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The map label for this gene is yiaM [C]

Identifier: 52785871

GI number: 52785871

Start: 2065810

End: 2066325

Strand: Reverse

Name: yiaM [C]

Synonym: BLi02119

Alternate gene names: 52785871

Gene position: 2066325-2065810 (Counterclockwise)

Preceding gene: 52785872

Following gene: 52785870

Centisome position: 48.93

GC content: 37.79

Gene sequence:

>516_bases
ATGCTAGCTTTAAAAAAAGCAGTGAATAAAACGATTGAATGTTTGACTTGCACACTAATGGCCATCATGGTTTTGGTTGC
GATATGGCAAGTATTTACGCGCTATGTACTGAATTCTCCCAGTACGTTTTCAGAAGAATTTTTACGCTATTCACTGATAT
GGATTTCTATGTTAGGCGGTGCCTATGCATTTTGGAAAAAAAAGCACTTGGCGATTGAATTTATCGTTCGAAAACTTCCA
ATAAAAGCAGCTGTTTTCGTTCATACTTTCATTCAGATTCTTTTGATTGCTTTTGCTCTGATTGTGTTGGTGTTAGGAGG
TTCGAAAGCAGTGATCACCACAATGGAGCAATCTTCAGCAGCATTAGGGATACCGGTGGGATTTGTTTATCTATCACTTC
CTGTTGCAGGCATACTCATCATTGGATACAGCTTGGCCGGTTTATATGAATCTTTACATGAATTCAATTCAAAACAAAAG
TCAGGTGATGATGTAAAAAAAGCAGCAAAGATGTGA

Upstream 100 bases:

>100_bases
TTGATCGGAAAATACTATAGGGAAATTCGAAAGCTAAAAAAGTAAAATGACTCTGGATGAATGAGCGACTCGAATATTTT
TCGATAAGGGAGGGGTGTAT

Downstream 100 bases:

>100_bases
CTGAGGCTTTTTGAAAACTAAAAAAGAGGTGAAATGATATGGCCATAGCAGCCGGTCTCATTTTATCGGCGGTATTCTTC
ATATTGTTGTTTCTCGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MLALKKAVNKTIECLTCTLMAIMVLVAIWQVFTRYVLNSPSTFSEEFLRYSLIWISMLGGAYAFWKKKHLAIEFIVRKLP
IKAAVFVHTFIQILLIAFALIVLVLGGSKAVITTMEQSSAALGIPVGFVYLSLPVAGILIIGYSLAGLYESLHEFNSKQK
SGDDVKKAAKM

Sequences:

>Translated_171_residues
MLALKKAVNKTIECLTCTLMAIMVLVAIWQVFTRYVLNSPSTFSEEFLRYSLIWISMLGGAYAFWKKKHLAIEFIVRKLP
IKAAVFVHTFIQILLIAFALIVLVLGGSKAVITTMEQSSAALGIPVGFVYLSLPVAGILIIGYSLAGLYESLHEFNSKQK
SGDDVKKAAKM
>Mature_171_residues
MLALKKAVNKTIECLTCTLMAIMVLVAIWQVFTRYVLNSPSTFSEEFLRYSLIWISMLGGAYAFWKKKHLAIEFIVRKLP
IKAAVFVHTFIQILLIAFALIVLVLGGSKAVITTMEQSSAALGIPVGFVYLSLPVAGILIIGYSLAGLYESLHEFNSKQK
SGDDVKKAAKM

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter small permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007387 [H]

Pfam domain/function: PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 18877; Mature: 18877

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALKKAVNKTIECLTCTLMAIMVLVAIWQVFTRYVLNSPSTFSEEFLRYSLIWISMLGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AYAFWKKKHLAIEFIVRKLPIKAAVFVHTFIQILLIAFALIVLVLGGSKAVITTMEQSSA
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCC
ALGIPVGFVYLSLPVAGILIIGYSLAGLYESLHEFNSKQKSGDDVKKAAKM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure
MLALKKAVNKTIECLTCTLMAIMVLVAIWQVFTRYVLNSPSTFSEEFLRYSLIWISMLGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AYAFWKKKHLAIEFIVRKLPIKAAVFVHTFIQILLIAFALIVLVLGGSKAVITTMEQSSA
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCC
ALGIPVGFVYLSLPVAGILIIGYSLAGLYESLHEFNSKQKSGDDVKKAAKM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]