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The map label for this gene is ypiB

Identifier: 52786137

GI number: 52786137

Start: 2336519

End: 2337058

Strand: Reverse

Name: ypiB

Synonym: BLi02393

Alternate gene names: NA

Gene position: 2337058-2336519 (Counterclockwise)

Preceding gene: 52786138

Following gene: 52786136

Centisome position: 55.35

GC content: 42.22

Gene sequence:

>540_bases
ATGCAGACCCCTGTTTCTGTCAATGAAAAAAAAGATTTTATCCGCTGGTTTCTCAACCATTATCAGCTGAAACGAAGAGA
GTGTGTATGGATTCTGAATTATTTAATGAGCCATGACTCGCTGATGGAAAAAGTGCATTTTGTCGAGCAGGCCGAATTTT
GTCCGAGGGGCATTATCATGTCTACCCACTGCGTTGAGGAAGTGCCTTTTCGTTTTTATAAAGAAAATGTCATGACGACC
GATGCAGAAAAATCATTTCATGATATCAGGCTGAATAAGCAGCAGGATCTCTTTATCCAGCTGAACTTCCGCTCAGCCTA
TAATTCTCCGGAATATGCGGCTGTACTCGAAGCCAATCCGCATATTCCGAAAGACCTATATGAAAATGAAAAAGATAAAA
TTGTCGCTGAACAGATTTTGGAGCATTCCATTGCCACTTTTCAGAGACAAAAGCTGCTGCGGGAAATCGACGAAGCGCTT
GACCGCCAGGATAAAGAAAGCTTCGAAAAACTAGCTAAACAACTGAGCCAGCTGCGATAA

Upstream 100 bases:

>100_bases
TCAGAATCGAAGATGAAAATTCCTTTGAATAAGCAGGATATGATCGGTTTGTGTGGAATTTATAAAGTAATACACAAGAT
GCGATAGAGGAGGGAATAAC

Downstream 100 bases:

>100_bases
TCCGCTGCCAATCAAGCCTTGCCGAAAGCAAGGCTTGTTCAGCTCTGAGAAAGCGCTGTCAAAACGGGGAGGACGAAAGC
CGTGAAATGGAATACGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIMSTHCVEEVPFRFYKENVMTT
DAEKSFHDIRLNKQQDLFIQLNFRSAYNSPEYAAVLEANPHIPKDLYENEKDKIVAEQILEHSIATFQRQKLLREIDEAL
DRQDKESFEKLAKQLSQLR

Sequences:

>Translated_179_residues
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIMSTHCVEEVPFRFYKENVMTT
DAEKSFHDIRLNKQQDLFIQLNFRSAYNSPEYAAVLEANPHIPKDLYENEKDKIVAEQILEHSIATFQRQKLLREIDEAL
DRQDKESFEKLAKQLSQLR
>Mature_179_residues
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIMSTHCVEEVPFRFYKENVMTT
DAEKSFHDIRLNKQQDLFIQLNFRSAYNSPEYAAVLEANPHIPKDLYENEKDKIVAEQILEHSIATFQRQKLLREIDEAL
DRQDKESFEKLAKQLSQLR

Specific function: Unknown

COG id: COG5582

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0302 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2764_BACLD (Q65I41)

Other databases:

- EMBL:   CP000002
- EMBL:   AE017333
- RefSeq:   YP_079556.1
- RefSeq:   YP_091966.1
- ProteinModelPortal:   Q65I41
- STRING:   Q65I41
- EnsemblBacteria:   EBBACT00000056123
- EnsemblBacteria:   EBBACT00000061295
- GeneID:   3029175
- GeneID:   3101510
- GenomeReviews:   AE017333_GR
- GenomeReviews:   CP000002_GR
- KEGG:   bld:BLi02393
- KEGG:   bli:BL02764
- NMPDR:   fig|279010.5.peg.243
- eggNOG:   COG5582
- GeneTree:   EBGT00050000000902
- HOGENOM:   HBG313418
- OMA:   QLKRREC
- ProtClustDB:   PRK03636
- BioCyc:   BLIC279010-1:BLI02393-MONOMER
- BioCyc:   BLIC279010:BL02764-MONOMER
- HAMAP:   MF_00760
- InterPro:   IPR011188
- InterPro:   IPR014957
- InterPro:   IPR014963
- PIRSF:   PIRSF007165
- SMART:   SM00914

Pfam domain/function: PF08858 IDEAL; PF08864 UPF0302

EC number: NA

Molecular weight: Translated: 21482; Mature: 21482

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
STHCVEEVPFRFYKENVMTTDAEKSFHDIRLNKQQDLFIQLNFRSAYNSPEYAAVLEANP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCC
HIPKDLYENEKDKIVAEQILEHSIATFQRQKLLREIDEALDRQDKESFEKLAKQLSQLR
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
STHCVEEVPFRFYKENVMTTDAEKSFHDIRLNKQQDLFIQLNFRSAYNSPEYAAVLEANP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCC
HIPKDLYENEKDKIVAEQILEHSIATFQRQKLLREIDEALDRQDKESFEKLAKQLSQLR
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA