAFMLTGGVIKVLHVPFQVEHWRHYEYPLWFLSVTGCLEIAGALGMIGGI
EEEEEHHHHHHHHHHCCHHEEHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
WNVHLAVGSGLLFSLLMTGAIHAHLVRARQPFFTAIPAAVCLICALSMIIVELYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]