Click here to switch to the map view.

The map label for this gene is cotD1 [H]

Identifier: 52786100

GI number: 52786100

Start: 2303294

End: 2303563

Strand: Reverse

Name: cotD1 [H]

Synonym: BLi02356

Alternate gene names: 52786100

Gene position: 2303563-2303294 (Counterclockwise)

Preceding gene: 52786101

Following gene: 52786099

Centisome position: 54.55

GC content: 52.22

Gene sequence:

>270_bases
ATGCACTGTAAACCGCATGTAATGGCGCCGATTGTTCATCCTACTCAATGCTGCTACAACCATACGCACAGCAAAACCGT
CGTACCGCACATTCACCCGCAGCACACAACGAATGTCAACCATCAGCATTTTCAGCATGTTCATTACTACCCGCAAACTC
AATCAGCTGTCAACAAGGCGTCACATCAGCACTTCGTGAGCCCTGGAGCAGGAATGATGCCTGGGCCTGGAGGGATGCCG
GGACCTGGAATGGGCATGGGGCCTTACTAA

Upstream 100 bases:

>100_bases
TATGGCTTACTTTTAAAATAGGTTTTTATATTAGTACATGTTTACCCCCTGCTTCATAGTTTAATAGTGTATATAGAAGC
TTAAAGAAAGGGGAATTTTC

Downstream 100 bases:

>100_bases
AAAGGTTTTTCGGAAGTTTTGTCAGGATGAACGAGCGCCGGATTGAACGTGACTAACAGAATATTTTTAAAAAAATGGGG
CGGAATACGGCCCCATTTTT

Product: CotD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MHCKPHVMAPIVHPTQCCYNHTHSKTVVPHIHPQHTTNVNHQHFQHVHYYPQTQSAVNKASHQHFVSPGAGMMPGPGGMP
GPGMGMGPY

Sequences:

>Translated_89_residues
MHCKPHVMAPIVHPTQCCYNHTHSKTVVPHIHPQHTTNVNHQHFQHVHYYPQTQSAVNKASHQHFVSPGAGMMPGPGGMP
GPGMGMGPY
>Mature_89_residues
MHCKPHVMAPIVHPTQCCYNHTHSKTVVPHIHPQHTTNVNHQHFQHVHYYPQTQSAVNKASHQHFVSPGAGMMPGPGGMP
GPGMGMGPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020108
- ProDom:   PD057197 [H]

Pfam domain/function: PF11122 Spore-coat_CotD [H]

EC number: NA

Molecular weight: Translated: 9788; Mature: 9788

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
11.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
11.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCKPHVMAPIVHPTQCCYNHTHSKTVVPHIHPQHTTNVNHQHFQHVHYYPQTQSAVNKA
CCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCHHHCEEECCCCCHHHHHHHH
SHQHFVSPGAGMMPGPGGMPGPGMGMGPY
HHHEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHCKPHVMAPIVHPTQCCYNHTHSKTVVPHIHPQHTTNVNHQHFQHVHYYPQTQSAVNKA
CCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCHHHCEEECCCCCHHHHHHHH
SHQHFVSPGAGMMPGPGGMPGPGMGMGPY
HHHEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2821284; 8760912; 9384377; 1691789 [H]