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The map label for this gene is yfjP [H]

Identifier: 52784630

GI number: 52784630

Start: 850235

End: 851098

Strand: Direct

Name: yfjP [H]

Synonym: BLi00831

Alternate gene names: 52784630

Gene position: 850235-851098 (Clockwise)

Preceding gene: 52784627

Following gene: 52784631

Centisome position: 20.14

GC content: 47.8

Gene sequence:

>864_bases
ATGTGGAAGGAAACTGTAAGCGTAACACCGCCTTATCATTTTGACCGCGTGTTGGACAGGCTTTCGCTTGATCCGCTCAA
TGCGGTCAACCTCGACAAAAGGGAGGTCAAGCTGCCGCTCCGCAATCAAAACAAAGAGCCTCGGGTTGTCGCTGTGCAGG
CGACGGGAACTGCTGAAGCCCCGGCGTTTGCCGTCAGCGGAATAGACGATCGAGATGACATGATAAAAGAAGTGAAACGG
ATCTTCAGATGGGAAGAAAGTCTTCAGCCTGTACTGGATCACTTTTCACAATCAAGCCTATCATCGATTTTTGAGGAGCA
TGCCGGAACGCCGCTGGTGCTCGATTTTCATTTGTATCATTGCCTGATGAAATGCATTATCCACCAGCAGCTGAACCTGT
CTTTTGCTTATACGCTCACGGAGCGGTTCGTTCACACTTTTGGAGAGCAAAAGGACGGGGTCTGGTTTTATCCGCTTCCC
GAAACGATTGCACAGCTTGACTACAACGATCTGCGCGAACTTCAATTCAGCATGCGAAAGGCTGAATATGTCATCGATAC
ATCAAGGATGATCGCAGACGGCCGTTTAGATCTTGATGAGCTTGATCAATTATCAGATGAAGATATTATGGAAAAGCTGG
TGAAAATCAGAGGAATCGGCCCGTGGACCGTCCAAAACGTTCTGCTGTTCGGACTCGGCCGTCCCAATCTGTTTCCGGCA
GCCGATATCGGCATCCAAAATGCCATCAAACGCCATTTTGGCTTAAACGATAAACCGACAAAAGAACAAATGCTTGAAAT
GAGCAAAGAATGGCACCCTTATTTAAGCTATGCTTCCTTGTATTTATGGAGGAGCATCGAGTAG

Upstream 100 bases:

>100_bases
GTGCTGTGATTCATTCGATGAAAAATAAAATGTTGTTCTTTTTTAAGAGAATTTGAAACATGGTATACTGTGGACAAAGA
AGAAAAAGGGATGGGAAGCG

Downstream 100 bases:

>100_bases
AAATGGAGAGAACACCAGTGAAACGTGACAAAAAAGGATCATCAGCAGAATTAAAAGTCGGACAGCAATTTCCGCTGACG
ATCAAGCGCCTCGGCATCAA

Product: YfjP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MWKETVSVTPPYHFDRVLDRLSLDPLNAVNLDKREVKLPLRNQNKEPRVVAVQATGTAEAPAFAVSGIDDRDDMIKEVKR
IFRWEESLQPVLDHFSQSSLSSIFEEHAGTPLVLDFHLYHCLMKCIIHQQLNLSFAYTLTERFVHTFGEQKDGVWFYPLP
ETIAQLDYNDLRELQFSMRKAEYVIDTSRMIADGRLDLDELDQLSDEDIMEKLVKIRGIGPWTVQNVLLFGLGRPNLFPA
ADIGIQNAIKRHFGLNDKPTKEQMLEMSKEWHPYLSYASLYLWRSIE

Sequences:

>Translated_287_residues
MWKETVSVTPPYHFDRVLDRLSLDPLNAVNLDKREVKLPLRNQNKEPRVVAVQATGTAEAPAFAVSGIDDRDDMIKEVKR
IFRWEESLQPVLDHFSQSSLSSIFEEHAGTPLVLDFHLYHCLMKCIIHQQLNLSFAYTLTERFVHTFGEQKDGVWFYPLP
ETIAQLDYNDLRELQFSMRKAEYVIDTSRMIADGRLDLDELDQLSDEDIMEKLVKIRGIGPWTVQNVLLFGLGRPNLFPA
ADIGIQNAIKRHFGLNDKPTKEQMLEMSKEWHPYLSYASLYLWRSIE
>Mature_287_residues
MWKETVSVTPPYHFDRVLDRLSLDPLNAVNLDKREVKLPLRNQNKEPRVVAVQATGTAEAPAFAVSGIDDRDDMIKEVKR
IFRWEESLQPVLDHFSQSSLSSIFEEHAGTPLVLDFHLYHCLMKCIIHQQLNLSFAYTLTERFVHTFGEQKDGVWFYPLP
ETIAQLDYNDLRELQFSMRKAEYVIDTSRMIADGRLDLDELDQLSDEDIMEKLVKIRGIGPWTVQNVLLFGLGRPNLFPA
ADIGIQNAIKRHFGLNDKPTKEQMLEMSKEWHPYLSYASLYLWRSIE

Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, 3-methylguanine, 7-methylguanine, O2- methylthymine, and O2-methylcytosine from the damaged DNA polymer formed by alkylation lesions [H]

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alkylbase DNA glycosidase alkA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: =3.2.2.21 [H]

Molecular weight: Translated: 33310; Mature: 33310

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKETVSVTPPYHFDRVLDRLSLDPLNAVNLDKREVKLPLRNQNKEPRVVAVQATGTAEA
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEEECCCCCC
PAFAVSGIDDRDDMIKEVKRIFRWEESLQPVLDHFSQSSLSSIFEEHAGTPLVLDFHLYH
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
CLMKCIIHQQLNLSFAYTLTERFVHTFGEQKDGVWFYPLPETIAQLDYNDLRELQFSMRK
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHH
AEYVIDTSRMIADGRLDLDELDQLSDEDIMEKLVKIRGIGPWTVQNVLLFGLGRPNLFPA
HHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
ADIGIQNAIKRHFGLNDKPTKEQMLEMSKEWHPYLSYASLYLWRSIE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWKETVSVTPPYHFDRVLDRLSLDPLNAVNLDKREVKLPLRNQNKEPRVVAVQATGTAEA
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEEECCCCCC
PAFAVSGIDDRDDMIKEVKRIFRWEESLQPVLDHFSQSSLSSIFEEHAGTPLVLDFHLYH
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
CLMKCIIHQQLNLSFAYTLTERFVHTFGEQKDGVWFYPLPETIAQLDYNDLRELQFSMRK
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHH
AEYVIDTSRMIADGRLDLDELDQLSDEDIMEKLVKIRGIGPWTVQNVLLFGLGRPNLFPA
HHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
ADIGIQNAIKRHFGLNDKPTKEQMLEMSKEWHPYLSYASLYLWRSIE
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]