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The map label for this gene is yprB [H]

Identifier: 52786101

GI number: 52786101

Start: 2303805

End: 2305205

Strand: Reverse

Name: yprB [H]

Synonym: BLi02357

Alternate gene names: 52786101

Gene position: 2305205-2303805 (Counterclockwise)

Preceding gene: 52786102

Following gene: 52786100

Centisome position: 54.59

GC content: 49.82

Gene sequence:

>1401_bases
ATGCCCTTCCTGCATAGGAGTGAGCGGCGGCGATCAGACAAAAAACAATGCTCTGCGCCTTTTAAAAGGCTGGAAAGGTT
GAGCGGAATGTCTTTAAAACGAAAACTTAATCGCTATAAGCATCACCTGGGAAATCAAGCGAAAGAAGAAAAAACGGAAC
CTCCCGCAGATAAGCTGACTTCCTTGTCCGTCAGTTTTGAAAAAGAATGGGCCGAACTCGGTGTTAAACCATATGTGTTT
GAGGAATGCTATTGCCTGATCAGGGAAGTCGTTTACCCGTTGACTCATGTTCATGGTCATTACGCGTTTTCTGAGCTGCA
TGAGACGGTTAGGCGATGGAACAACAGCGCCGTTTCCCATTCGCTTTCAAGCAAAGGGTACACACCGAGCCAGCTCTTCT
TCTTTGATACGGAAACGACCGGTCTCGGAGGCGGGGCCGGCAATGCGATCTTTTTGCTCGGCCATGCAAGGGTGTATGAC
GACCGCGTAGTCGTCAAACAGCATCTGCTGCCAAAGCCGGGGTACGAAGCCGCCCTCTATCACAGCTTTCTGAGTGAAGT
CGATATTCAGTCTCTTGTCACCTATAACGGCAAAGCGTTCGACTGGCCCCAGGTGAAAACGAGGCACACGCTGATCCGCG
ACAGGGTCCCAAAGCTTCCGGATTTCGGCCACTTTGACCTGCTGCACGGATCCCGCCGCCTTTGGAAGCATAAATTTGAC
CGCGTTTCCTTAGGGACGGTGGAAAAGGAAGAGCTGGGCGTTGTAAGAACTGAAGATACGCCGGGCTATCTGGCGCCGAT
GATGTATTTTCATTTTTTAAAGGAGGAACGGCCGGAAATCATTGAAGGCGTTTTGCGCCATAATGAGCTTGACGTGCTTT
CTTTAATCACTCTTTACATCCATTTATCGAAGAAAATCCTCACTCCGGAGCAGACAGCGGAAGCAAACGAAAAGTACGCG
ATGGCAAAATGGCTCCTCGCCAACCGGGAGACAGAGCTTGCGACAGCGCAATTGCAAGAGCTTGAAAAAAAACCTTTTGA
ACATTCTGAACGCGCATCATTCGATTTATCCATGCAGTATAAAAAACAAGGCATGCTAAAAGAAGCCGCAGCCCTTTGGC
TGAAGCTCCAAAATGGAGAAGACGGAAAAACCGCCTGGCGCGCAGGCATCGAACTTGCCAAATACTTTGAACATCGAAAG
CGGGATATTCGGGCCGCTCTTGAGGTAGCGGAAAACCTGCTGGAGCAGCACGGTTCACAAAAGTTTGAGCTGACCGAAAA
AGAAATGGCCGGCCTCTTGAGAAGGCGCGAGCGGCTGGAAAGGAAATACGGACGAAATATTCCCCGGGCAAGCGCAGAAA
ACGACGATCTTCGAAAGCCAAACATTTCAAGCACGTTATGA

Upstream 100 bases:

>100_bases
ATCCCGGCGGAGTGGGTCTTTCACAAAAAGTGTATGAACAAATGCCCGAGATCATCAGTGAAGCGCATCGGCTGATTTCA
AGATGTCCGTGTGAGTCAGG

Downstream 100 bases:

>100_bases
ATTGTAGAAACCGATCGCTTCTTGTAAAATAGCGTTAGAATCGTTTGAAGGGAGCGTCGATATGTATAAGGGGCTGTTTT
ATCTGTTTTTTGTCGTCGTA

Product: YprB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MPFLHRSERRRSDKKQCSAPFKRLERLSGMSLKRKLNRYKHHLGNQAKEEKTEPPADKLTSLSVSFEKEWAELGVKPYVF
EECYCLIREVVYPLTHVHGHYAFSELHETVRRWNNSAVSHSLSSKGYTPSQLFFFDTETTGLGGGAGNAIFLLGHARVYD
DRVVVKQHLLPKPGYEAALYHSFLSEVDIQSLVTYNGKAFDWPQVKTRHTLIRDRVPKLPDFGHFDLLHGSRRLWKHKFD
RVSLGTVEKEELGVVRTEDTPGYLAPMMYFHFLKEERPEIIEGVLRHNELDVLSLITLYIHLSKKILTPEQTAEANEKYA
MAKWLLANRETELATAQLQELEKKPFEHSERASFDLSMQYKKQGMLKEAAALWLKLQNGEDGKTAWRAGIELAKYFEHRK
RDIRAALEVAENLLEQHGSQKFELTEKEMAGLLRRRERLERKYGRNIPRASAENDDLRKPNISSTL

Sequences:

>Translated_466_residues
MPFLHRSERRRSDKKQCSAPFKRLERLSGMSLKRKLNRYKHHLGNQAKEEKTEPPADKLTSLSVSFEKEWAELGVKPYVF
EECYCLIREVVYPLTHVHGHYAFSELHETVRRWNNSAVSHSLSSKGYTPSQLFFFDTETTGLGGGAGNAIFLLGHARVYD
DRVVVKQHLLPKPGYEAALYHSFLSEVDIQSLVTYNGKAFDWPQVKTRHTLIRDRVPKLPDFGHFDLLHGSRRLWKHKFD
RVSLGTVEKEELGVVRTEDTPGYLAPMMYFHFLKEERPEIIEGVLRHNELDVLSLITLYIHLSKKILTPEQTAEANEKYA
MAKWLLANRETELATAQLQELEKKPFEHSERASFDLSMQYKKQGMLKEAAALWLKLQNGEDGKTAWRAGIELAKYFEHRK
RDIRAALEVAENLLEQHGSQKFELTEKEMAGLLRRRERLERKYGRNIPRASAENDDLRKPNISSTL
>Mature_465_residues
PFLHRSERRRSDKKQCSAPFKRLERLSGMSLKRKLNRYKHHLGNQAKEEKTEPPADKLTSLSVSFEKEWAELGVKPYVFE
ECYCLIREVVYPLTHVHGHYAFSELHETVRRWNNSAVSHSLSSKGYTPSQLFFFDTETTGLGGGAGNAIFLLGHARVYDD
RVVVKQHLLPKPGYEAALYHSFLSEVDIQSLVTYNGKAFDWPQVKTRHTLIRDRVPKLPDFGHFDLLHGSRRLWKHKFDR
VSLGTVEKEELGVVRTEDTPGYLAPMMYFHFLKEERPEIIEGVLRHNELDVLSLITLYIHLSKKILTPEQTAEANEKYAM
AKWLLANRETELATAQLQELEKKPFEHSERASFDLSMQYKKQGMLKEAAALWLKLQNGEDGKTAWRAGIELAKYFEHRKR
DIRAALEVAENLLEQHGSQKFELTEKEMAGLLRRRERLERKYGRNIPRASAENDDLRKPNISSTL

Specific function: Unknown

COG id: COG3359

COG function: function code L; Predicted exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54041; Mature: 53910

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PFLHRSERRRSDKKQCSAPFKRLERLSGMSLKRKLNRYKHHLGNQAKEEKTEPPADKLT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHH
SLSVSFEKEWAELGVKPYVFEECYCLIREVVYPLTHVHGHYAFSELHETVRRWNNSAVSH
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SLSSKGYTPSQLFFFDTETTGLGGGAGNAIFLLGHARVYDDRVVVKQHLLPKPGYEAALY
HHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHCCHHHHHHHCCCCCCHHHHHH
HSFLSEVDIQSLVTYNGKAFDWPQVKTRHTLIRDRVPKLPDFGHFDLLHGSRRLWKHKFD
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHC
RVSLGTVEKEELGVVRTEDTPGYLAPMMYFHFLKEERPEIIEGVLRHNELDVLSLITLYI
CCCCCCCCHHHCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
HLSKKILTPEQTAEANEKYAMAKWLLANRETELATAQLQELEKKPFEHSERASFDLSMQY
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEHHH
KKQGMLKEAAALWLKLQNGEDGKTAWRAGIELAKYFEHRKRDIRAALEVAENLLEQHGSQ
HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KFELTEKEMAGLLRRRERLERKYGRNIPRASAENDDLRKPNISSTL
CEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 3145906 [H]