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The map label for this gene is yoaU1 [H]

Identifier: 52785072

GI number: 52785072

Start: 1307058

End: 1307450

Strand: Reverse

Name: yoaU1 [H]

Synonym: BLi01304

Alternate gene names: 52785072

Gene position: 1307450-1307058 (Counterclockwise)

Preceding gene: 52785073

Following gene: 52785069

Centisome position: 30.96

GC content: 42.24

Gene sequence:

>393_bases
ATGACGGCCGTGATTCCTGAGCAATATCACCACTTAAAAGACGCACCGTTCATTGATCTGAAAAAATATCAAAATGAATT
GATTTTTTGTAAAGGCGGGCACGAAATCGCGGTATCTCAAATCTTTCAAAAACACCGCCTCGAGTTAAAAGAAAACCTGA
CTGTGCAAAACGCGGAAACATTGGTCAATATGGTTCATAACAATTTGGGAATCGGCTTGATATCAAGCTTCTCGCTTTCC
TCCGTGTCCCATCGGTTGATCAAAAAAGACATCTCTCCTCAAATTATCCGCGAAGTCGGCATGATAACACCCTCATTTGA
AGAAGCAACACCTGCGGCTGCAGAGTTTATGAAAATGATCATAGAGTCGGAAACTGTCCGGGCATTTTCGTAA

Upstream 100 bases:

>100_bases
CTTGAGGGAACCTCCGACCAAATTAAGCAATGGGTCGAAACTCGCATGGTTGATTTAGGAATCGTCGCCTCTCCCTTTGA
CGGATTCGAAAGCCAACCGG

Downstream 100 bases:

>100_bases
AAAAGAAAAACGCCTCAGCACCAATCAATGGGCTGAGGCGTTTTTTTAAAATGCTCATCAGTCATGAAAATTCGTTCCGT
CCGTCGTTTCTTTAACAATT

Product: YoaU1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTAVIPEQYHHLKDAPFIDLKKYQNELIFCKGGHEIAVSQIFQKHRLELKENLTVQNAETLVNMVHNNLGIGLISSFSLS
SVSHRLIKKDISPQIIREVGMITPSFEEATPAAAEFMKMIIESETVRAFS

Sequences:

>Translated_130_residues
MTAVIPEQYHHLKDAPFIDLKKYQNELIFCKGGHEIAVSQIFQKHRLELKENLTVQNAETLVNMVHNNLGIGLISSFSLS
SVSHRLIKKDISPQIIREVGMITPSFEEATPAAAEFMKMIIESETVRAFS
>Mature_129_residues
TAVIPEQYHHLKDAPFIDLKKYQNELIFCKGGHEIAVSQIFQKHRLELKENLTVQNAETLVNMVHNNLGIGLISSFSLSS
VSHRLIKKDISPQIIREVGMITPSFEEATPAAAEFMKMIIESETVRAFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 14680; Mature: 14549

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVIPEQYHHLKDAPFIDLKKYQNELIFCKGGHEIAVSQIFQKHRLELKENLTVQNAET
CCCCCCHHHHHCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
LVNMVHNNLGIGLISSFSLSSVSHRLIKKDISPQIIREVGMITPSFEEATPAAAEFMKMI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IESETVRAFS
HHHHHHHCCC
>Mature Secondary Structure 
TAVIPEQYHHLKDAPFIDLKKYQNELIFCKGGHEIAVSQIFQKHRLELKENLTVQNAET
CCCCCHHHHHCCCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
LVNMVHNNLGIGLISSFSLSSVSHRLIKKDISPQIIREVGMITPSFEEATPAAAEFMKMI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IESETVRAFS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]