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The map label for this gene is dctB [H]

Identifier: 52785872

GI number: 52785872

Start: 2066381

End: 2067382

Strand: Reverse

Name: dctB [H]

Synonym: BLi02120

Alternate gene names: 52785872

Gene position: 2067382-2066381 (Counterclockwise)

Preceding gene: 52785874

Following gene: 52785871

Centisome position: 48.96

GC content: 41.42

Gene sequence:

>1002_bases
ATGAGAAATATGCTATCCGTGTTTTTTGTATGCGCTTTAATCTTTGGAATGCTTACGGGGTGTAAAAGCAGCGATGTAAT
AGGCGTCGATAAAACCGTAACGTTACGGCTTGCTCACAACCATAATGAGGAACACCCCATCCACAAGTCTTTACTCAAAT
TTTCAAAAGACGTAGAAAAGAAAACCAATGGCACCGTTAAAGTGCAAGTGTATCCAAATGCTCAGCTCGGTTCAGAACGT
GAAGTGATTGAATTGACACAGACCGGGGCTGTCGATCTGGCTAAAGTAAGTGCAAGCGCTTTAGAAAGTTTTTCAGAGGT
CTACTCCATCTTCAGCTTGCCTTATTTATTTGACAGCAAACATCATTTCTATGAAGCCATGGACAGTGATATTGCAAAAG
AAATGTATGATACAACGAAAAACATAGGGTTTATTGGATTAACCTACTATGATGCGGGATTACGGAACTTTTACACAAAG
AACAAACCGATTATGCACCCAAATGACCTTAAAGGTTTAAAAATTCGGGTGCAGCCGAGTGCTACAGCGATTCGAATGGT
GGAACTCATGGGTGGAGCACCTACTCCAATGGCTTATGGAGAAGTATATACAGCATTGCAGTCAAGTGTAATCGATGGCA
CCGAAAACAACGAAATGGCTTTAACAAGCAGCAATCACGGGGAGGTGGCAAAAGAATATTCATACTCAGAACATGCAATC
GTTCCGGATATTTTGATCATGAATTTGGACAAAAAGGATCAATTAAGCGAAGAACAGCAGAATGCGGTGATCGAAGCGGC
GAAAGAGTCTACTGAGTATCACAAAATCGTTTGGGCTGAAGAAACTGAAAATGCGGTTGAGAAAGCAAAGGAAATGGGAG
TGAAGTTCCACAAGCCAGACAAGACTCCATTCCGGGATGCGGTAAGCCCGCTTCATGATGAGTTTGCCAAAAAAGAATTG
ATCGGAAAATACTATAGGGAAATTCGAAAGCTAAAAAAGTAA

Upstream 100 bases:

>100_bases
TGTAAACGCTACCAAAAAAATATGGCGATGAAAGAAAACATGAATCGCAATCAATCATTGGTTAGAAAGCAACGGTTATG
AGATTCAAGGAGGGTAGTTC

Downstream 100 bases:

>100_bases
AATGACTCTGGATGAATGAGCGACTCGAATATTTTTCGATAAGGGAGGGGTGTATATGCTAGCTTTAAAAAAAGCAGTGA
ATAAAACGATTGAATGTTTG

Product: DctB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MRNMLSVFFVCALIFGMLTGCKSSDVIGVDKTVTLRLAHNHNEEHPIHKSLLKFSKDVEKKTNGTVKVQVYPNAQLGSER
EVIELTQTGAVDLAKVSASALESFSEVYSIFSLPYLFDSKHHFYEAMDSDIAKEMYDTTKNIGFIGLTYYDAGLRNFYTK
NKPIMHPNDLKGLKIRVQPSATAIRMVELMGGAPTPMAYGEVYTALQSSVIDGTENNEMALTSSNHGEVAKEYSYSEHAI
VPDILIMNLDKKDQLSEEQQNAVIEAAKESTEYHKIVWAEETENAVEKAKEMGVKFHKPDKTPFRDAVSPLHDEFAKKEL
IGKYYREIRKLKK

Sequences:

>Translated_333_residues
MRNMLSVFFVCALIFGMLTGCKSSDVIGVDKTVTLRLAHNHNEEHPIHKSLLKFSKDVEKKTNGTVKVQVYPNAQLGSER
EVIELTQTGAVDLAKVSASALESFSEVYSIFSLPYLFDSKHHFYEAMDSDIAKEMYDTTKNIGFIGLTYYDAGLRNFYTK
NKPIMHPNDLKGLKIRVQPSATAIRMVELMGGAPTPMAYGEVYTALQSSVIDGTENNEMALTSSNHGEVAKEYSYSEHAI
VPDILIMNLDKKDQLSEEQQNAVIEAAKESTEYHKIVWAEETENAVEKAKEMGVKFHKPDKTPFRDAVSPLHDEFAKKEL
IGKYYREIRKLKK
>Mature_333_residues
MRNMLSVFFVCALIFGMLTGCKSSDVIGVDKTVTLRLAHNHNEEHPIHKSLLKFSKDVEKKTNGTVKVQVYPNAQLGSER
EVIELTQTGAVDLAKVSASALESFSEVYSIFSLPYLFDSKHHFYEAMDSDIAKEMYDTTKNIGFIGLTYYDAGLRNFYTK
NKPIMHPNDLKGLKIRVQPSATAIRMVELMGGAPTPMAYGEVYTALQSSVIDGTENNEMALTSSNHGEVAKEYSYSEHAI
VPDILIMNLDKKDQLSEEQQNAVIEAAKESTEYHKIVWAEETENAVEKAKEMGVKFHKPDKTPFRDAVSPLHDEFAKKEL
IGKYYREIRKLKK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=286, Percent_Identity=28.6713286713287, Blast_Score=148, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37531; Mature: 37531

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNMLSVFFVCALIFGMLTGCKSSDVIGVDKTVTLRLAHNHNEEHPIHKSLLKFSKDVEK
CCHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH
KTNGTVKVQVYPNAQLGSEREVIELTQTGAVDLAKVSASALESFSEVYSIFSLPYLFDSK
HCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCH
HHFYEAMDSDIAKEMYDTTKNIGFIGLTYYDAGLRNFYTKNKPIMHPNDLKGLKIRVQPS
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC
ATAIRMVELMGGAPTPMAYGEVYTALQSSVIDGTENNEMALTSSNHGEVAKEYSYSEHAI
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCCCCCCCC
VPDILIMNLDKKDQLSEEQQNAVIEAAKESTEYHKIVWAEETENAVEKAKEMGVKFHKPD
CCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEECCC
KTPFRDAVSPLHDEFAKKELIGKYYREIRKLKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNMLSVFFVCALIFGMLTGCKSSDVIGVDKTVTLRLAHNHNEEHPIHKSLLKFSKDVEK
CCHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH
KTNGTVKVQVYPNAQLGSEREVIELTQTGAVDLAKVSASALESFSEVYSIFSLPYLFDSK
HCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCH
HHFYEAMDSDIAKEMYDTTKNIGFIGLTYYDAGLRNFYTKNKPIMHPNDLKGLKIRVQPS
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC
ATAIRMVELMGGAPTPMAYGEVYTALQSSVIDGTENNEMALTSSNHGEVAKEYSYSEHAI
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCCCCCCCC
VPDILIMNLDKKDQLSEEQQNAVIEAAKESTEYHKIVWAEETENAVEKAKEMGVKFHKPD
CCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEECCC
KTPFRDAVSPLHDEFAKKELIGKYYREIRKLKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]