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The map label for this gene is yplQ [H]

Identifier: 52786061

GI number: 52786061

Start: 2268368

End: 2269009

Strand: Direct

Name: yplQ [H]

Synonym: BLi02317

Alternate gene names: 52786061

Gene position: 2268368-2269009 (Clockwise)

Preceding gene: 52786060

Following gene: 52786073

Centisome position: 53.72

GC content: 46.73

Gene sequence:

>642_bases
ATGTACACGATTAAAGAAGAAATTGCTAATGCAATAACCCATGGACTCGGCGTCCTCCTGTCAATACCTGCCATCGTATT
TTTGGTGATATTTGCGATCCGCTACGGAAGTCCGGTTGATGTTGTCAGCTTTTCAATTTTCGGCGCTTCCATGCTGTTCC
TGTATTTAAGTTCGACCCTTCTGCACAGCATTCAGCACCAAAAAACAAAAGATATTCTGGAGATCATCGATCACTCAGCC
ATCTACGTACTGATTGCAGGGACATACACACCGCTGCTCCTCGGACCTTTGAAAGGCGCGCTAGGCTATACGATGCTTGC
TGTCGTTTGGGGGCTTGCGATTGGCGGGGTTGTGTTTAAAATCTTTTTTGTGAAACGGTTTATCGTTGTCAGCACACTGG
TATATCTTGTGATGGGCTGGATGGCGATCATTGCGATCAAGCCGCTTTATACGGCCTTGACCGGAGAAGGGTTCGCCCTG
CTGCTTTTAGGGGGAATCTTGTATTCTGTCGGAACCATCTTTTATTTATGGAGAAAGATTCCATATCATCATGCGATATG
GCACACTTTCGTGCTCGGCGGCAGCGCCTCAATGTTTTTCTGCGTGCTTTTCTACGTGGCAAAAGTGCCGTTTGTATCGT
AA

Upstream 100 bases:

>100_bases
GGGCCGCGGAAGAGCCGGGACAAAAATCACGCTTGAAGGCCTCCGCTTTTTAAGCTCTTTAAAGCATCACATTATTCAAG
ATTAGAAAGGGTGTCTTGGT

Downstream 100 bases:

>100_bases
ACGGCGAAAACCAGGCTTCCATTATGGGAGCCTGGTTTTTTTATGCCCGAAGCTGTTTGTTTTCAGTCATGACGTATGCC
GGGTGGATCGTCAAATCGAT

Product: YplQ

Products: NA

Alternate protein names: Hemolysin III homolog [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MYTIKEEIANAITHGLGVLLSIPAIVFLVIFAIRYGSPVDVVSFSIFGASMLFLYLSSTLLHSIQHQKTKDILEIIDHSA
IYVLIAGTYTPLLLGPLKGALGYTMLAVVWGLAIGGVVFKIFFVKRFIVVSTLVYLVMGWMAIIAIKPLYTALTGEGFAL
LLLGGILYSVGTIFYLWRKIPYHHAIWHTFVLGGSASMFFCVLFYVAKVPFVS

Sequences:

>Translated_213_residues
MYTIKEEIANAITHGLGVLLSIPAIVFLVIFAIRYGSPVDVVSFSIFGASMLFLYLSSTLLHSIQHQKTKDILEIIDHSA
IYVLIAGTYTPLLLGPLKGALGYTMLAVVWGLAIGGVVFKIFFVKRFIVVSTLVYLVMGWMAIIAIKPLYTALTGEGFAL
LLLGGILYSVGTIFYLWRKIPYHHAIWHTFVLGGSASMFFCVLFYVAKVPFVS
>Mature_213_residues
MYTIKEEIANAITHGLGVLLSIPAIVFLVIFAIRYGSPVDVVSFSIFGASMLFLYLSSTLLHSIQHQKTKDILEIIDHSA
IYVLIAGTYTPLLLGPLKGALGYTMLAVVWGLAIGGVVFKIFFVKRFIVVSTLVYLVMGWMAIIAIKPLYTALTGEGFAL
LLLGGILYSVGTIFYLWRKIPYHHAIWHTFVLGGSASMFFCVLFYVAKVPFVS

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=210, Percent_Identity=29.5238095238095, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI52630445, Length=214, Percent_Identity=27.1028037383178, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI154759277, Length=234, Percent_Identity=26.4957264957265, Blast_Score=71, Evalue=6e-13,
Organism=Escherichia coli, GI1789266, Length=208, Percent_Identity=43.2692307692308, Blast_Score=183, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI71996356, Length=213, Percent_Identity=29.5774647887324, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24640324, Length=222, Percent_Identity=28.3783783783784, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23477; Mature: 23477

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTIKEEIANAITHGLGVLLSIPAIVFLVIFAIRYGSPVDVVSFSIFGASMLFLYLSSTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LHSIQHQKTKDILEIIDHSAIYVLIAGTYTPLLLGPLKGALGYTMLAVVWGLAIGGVVFK
HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFVKRFIVVSTLVYLVMGWMAIIAIKPLYTALTGEGFALLLLGGILYSVGTIFYLWRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
PYHHAIWHTFVLGGSASMFFCVLFYVAKVPFVS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYTIKEEIANAITHGLGVLLSIPAIVFLVIFAIRYGSPVDVVSFSIFGASMLFLYLSSTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LHSIQHQKTKDILEIIDHSAIYVLIAGTYTPLLLGPLKGALGYTMLAVVWGLAIGGVVFK
HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFVKRFIVVSTLVYLVMGWMAIIAIKPLYTALTGEGFALLLLGGILYSVGTIFYLWRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
PYHHAIWHTFVLGGSASMFFCVLFYVAKVPFVS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]