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The map label for this gene is ypiA [H]

Identifier: 52786138

GI number: 52786138

Start: 2337127

End: 2338401

Strand: Reverse

Name: ypiA [H]

Synonym: BLi02394

Alternate gene names: 52786138

Gene position: 2338401-2337127 (Counterclockwise)

Preceding gene: 52786139

Following gene: 52786137

Centisome position: 55.38

GC content: 48.31

Gene sequence:

>1275_bases
TTGAATACTTCTATTCAAGAAGCCATAAAATTAGTTGAAGCAGGCCACCCGGAAAGCGGATTGAAAAAACTTGCTGATAT
CGAGTCTGACCTTCATGATGAAGACAAAGCCATAGTAGCCCAGCTGTATTACGAATGGGGAATTGTCGATAAGGCTATCG
CCATCGTGACTGACCTCCATGAACTGTATCCGGATGAAACAGAACTGACATGCTTTTATGCCGAACTCCTCATCGAAACC
GATCAGGAAGAAAAAGCGCTCAGCGTGCTCGAAACGATTCCGGAAACAGACGAGGCGTACCCGCAGTGCCTGCTTTTAAT
GGCTGATCTCTATCAGATGCAGGGTCTGTTTGAAGTCAGCGAGCAAAAGCTGTTAAAGGCGCAAGCCATTTTGCCGGATG
AGCCGGTTATCGATTTTGCTTTGGGAGAGCTGTATTTTACTCAGGGAGCTTACGGCAAAGCGGTCCGTCAATTCAAAAAA
GCGGCCGAAGAAGAAGCCGTCATCGGCGGCGTCAATGTGTACCAAAGGCTGGCGGAATCATTAAGTTCATCCGGAGCGTT
TGAAGAAGCGCTTGAATGGTATGAAAAAGCCGTCAAGGAGAACCCCGAGCCCAACACACTGTTCGGCTTTGGTTTTACGG
CACTGAAAGCGGGGTATCCTAAAACTGCGATTAAACAGCTGACAGAGCTGAAGGAAATGGATCCCGCTTATTCTTCGCTT
TACAAGCCTCTGGCCAACAGCTTTGAAACAGAAGGGCTTTATGAGGAAGCATTCGAAACGGCAAAAGAAGGAATCCGTGT
CGATGAATTCAACAAAGAGCTTTATCTTTCTGCTGCAAAAGCAGCCTTAAAAACGAAAAGGCATTCGGAAGCGAAGGAGC
TGCTTCGTGAAGCGCTGGCGCTGGATCCCGGATATCTGGAAGCCGTTCATACACTGCTTGCCCTGTTTCTTGAAGAAGAA
GACGATGAGAGCATCATTGAACTCGTTCGGGAAGTGCGCAAATACGGAGAGGATGATCCGAAGTTCAGCTGGCATCTGGC
ATCGGCGTTCGCCCGGACCGAAGCGTACGACAAAGCCCGCGAGGAATATGAGAACGCATTTTTGCACTATCGGGATGACG
CCGATTTCCTTTACGAATATTCCATGTTTCTGCTTGAAGAAGGACGGCGGAAAGAAGCGCTGCCTCTGCTGAAAAAACTG
GCAGAGCTCGACCCGGCAAACGAGGAAGTCCAGGAGACGATTTTCAGAATCGAAGATGAAAATTCCTTTGAATAA

Upstream 100 bases:

>100_bases
GCCGGAAACCGCCGCGTGAATTATGATAGTAAGTAACTCACCGCGATATGCCGGCTGATACGGCCGGTGATGAATTGACG
AAAGAAAGGGACGTTTAGAT

Downstream 100 bases:

>100_bases
GCAGGATATGATCGGTTTGTGTGGAATTTATAAAGTAATACACAAGATGCGATAGAGGAGGGAATAACATGCAGACCCCT
GTTTCTGTCAATGAAAAAAA

Product: YpiA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MNTSIQEAIKLVEAGHPESGLKKLADIESDLHDEDKAIVAQLYYEWGIVDKAIAIVTDLHELYPDETELTCFYAELLIET
DQEEKALSVLETIPETDEAYPQCLLLMADLYQMQGLFEVSEQKLLKAQAILPDEPVIDFALGELYFTQGAYGKAVRQFKK
AAEEEAVIGGVNVYQRLAESLSSSGAFEEALEWYEKAVKENPEPNTLFGFGFTALKAGYPKTAIKQLTELKEMDPAYSSL
YKPLANSFETEGLYEEAFETAKEGIRVDEFNKELYLSAAKAALKTKRHSEAKELLREALALDPGYLEAVHTLLALFLEEE
DDESIIELVREVRKYGEDDPKFSWHLASAFARTEAYDKAREEYENAFLHYRDDADFLYEYSMFLLEEGRRKEALPLLKKL
AELDPANEEVQETIFRIEDENSFE

Sequences:

>Translated_424_residues
MNTSIQEAIKLVEAGHPESGLKKLADIESDLHDEDKAIVAQLYYEWGIVDKAIAIVTDLHELYPDETELTCFYAELLIET
DQEEKALSVLETIPETDEAYPQCLLLMADLYQMQGLFEVSEQKLLKAQAILPDEPVIDFALGELYFTQGAYGKAVRQFKK
AAEEEAVIGGVNVYQRLAESLSSSGAFEEALEWYEKAVKENPEPNTLFGFGFTALKAGYPKTAIKQLTELKEMDPAYSSL
YKPLANSFETEGLYEEAFETAKEGIRVDEFNKELYLSAAKAALKTKRHSEAKELLREALALDPGYLEAVHTLLALFLEEE
DDESIIELVREVRKYGEDDPKFSWHLASAFARTEAYDKAREEYENAFLHYRDDADFLYEYSMFLLEEGRRKEALPLLKKL
AELDPANEEVQETIFRIEDENSFE
>Mature_424_residues
MNTSIQEAIKLVEAGHPESGLKKLADIESDLHDEDKAIVAQLYYEWGIVDKAIAIVTDLHELYPDETELTCFYAELLIET
DQEEKALSVLETIPETDEAYPQCLLLMADLYQMQGLFEVSEQKLLKAQAILPDEPVIDFALGELYFTQGAYGKAVRQFKK
AAEEEAVIGGVNVYQRLAESLSSSGAFEEALEWYEKAVKENPEPNTLFGFGFTALKAGYPKTAIKQLTELKEMDPAYSSL
YKPLANSFETEGLYEEAFETAKEGIRVDEFNKELYLSAAKAALKTKRHSEAKELLREALALDPGYLEAVHTLLALFLEEE
DDESIIELVREVRKYGEDDPKFSWHLASAFARTEAYDKAREEYENAFLHYRDDADFLYEYSMFLLEEGRRKEALPLLKKL
AELDPANEEVQETIFRIEDENSFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 48287; Mature: 48287

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSIQEAIKLVEAGHPESGLKKLADIESDLHDEDKAIVAQLYYEWGIVDKAIAIVTDLH
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELYPDETELTCFYAELLIETDQEEKALSVLETIPETDEAYPQCLLLMADLYQMQGLFEVS
HHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EQKLLKAQAILPDEPVIDFALGELYFTQGAYGKAVRQFKKAAEEEAVIGGVNVYQRLAES
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSSSGAFEEALEWYEKAVKENPEPNTLFGFGFTALKAGYPKTAIKQLTELKEMDPAYSSL
HHCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
YKPLANSFETEGLYEEAFETAKEGIRVDEFNKELYLSAAKAALKTKRHSEAKELLREALA
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPGYLEAVHTLLALFLEEEDDESIIELVREVRKYGEDDPKFSWHLASAFARTEAYDKAR
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
EEYENAFLHYRDDADFLYEYSMFLLEEGRRKEALPLLKKLAELDPANEEVQETIFRIEDE
HHHHHHHEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
NSFE
CCCC
>Mature Secondary Structure
MNTSIQEAIKLVEAGHPESGLKKLADIESDLHDEDKAIVAQLYYEWGIVDKAIAIVTDLH
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELYPDETELTCFYAELLIETDQEEKALSVLETIPETDEAYPQCLLLMADLYQMQGLFEVS
HHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EQKLLKAQAILPDEPVIDFALGELYFTQGAYGKAVRQFKKAAEEEAVIGGVNVYQRLAES
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSSSGAFEEALEWYEKAVKENPEPNTLFGFGFTALKAGYPKTAIKQLTELKEMDPAYSSL
HHCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHCCHHHHHH
YKPLANSFETEGLYEEAFETAKEGIRVDEFNKELYLSAAKAALKTKRHSEAKELLREALA
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPGYLEAVHTLLALFLEEEDDESIIELVREVRKYGEDDPKFSWHLASAFARTEAYDKAR
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
EEYENAFLHYRDDADFLYEYSMFLLEEGRRKEALPLLKKLAELDPANEEVQETIFRIEDE
HHHHHHHEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
NSFE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]